Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0939
(812 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 52 6e-07
Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical pr... 51 9e-07
Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical pr... 51 9e-07
Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical pr... 51 9e-07
AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain... 51 9e-07
AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain... 51 9e-07
Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromat... 47 2e-05
U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical pr... 45 6e-05
U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical pr... 35 0.060
U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical pr... 35 0.060
AL032626-25|CAH10813.1| 406|Caenorhabditis elegans Hypothetical... 32 0.56
AL032626-24|CAA21530.1| 499|Caenorhabditis elegans Hypothetical... 32 0.56
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 31 0.98
AL032626-28|CAO82072.1| 337|Caenorhabditis elegans Hypothetical... 31 1.3
AL032626-8|CAA21528.1| 335|Caenorhabditis elegans Hypothetical ... 31 1.3
AF100307-4|AAC68931.2| 172|Caenorhabditis elegans Hypothetical ... 29 5.2
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 28 6.9
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 28 6.9
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 28 9.1
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 28 9.1
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/62 (40%), Positives = 36/62 (58%)
Frame = +3
Query: 255 DENAEYEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEPESNLNCSELIKKFMDKVSSA 434
D + Y VE ILE H KK GK EF I W G+ +SWEP+ N+ LI+ F + ++
Sbjct: 3 DGSELYTVESILE-HRKKKGKSEFYIKWLGYDHTHNSWEPKENIVDPTLIEAFFTREAAR 61
Query: 435 RS 440
++
Sbjct: 62 KA 63
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +1
Query: 1 ILDSKKIKGKLHYLIRWKGYSADSYTWEPEQTLSCPELIGKF 126
IL+ +K KGK + I+W GY +WEP++ + P LI F
Sbjct: 13 ILEHRKKKGKSEFYIKWLGYDHTHNSWEPKENIVDPTLIEAF 54
>Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical
protein K01G5.2c protein.
Length = 303
Score = 51.2 bits (117), Expect = 9e-07
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +3
Query: 270 YEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEPESNLNCSELIKKF 413
+ VE++L+ K G+ EFLI W+G+ SWEP NL C E++ +F
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 1 ILDSKKIK-GKLHYLIRWKGYSADSYTWEPEQTLSCPELIGKF 126
+LD + K G+ +LI+W+G+ +WEP + L C E++ +F
Sbjct: 24 VLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
>Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical
protein K01G5.2b protein.
Length = 301
Score = 51.2 bits (117), Expect = 9e-07
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +3
Query: 270 YEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEPESNLNCSELIKKF 413
+ VE++L+ K G+ EFLI W+G+ SWEP NL C E++ +F
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 1 ILDSKKIK-GKLHYLIRWKGYSADSYTWEPEQTLSCPELIGKF 126
+LD + K G+ +LI+W+G+ +WEP + L C E++ +F
Sbjct: 24 VLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
>Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical
protein K01G5.2a protein.
Length = 175
Score = 51.2 bits (117), Expect = 9e-07
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +3
Query: 270 YEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEPESNLNCSELIKKF 413
+ VE++L+ K G+ EFLI W+G+ SWEP NL C E++ +F
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 1 ILDSKKIK-GKLHYLIRWKGYSADSYTWEPEQTLSCPELIGKF 126
+LD + K G+ +LI+W+G+ +WEP + L C E++ +F
Sbjct: 24 VLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
>AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain
protein protein.
Length = 175
Score = 51.2 bits (117), Expect = 9e-07
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +3
Query: 270 YEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEPESNLNCSELIKKF 413
+ VE++L+ K G+ EFLI W+G+ SWEP NL C E++ +F
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 1 ILDSKKIK-GKLHYLIRWKGYSADSYTWEPEQTLSCPELIGKF 126
+LD + K G+ +LI+W+G+ +WEP + L C E++ +F
Sbjct: 24 VLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
>AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain
protein protein.
Length = 301
Score = 51.2 bits (117), Expect = 9e-07
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +3
Query: 270 YEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEPESNLNCSELIKKF 413
+ VE++L+ K G+ EFLI W+G+ SWEP NL C E++ +F
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 1 ILDSKKIK-GKLHYLIRWKGYSADSYTWEPEQTLSCPELIGKF 126
+LD + K G+ +LI+W+G+ +WEP + L C E++ +F
Sbjct: 24 VLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
>Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical
protein K08H2.6 protein.
Length = 184
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/80 (30%), Positives = 42/80 (52%)
Frame = +3
Query: 270 YEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEPESNLNCSELIKKFMDKVSSARSLDS 449
+ VE++L + G E+ I W+G+ SWEP NL C +I+++ +K ++ R+
Sbjct: 37 FVVEKVLNKRLTRGGS-EYYIKWQGFPESECSWEPIENLQCDRMIQEY-EKEAAKRTTRK 94
Query: 450 RNLRVAPETTNRFTLQDPSS 509
R P T++ LQ +S
Sbjct: 95 RRYSPQPSTSSSAELQPSTS 114
Score = 37.5 bits (83), Expect = 0.011
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +1
Query: 1 ILDSKKIKGKLHYLIRWKGYSADSYTWEPEQTLSCPELIGKF 126
+L+ + +G Y I+W+G+ +WEP + L C +I ++
Sbjct: 42 VLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQEY 83
>AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromatin
protein 1 homolog protein.
Length = 184
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/80 (30%), Positives = 42/80 (52%)
Frame = +3
Query: 270 YEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEPESNLNCSELIKKFMDKVSSARSLDS 449
+ VE++L + G E+ I W+G+ SWEP NL C +I+++ +K ++ R+
Sbjct: 37 FVVEKVLNKRLTRGGS-EYYIKWQGFPESECSWEPIENLQCDRMIQEY-EKEAAKRTTRK 94
Query: 450 RNLRVAPETTNRFTLQDPSS 509
R P T++ LQ +S
Sbjct: 95 RRYSPQPSTSSSAELQPSTS 114
Score = 37.5 bits (83), Expect = 0.011
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +1
Query: 1 ILDSKKIKGKLHYLIRWKGYSADSYTWEPEQTLSCPELIGKF 126
+L+ + +G Y I+W+G+ +WEP + L C +I ++
Sbjct: 42 VLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQEY 83
>U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical
protein T12E12.2 protein.
Length = 891
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +3
Query: 288 LEVHHKKNGKREFLIHWKGWSSKFDSWEPESNL-NCSELIKKFMDK 422
+E +++ K +L+HW+G+ K +WEPE NL NC EL +KF ++
Sbjct: 39 VEYDKRRHSKYAYLVHWRGYDWKERTWEPEENLENCEEL-QKFKER 83
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 13 KKIKGKLHYLIRWKGYSADSYTWEPEQTL-SCPEL 114
K+ K YL+ W+GY TWEPE+ L +C EL
Sbjct: 43 KRRHSKYAYLVHWRGYDWKERTWEPEENLENCEEL 77
>U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical
protein F32E10.2 protein.
Length = 270
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Frame = +3
Query: 255 DENAEYEVERILEVHHKKNGKREFLIHWKG-----WSSKFDSWEPESNLNCSELIKKF 413
D + EY VER+L H K G +L+ WKG W+S + WE + + NC +L+ +
Sbjct: 82 DSSGEYAVERVL-AHRKVKGSPLYLVQWKGYPHPVWNS--EMWEEDLD-NCKDLLAAY 135
Score = 32.7 bits (71), Expect = 0.32
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +1
Query: 1 ILDSKKIKGKLHYLIRWKGYSA---DSYTWEPEQTLSCPELIGKF 126
+L +K+KG YL++WKGY +S WE E +C +L+ +
Sbjct: 92 VLAHRKVKGSPLYLVQWKGYPHPVWNSEMWE-EDLDNCKDLLAAY 135
>Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical
protein T09A5.8 protein.
Length = 339
Score = 35.1 bits (77), Expect = 0.060
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 270 YEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEPESNLN--CSELIKKFMDKV 425
+EVE+IL H + + W G+ + D+WEPE +L SE++ ++ K+
Sbjct: 24 FEVEKIL-AHKVTDNLLVLQVRWLGYGADEDTWEPEEDLQECASEVVAEYYKKL 76
Score = 35.1 bits (77), Expect = 0.060
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 1 ILDSKKIKGKLHYLIRWKGYSADSYTWEPEQTL 99
IL K L +RW GY AD TWEPE+ L
Sbjct: 29 ILAHKVTDNLLVLQVRWLGYGADEDTWEPEEDL 61
>U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical
protein C29H12.5 protein.
Length = 706
Score = 35.1 bits (77), Expect = 0.060
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = +3
Query: 324 FLIHWKGWSSKFDSWEPESNLNCSELIKKFMDKVSSARSLDSRNLRVAPETTNR 485
FL+ W G+ +K +WEPESN+ S + ++ K + ++ NL+V+ T+R
Sbjct: 95 FLVKWLGYGNKEMTWEPESNIPDSVYLYEY--KKLNNMVMNRMNLKVSLTFTSR 146
Score = 30.3 bits (65), Expect = 1.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 37 YLIRWKGYSADSYTWEPEQTL 99
+L++W GY TWEPE +
Sbjct: 95 FLVKWLGYGNKEMTWEPESNI 115
>AL032626-25|CAH10813.1| 406|Caenorhabditis elegans Hypothetical
protein Y37D8A.11b protein.
Length = 406
Score = 31.9 bits (69), Expect = 0.56
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 285 ILEVHHKKNGKREFLIHWKGWSSKFDSWEP 374
I ++ K+GK + IH+KGW++++D P
Sbjct: 251 ITDIKPDKDGKECYCIHFKGWNNRYDEQIP 280
Score = 31.9 bits (69), Expect = 0.56
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 252 CDENAEYEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEP 374
C +N + I+++ +GK + +H+KGW+S++D P
Sbjct: 342 CTQNGKPYDAYIVDIITDTDGKDFYCVHFKGWNSRYDEKIP 382
Score = 29.9 bits (64), Expect = 2.3
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = +3
Query: 285 ILEVHHKKNGKREFLIHWKGWSSKFD 362
I+ + + + GK + +H+KGW+ ++D
Sbjct: 30 IIGIENNREGKECYCVHFKGWNCRYD 55
>AL032626-24|CAA21530.1| 499|Caenorhabditis elegans Hypothetical
protein Y37D8A.11a protein.
Length = 499
Score = 31.9 bits (69), Expect = 0.56
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 285 ILEVHHKKNGKREFLIHWKGWSSKFDSWEP 374
I ++ K+GK + IH+KGW++++D P
Sbjct: 344 ITDIKPDKDGKECYCIHFKGWNNRYDEQIP 373
Score = 31.9 bits (69), Expect = 0.56
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 252 CDENAEYEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEP 374
C +N + I+++ +GK + +H+KGW+S++D P
Sbjct: 435 CTQNGKPYDAYIVDIITDTDGKDFYCVHFKGWNSRYDEKIP 475
Score = 29.9 bits (64), Expect = 2.3
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = +3
Query: 285 ILEVHHKKNGKREFLIHWKGWSSKFD 362
I+ + + + GK + +H+KGW+ ++D
Sbjct: 30 IIGIENNREGKECYCVHFKGWNCRYD 55
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 31.1 bits (67), Expect = 0.98
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 315 KREFLIHWKGWSSKFDSWEPESNL 386
+++F + W GWS ++WE E++L
Sbjct: 236 EQQFFVKWTGWSHLHNTWESENSL 259
>AL032626-28|CAO82072.1| 337|Caenorhabditis elegans Hypothetical
protein Y37D8A.9b protein.
Length = 337
Score = 30.7 bits (66), Expect = 1.3
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = +3
Query: 282 RILEVHHKKNGKREFLIHWKGWSSKFDSWEP 374
+I ++ +GK + +H+KGW++++D P
Sbjct: 25 KITDIKTNSDGKELYCVHFKGWNNRYDEKIP 55
>AL032626-8|CAA21528.1| 335|Caenorhabditis elegans Hypothetical
protein Y37D8A.9a protein.
Length = 335
Score = 30.7 bits (66), Expect = 1.3
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = +3
Query: 282 RILEVHHKKNGKREFLIHWKGWSSKFDSWEP 374
+I ++ +GK + +H+KGW++++D P
Sbjct: 25 KITDIKTNSDGKELYCVHFKGWNNRYDEKIP 55
>AF100307-4|AAC68931.2| 172|Caenorhabditis elegans Hypothetical
protein T12B5.5 protein.
Length = 172
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 635 CFLIEYVNHRFNFNMKMTQFSFSCIFK*KPKYFFQSKISKCE 760
C IEY+ H F++K++ F K + +SK KC+
Sbjct: 80 CKRIEYLFHFEQFSIKVSDFPIEIAIKIRDDLLTRSKFQKCK 121
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 22 KGKLHYLIRWKGYSADSYTWEPEQT 96
K + YL++WK S D TWE + +
Sbjct: 502 KSQQDYLVKWKELSYDQATWERDDS 526
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 22 KGKLHYLIRWKGYSADSYTWEPEQT 96
K + YL++WK S D TWE + +
Sbjct: 502 KSQQDYLVKWKELSYDQATWERDDS 526
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 22 KGKLHYLIRWKGYSADSYTWEPEQT 96
K + YL++WK S + TWE + T
Sbjct: 514 KSQQDYLVKWKELSYEHATWERDDT 538
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 22 KGKLHYLIRWKGYSADSYTWEPEQT 96
K + YL++WK S + TWE + T
Sbjct: 514 KSQQDYLVKWKELSYEHATWERDDT 538
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 22 KGKLHYLIRWKGYSADSYTWEPEQT 96
K + YL++WK S + TWE + T
Sbjct: 514 KSQQDYLVKWKELSYEHATWERDDT 538
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,967,940
Number of Sequences: 27780
Number of extensions: 307509
Number of successful extensions: 845
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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