Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0938
         (708 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0959 - 21813756-21814097,21814462-21814570,21814688-218147...    29   2.7  
03_05_0625 - 26225201-26225879,26226706-26227553                       29   2.7  
05_01_0512 - 4259162-4259849,4260209-4260432,4260854-4261071,426...    29   3.6  
01_07_0228 - 42154400-42154498,42155120-42155196,42156341-421564...    29   3.6  
11_01_0650 - 5265106-5265305,5265972-5266049,5266391-5266544,526...    29   4.8  
07_03_1483 + 26881032-26882035,26882130-26882204,26882324-268828...    29   4.8  
08_02_1465 - 27319377-27319405,27319936-27320101,27320336-273204...    28   6.3  
06_03_0588 + 22567820-22570802,22570917-22571269                       28   8.4  

>10_08_0959 -
           21813756-21814097,21814462-21814570,21814688-21814740,
           21814849-21815049,21815320-21815433,21815513-21815671,
           21816490-21816849,21816928-21817149,21817967-21818093,
           21818887-21819023,21819169-21819292,21819665-21820174,
           21820255-21820436,21820812-21820862,21821114-21821266,
           21821339-21821437,21821519-21821861,21821957-21822030,
           21822105-21823025,21823133-21823257,21823419-21823461,
           21823574-21823762,21824814-21825074,21825228-21825387,
           21826200-21826363,21826523-21827009,21827090-21827431,
           21827519-21827836,21828001-21828041,21828136-21828388,
           21829158-21829261,21830198-21830386,21830543-21831196,
           21831320-21831610,21831739-21831882,21832107-21832205,
           21832549-21832657,21832739-21832923,21833008-21833121,
           21833270-21833401,21833483-21833815,21833945-21834436,
           21834773-21834847,21834917-21835066,21835143-21835241,
           21835463-21835547,21837188-21837375,21837513-21837647,
           21837729-21837849,21838127-21838194,21838275-21838370,
           21838450-21838554,21838665-21838980,21839053-21839142,
           21840011-21840181,21840850-21841010,21841088-21841270,
           21841839-21841940,21842515-21842632,21842704-21842798,
           21842972-21843022,21843107-21843241,21843333-21843436,
           21844249-21844414,21844649-21844773,21845220-21845316
          Length = 4181

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
 Frame = +3

Query: 357 RLILDDKKDCKIINKHDDLYMTLS------KDLDQNGDRDAYGDEDDHKNSWKFMSSG-N 515
           RL++DD +D K +++  D+ + L       K ++Q+ +   Y  ++  ++ W F  +G +
Sbjct: 478 RLVVDDNEDIKKLDRELDIEVILQWRMLAHKFVEQSAETHQYAQQNKQQSWWSFGWTGSS 537

Query: 516 RTEFISKSLT 545
           + E  SKS +
Sbjct: 538 KDEGDSKSFS 547


>03_05_0625 - 26225201-26225879,26226706-26227553
          Length = 508

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
 Frame = +3

Query: 306 WTTGHQNIVQSCFPLEFR----LILD-DKKDCKIINKHDDLYMTLSKDLDQNGDRDAYGD 470
           W   H+N + S FP + R    L+ D DKKD     K  D  +      D + D D  G+
Sbjct: 341 WVPKHENNLDSVFPRQTRRRWMLLQDLDKKDSTTFRKEHDEEIDFEWSSDGDDDSDHRGN 400

Query: 471 EDDHK 485
             +++
Sbjct: 401 VPEYR 405


>05_01_0512 -
           4259162-4259849,4260209-4260432,4260854-4261071,
           4261154-4261234,4261342-4262299
          Length = 722

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = +3

Query: 204 ATSIRTGWFVHHKEHSYELLNNAESNTINFSYKLWTTGHQNIVQS 338
           AT+++ G   HH   +  L N  E +  + S+K+W T H++ V+S
Sbjct: 522 ATTVQQG--EHHHRAATHLWN--ELDCFSSSFKIWVTAHKSYVES 562


>01_07_0228 -
           42154400-42154498,42155120-42155196,42156341-42156425,
           42156511-42156956,42157070-42157194,42157273-42157523
          Length = 360

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = +1

Query: 73  TTLSVIIATFFNMSVEASDSGKSDRKLYNSVITADYDDATKRCEQLQSEPDGSY 234
           TT+ V+I    NM +E+ +   SD K  N+V+  DY ++  +   + ++ DGS+
Sbjct: 4   TTVDVMIRKGTNMRLESYEF-LSDFKHGNAVVLLDYTESGNKGSFIVTQVDGSF 56


>11_01_0650 -
           5265106-5265305,5265972-5266049,5266391-5266544,
           5266635-5266701,5266723-5266796,5266910-5267794
          Length = 485

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 16/54 (29%), Positives = 23/54 (42%)
 Frame = +3

Query: 363 ILDDKKDCKIINKHDDLYMTLSKDLDQNGDRDAYGDEDDHKNSWKFMSSGNRTE 524
           I DD +D       DD   +   D D++ D D+Y D+DD          GN  +
Sbjct: 428 IFDDDEDEDEDRDGDDDEDSYEDDDDKDEDEDSYEDDDDEDEDEDSYEEGNEDD 481


>07_03_1483 +
           26881032-26882035,26882130-26882204,26882324-26882861,
           26883999-26884895,26885178-26885327,26885459-26885791,
           26886501-26886695,26887805-26887918
          Length = 1101

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 19/73 (26%), Positives = 38/73 (52%)
 Frame = +2

Query: 488 QLEVYVLWESNRVYFKIFNPKYNQRLKMGDPVKDDERKVFSSDDATDSTSQWYLQAMNXQ 667
           QL++Y++  +N  Y ++  P  ++ +++G  +KD +  V   ++  D T +  LQ  +  
Sbjct: 636 QLKLYLI--NN--YSRVVGPMLDKAIEVGI-LKDMDLSVLDEEEIVDCTDKHILQQASSV 690

Query: 668 GDLYFSYSIADTR 706
            DL+  Y    TR
Sbjct: 691 KDLFSGYPSVLTR 703


>08_02_1465 -
           27319377-27319405,27319936-27320101,27320336-27320444,
           27320865-27321448
          Length = 295

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 399 KHDDLYMTLSKDLDQNGDRDAYGDEDDHKNS 491
           KH DLY+  S+       RD+Y D+DDH  S
Sbjct: 219 KHPDLYLGKSEK-----GRDSYDDDDDHHES 244


>06_03_0588 + 22567820-22570802,22570917-22571269
          Length = 1111

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -2

Query: 506 GHKLPTVLMVVLVAICVSITILV*ILAQSHVQIVMLVNN 390
           GH LP +  ++L+    S +I V +L  SH+Q + L NN
Sbjct: 362 GHMLPNIQELILLNNKFSGSIPVSLLNASHLQKLSLANN 400


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,713,583
Number of Sequences: 37544
Number of extensions: 323614
Number of successful extensions: 822
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)