Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0938
         (708 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92786-6|CAB07208.1|  569|Caenorhabditis elegans Hypothetical pr...    33   0.26 
AF014940-4|AAB63936.2|  322|Caenorhabditis elegans Hypothetical ...    30   1.4  
AL132848-3|CAB60386.1|  327|Caenorhabditis elegans Hypothetical ...    29   2.5  
AC024809-5|AAF59544.3|  287|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z81592-4|CAB04728.1|  436|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z78200-3|CAB01580.1|  144|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z99942-9|CAB17073.3|  675|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AY652945-1|AAT73712.1|  675|Caenorhabditis elegans guanylate cyc...    27   9.9  
AL008867-4|CAD56232.2|  675|Caenorhabditis elegans Hypothetical ...    27   9.9  

>Z92786-6|CAB07208.1|  569|Caenorhabditis elegans Hypothetical
           protein F47H4.9 protein.
          Length = 569

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = +2

Query: 92  LRHFSICRLKQVILANPTENYTIQ*LPLTTMMQPKDASNFNPNR 223
           LR+F    L++++L +PT+N  I+   L  M Q K+A NF  +R
Sbjct: 431 LRNFKSGILQEIVLGSPTDNADIE--KLVDMRQWKEAKNFESSR 472


>AF014940-4|AAB63936.2|  322|Caenorhabditis elegans Hypothetical
           protein W02D7.6 protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +3

Query: 228 FVHHKEHSYELLNNAESNTINFSYKLWTTGHQN--IVQSC 341
           F HHK+H Y  LN+ E+  I   ++L   G+ N  IV+ C
Sbjct: 243 FGHHKDHRYRFLNDQETAII---FELADAGYSNPEIVKEC 279


>AL132848-3|CAB60386.1|  327|Caenorhabditis elegans Hypothetical
           protein Y47H10A.4 protein.
          Length = 327

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +1

Query: 100 FFNMSVEASDSGKSDRKLYNSVITADYDDATKRCEQLQSEPDGSYIIKNTVTSCLT 267
           FFN+++E  DSG+ +    N V   DY   TK  E  Q  PD  ++    + + LT
Sbjct: 41  FFNLNIEVPDSGQGEN---NMVSFLDYISQTKCLEDAQ--PD--FVTNKQILTALT 89


>AC024809-5|AAF59544.3|  287|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.5 protein.
          Length = 287

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 15/57 (26%), Positives = 27/57 (47%)
 Frame = -1

Query: 189 CIIVVSGNY*IV*FSVGFARITCFNRHIEKCRNYNRQSC*NLQFHLEFSLRFELLHP 19
           C+I ++ +  IV     F    CFNR++ +C    RQ   + Q H++  +   +  P
Sbjct: 122 CLICLASSPIIVTACDHFMHFACFNRYLTECLTGLRQEIQDAQKHMKEQVETNIFCP 178


>Z81592-4|CAB04728.1|  436|Caenorhabditis elegans Hypothetical
           protein T16G1.4 protein.
          Length = 436

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +2

Query: 503 VLWESNRVYFKIFNPKYNQRLKMGDPVKDDERKVFSSDDATDSTSQW 643
           +LWE N   F +      Q + MG+P +D  R +  +    D  + W
Sbjct: 284 ILWEENEGKFLVSKVIDYQLIHMGNPAEDLVRLLLCTLSGADRQAHW 330


>Z78200-3|CAB01580.1|  144|Caenorhabditis elegans Hypothetical
           protein T04H1.3 protein.
          Length = 144

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
 Frame = +1

Query: 157 NSVITADYDDATKRCEQLQS---EPDGSYIIKNTVTSCLTMPNLTQLISLTNY-GPLGTK 324
           + V+   YDD T    +L S     DG++ +  T T  LT+     +    NY GP   K
Sbjct: 45  SGVLVKMYDDGTIYDSKLGSTTTSSDGTFSVSGTYTDILTLDPKVNIYHSCNYNGPCSKK 104

Query: 325 I 327
           +
Sbjct: 105 V 105


>Z99942-9|CAB17073.3|  675|Caenorhabditis elegans Hypothetical
           protein C46E1.2 protein.
          Length = 675

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 17/48 (35%), Positives = 29/48 (60%)
 Frame = +3

Query: 294 SYKLWTTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMTLSKDL 437
           +YK+  T H + + S FP  + +++D  +DCKI+    +LY  + KDL
Sbjct: 214 NYKIRLT-HMDFI-STFP--YHMVVD--QDCKIVQVGRELYNHIPKDL 255


>AY652945-1|AAT73712.1|  675|Caenorhabditis elegans guanylate
           cyclase-like protein protein.
          Length = 675

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 17/48 (35%), Positives = 29/48 (60%)
 Frame = +3

Query: 294 SYKLWTTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMTLSKDL 437
           +YK+  T H + + S FP  + +++D  +DCKI+    +LY  + KDL
Sbjct: 214 NYKIRLT-HMDFI-STFP--YHMVVD--QDCKIVQVGRELYNHIPKDL 255


>AL008867-4|CAD56232.2|  675|Caenorhabditis elegans Hypothetical
           protein C46E1.2 protein.
          Length = 675

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 17/48 (35%), Positives = 29/48 (60%)
 Frame = +3

Query: 294 SYKLWTTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMTLSKDL 437
           +YK+  T H + + S FP  + +++D  +DCKI+    +LY  + KDL
Sbjct: 214 NYKIRLT-HMDFI-STFP--YHMVVD--QDCKIVQVGRELYNHIPKDL 255


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,217,322
Number of Sequences: 27780
Number of extensions: 318505
Number of successful extensions: 1006
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)