Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0936
         (786 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1415 + 30013398-30014548,30021401-30021552,30022596-30022624     29   5.5  
11_05_0010 - 18356835-18357080,18357475-18357672,18357780-183580...    28   9.7  

>06_03_1415 + 30013398-30014548,30021401-30021552,30022596-30022624
          Length = 443

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -1

Query: 780 WQPDCTKLLRK-HVILQNAFHGD 715
           W+PDCT  L   HV+   A HGD
Sbjct: 363 WRPDCTANLHDFHVVDNTAHHGD 385


>11_05_0010 -
           18356835-18357080,18357475-18357672,18357780-18358046,
           18358870-18359067,18359151-18359417,18359524-18359724,
           18359807-18361363,18361499-18361859,18362602-18363467
          Length = 1386

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -3

Query: 457 YF*SIINKCIFLLLS*DVHGKSQTCNSVNNKLK*IELLS 341
           YF  +IN+ +   +  DVHGK+Q C   +  L+ I  LS
Sbjct: 443 YFDELINRNLIQPICIDVHGKAQACRVHDTILEFIAGLS 481


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,524,986
Number of Sequences: 37544
Number of extensions: 246986
Number of successful extensions: 306
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 306
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)