Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0930
(813 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical ... 72 4e-13
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 71 1e-12
Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 45 6e-05
Z98851-1|CAB11539.2| 327|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical p... 31 1.3
AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein. 31 1.3
U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plu... 29 5.2
AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein. 29 5.2
AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein. 29 5.2
AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenase... 29 5.2
AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenase... 29 5.2
Z68160-3|CAA92291.1| 269|Caenorhabditis elegans Hypothetical pr... 28 9.1
>AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical
protein T27A1.5 protein.
Length = 449
Score = 72.1 bits (169), Expect = 4e-13
Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Frame = +2
Query: 23 QCVKLMIATAIFFTYSLQFYVPMEIIWNNV-RHWFGAKKNLAEYSIRIALIVMTVCIAIA 199
Q +K+M I +Y LQFYVPME + + R AK+ Y+IR +++T +A
Sbjct: 313 QAIKVMFVLCILVSYPLQFYVPMERVEKWIKRKVVEAKQEPMIYAIRFGGVLLTCAMAQL 372
Query: 200 IPDLGPFXXXXXXXXXXXXXXXFPAIMETVTFWDRPNGLGRFNWVLWKNVFMISFGILGF 379
IP L F FP ++E + + + L ++ W+ +N+ +++F ++GF
Sbjct: 373 IPHLALFISLVGSVAGTSLTLVFPPLIELLCSYSKQE-LTKWVWI--RNIGLMAFAMVGF 429
Query: 380 LTGSYVSIVEIIE 418
TG+Y S+V+IIE
Sbjct: 430 TTGTYASMVQIIE 442
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 70.5 bits (165), Expect = 1e-12
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Frame = +2
Query: 23 QCVKLMIATAIFFTYSLQFYVPMEIIWNNVRHWFGA-KKNLAEYSIRIALIVMTVCIAIA 199
Q +KLM I +Y LQFYVPME I + K+ L Y R + +++T IA
Sbjct: 323 QTIKLMFVACIMISYPLQFYVPMERIEKWITRKIPVDKQTLYIYIARYSGVILTCAIAEL 382
Query: 200 IPDLGPFXXXXXXXXXXXXXXXFPAIMETVTFWDRPNGLGRFNWVLWKNVFMISFGILGF 379
IP L F FP +E +T + + N L W+ KN+ +++F +GF
Sbjct: 383 IPHLALFISLIGAFSGASMALLFPPCIELLTSYAK-NELSTGLWI--KNIVLLTFAFIGF 439
Query: 380 LTGSYVSIVEI 412
TG+Y +++EI
Sbjct: 440 TTGTYSALIEI 450
>Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical
protein F59B2.2 protein.
Length = 460
Score = 49.2 bits (112), Expect = 3e-06
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 8/144 (5%)
Frame = +2
Query: 11 EKLGQCVKLMIATAIFFTYSLQFYVPMEIIWNNVRHWFGAK-----KNLAEYSIRIALIV 175
E L V + + S+ YV ++ +N R FGA+ K L++ R+ ++
Sbjct: 310 EGLYSTVNVFLMLQSLLGNSIAMYVVYDMFFNGFRRKFGARFPNVPKWLSDKGFRVFWVL 369
Query: 176 MTVCIAIAIPDLGPFXXXXXXXXXXXXXXXFPAIMETVTFWDRPNGLGRFNWVLWK---N 346
+T +A+ IP L FP E +TFW GL + + K N
Sbjct: 370 VTYLMAVLIPKLEIMIPLVGVTSGALCALIFPPFFEMITFWTDWKGLLTYRQRMTKIFIN 429
Query: 347 VFMISFGILGFLTGSYVSIVEIIE 418
+ +++ G+ + G Y +I II+
Sbjct: 430 LVVMAIGVFAIIAGVYTNIHAIIQ 453
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 45.2 bits (102), Expect = 6e-05
Identities = 30/136 (22%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Frame = +2
Query: 29 VKLMIATAIFFTYSLQFYVPMEIIWNNVRHWFGAKKNLAE----YSIRIALIVMTVCIAI 196
+K ++ IFF ++Q YV ++++ ++R + + Y++R+ L+++++CIA+
Sbjct: 342 IKGLLVLKIFFGSAIQLYVIVQMLLPSLRSKISEDRKMVHRLLPYALRLGLMLISLCIAL 401
Query: 197 AIPDLGPFXXXXXXXXXXXXXXXFPAIMETVTF---WDRPNGLGRFNWVLWKNVFMISFG 367
+P+L P+ ++ + F + + + +F L NVF+ G
Sbjct: 402 IVPNLMQIIPLVGITSGLLISLILPSFLDCMVFLPVFKKQGDMFKFYQKLIINVFLFVLG 461
Query: 368 ILGFLTGSYVSIVEII 415
G Y SI +II
Sbjct: 462 WFFLGAGLYSSIDDII 477
>Z98851-1|CAB11539.2| 327|Caenorhabditis elegans Hypothetical
protein H12I19.1 protein.
Length = 327
Score = 33.5 bits (73), Expect = 0.18
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +2
Query: 44 ATAIFFTYSLQFYVPMEIIWNNVRHWFGAKKNLAEYSIRIALIVMTVCIAIAIPDLGPF 220
AT IF S FY+P+ I + + AK++ E I IV+ +C +IAIP + F
Sbjct: 195 ATLIFIFTSAFFYIPIMISVRKLTNLTSAKQSNPEKYIFWQTIVIFICKSIAIPIIVDF 253
>Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical
protein T20G5.6 protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Frame = +2
Query: 29 VKLMIATAIFFTYSLQFYVPMEIIWNNV---------RHWFGAKKNLAEYSI--RIALIV 175
V L++ +Y L FY ++++ NN+ + K+L E+++ RI L++
Sbjct: 344 VNLILVVKALLSYPLPFYAAVQLLKNNLFLGYPQTPFTSCYSPDKSLREWAVTLRIILVL 403
Query: 176 MTVCIAIAIPDL 211
T+ +A+++P L
Sbjct: 404 FTLFVALSVPYL 415
>AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Frame = +2
Query: 29 VKLMIATAIFFTYSLQFYVPMEIIWNNV---------RHWFGAKKNLAEYSI--RIALIV 175
V L++ +Y L FY ++++ NN+ + K+L E+++ RI L++
Sbjct: 344 VNLILVVKALLSYPLPFYAAVQLLKNNLFLGYPQTPFTSCYSPDKSLREWAVTLRIILVL 403
Query: 176 MTVCIAIAIPDL 211
T+ +A+++P L
Sbjct: 404 FTLFVALSVPYL 415
>U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plus
homeodomain, axonguidance protein 1 protein.
Length = 596
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 133 EESCRIQHQDR-FDCDDGLHRYSYSGSWTIHFFSRGC 240
+E RI ++ F+C R+S+SGS++ H S+ C
Sbjct: 40 KEHIRIHSGEKPFECQQCHKRFSHSGSYSSHMSSKKC 76
>AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 133 EESCRIQHQDR-FDCDDGLHRYSYSGSWTIHFFSRGC 240
+E RI ++ F+C R+S+SGS++ H S+ C
Sbjct: 40 KEHIRIHSGEKPFECQQCHKRFSHSGSYSSHMSSKKC 76
>AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 133 EESCRIQHQDR-FDCDDGLHRYSYSGSWTIHFFSRGC 240
+E RI ++ F+C R+S+SGS++ H S+ C
Sbjct: 40 KEHIRIHSGEKPFECQQCHKRFSHSGSYSSHMSSKKC 76
>AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenases,
short chain protein2, isoform c protein.
Length = 343
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 98 IWNNVRHWFGAKKNLAEYSIRIALIVMTVCIAIAIPDLGPF 220
+W +R KK L + R+ + V ++C + +P LGP+
Sbjct: 160 LWGPIRTTMAVKKLLKKARGRV-VTVASICARVGLPGLGPY 199
>AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenases,
short chain protein2, isoform a protein.
Length = 368
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 98 IWNNVRHWFGAKKNLAEYSIRIALIVMTVCIAIAIPDLGPF 220
+W +R KK L + R+ + V ++C + +P LGP+
Sbjct: 185 LWGPIRTTMAVKKLLKKARGRV-VTVASICARVGLPGLGPY 224
>Z68160-3|CAA92291.1| 269|Caenorhabditis elegans Hypothetical
protein D1046.3 protein.
Length = 269
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 279 IIAGKINPRMISRTAPTKEMNGPRSGIAIAMQTVITIKAILMLYS 145
I AG P +++T NGP GI ++ V T + LYS
Sbjct: 194 IAAGLTTPLDVAKTRIMLTKNGPAPGILSTLKEVYTSNGVRGLYS 238
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,958,852
Number of Sequences: 27780
Number of extensions: 422025
Number of successful extensions: 1127
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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