Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0929
         (840 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1214 - 11583510-11583653,11585063-11585148,11585234-115853...    29   6.1  

>07_01_1214 -
           11583510-11583653,11585063-11585148,11585234-11585316,
           11585415-11585572,11587083-11587243,11588058-11588279,
           11588553-11588677,11589538-11589656,11589961-11590020,
           11590292-11590370,11591936-11592100,11592632-11592660,
           11593439-11593500,11594724-11594859,11594999-11595161,
           11595245-11595384,11597811-11597899,11598914-11599001,
           11599558-11599658,11599711-11599859,11600769-11600870,
           11601888-11601973,11602064-11602309
          Length = 930

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 629 VIDASCKLIAWSSCVCACVSNAWQ 700
           V  A+C L AW S  C  V+ AWQ
Sbjct: 451 VAAAACALRAWVSWTCCAVAVAWQ 474


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,686,751
Number of Sequences: 37544
Number of extensions: 333234
Number of successful extensions: 603
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)