Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0928
         (590 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0058 - 3704138-3704257,3704355-3704421,3704502-3704641,370...   104   5e-23
02_05_1256 - 35281926-35282635,35282711-35283112,35283508-35283814     29   2.1  
08_02_1571 - 27935756-27935950,27936048-27936199,27936294-279364...    28   6.4  

>09_02_0058 -
           3704138-3704257,3704355-3704421,3704502-3704641,
           3705332-3705424,3705927-3706109,3706491-3706595,
           3706738-3706818,3706905-3707046,3707207-3707286,
           3707456-3707568,3708051-3708297,3708659-3709051
          Length = 587

 Score =  104 bits (250), Expect = 5e-23
 Identities = 55/76 (72%), Positives = 59/76 (77%)
 Frame = +3

Query: 255 TIALALGVERTKSELIPFLTETIYXEDEVLLALAEQLGSFINLVGGGEFAHCLLPPLETL 434
           TIA ALG ERT+ ELIPFL+E    EDEVLLA+AE+LG FI  VGG E AH LLPPLETL
Sbjct: 35  TIARALGEERTRKELIPFLSENNDDEDEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETL 94

Query: 435 AAVEETVVRDKAVASL 482
             VEET VRDKAV SL
Sbjct: 95  CTVEETCVRDKAVESL 110



 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +1

Query: 166 DESLYPIAVLIDELKNEDVQLRLNSIXKLS 255
           DE LYPIA+LIDELKNED+QLRLNSI +LS
Sbjct: 5   DEPLYPIAILIDELKNEDIQLRLNSIRRLS 34


>02_05_1256 - 35281926-35282635,35282711-35283112,35283508-35283814
          Length = 472

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -2

Query: 529 KVFLECLGLWCSATARSEATALSRTTVSSTAANVSRGGRRQ 407
           K     +GLW S+ + S +++ S    S++ +N  R  RR+
Sbjct: 53  KSLFRTIGLWFSSLSTSSSSSSSAAATSASGSNAKRRSRRE 93


>08_02_1571 -
           27935756-27935950,27936048-27936199,27936294-27936403,
           27936845-27937050,27937212-27937295,27937367-27937525,
           27937621-27937728,27938103-27938278,27938376-27938462,
           27938546-27938657,27938737-27938817,27938890-27938943,
           27939107-27939183,27939262-27939331,27939552-27939666,
           27939840-27939937,27940041-27940179,27940267-27940868,
           27941270-27941399,27941471-27941529
          Length = 937

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +3

Query: 405 HCLLPP-LETLAAVEETVVRDKAVASLRAVAEHHSPKHSRNTL 530
           HC +   L+  +A+E     +  +AS RA AE H+   S++ L
Sbjct: 776 HCRMETILQEWSAIETNEQHEAEIASSRATAEEHASNSSKDLL 818


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,552,904
Number of Sequences: 37544
Number of extensions: 234778
Number of successful extensions: 874
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)