BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0928
(590 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 25 2.4
AY062432-1|AAL47188.1| 391|Anopheles gambiae putative odorant r... 24 4.2
Z22930-4|CAA80516.1| 267|Anopheles gambiae Trypsinogen precurso... 23 7.4
AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant r... 23 7.4
DQ437579-1|ABD96049.1| 575|Anopheles gambiae short neuropeptide... 23 9.8
AY028786-1|AAK32960.1| 501|Anopheles gambiae cytochrome P450 pr... 23 9.8
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 23 9.8
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
promoter protein.
Length = 1197
Score = 24.6 bits (51), Expect = 2.4
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -2
Query: 493 ATARSEATALSRTTVSSTAANVSRGGRRQCANSPP 389
A R ++ +LS ++ S + S GGR PP
Sbjct: 988 AVVRPQSLSLSMNSMGSDNSEQSSGGRLSSGGGPP 1022
>AY062432-1|AAL47188.1| 391|Anopheles gambiae putative odorant
receptor Or5 protein.
Length = 391
Score = 23.8 bits (49), Expect = 4.2
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 523 FLECLGLWCSATARSEATALS 461
F++C+ +WCS T LS
Sbjct: 271 FIQCVMIWCSLVLYVAVTGLS 291
>Z22930-4|CAA80516.1| 267|Anopheles gambiae Trypsinogen precursor
of ANTRYP7 protein.
Length = 267
Score = 23.0 bits (47), Expect = 7.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 588 ADVLESEPVSSQQGAVTSGTKCSSSAWG 505
+DV++ + Q AV +GT S WG
Sbjct: 140 SDVVQPVALPEQDEAVDAGTMTIVSGWG 167
>AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant
receptor Or3 protein.
Length = 411
Score = 23.0 bits (47), Expect = 7.4
Identities = 8/26 (30%), Positives = 12/26 (46%)
Frame = -2
Query: 523 FLECLGLWCSATARSEATALSRTTVS 446
F++C +WCS T S T +
Sbjct: 290 FIQCTMIWCSLILYIAVTGFSSTVAN 315
>DQ437579-1|ABD96049.1| 575|Anopheles gambiae short neuropeptide F
receptor protein.
Length = 575
Score = 22.6 bits (46), Expect = 9.8
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 148 LPFXSIELCLDFNSKYTHSNF-NDNFFV*NLS 56
LP + +C DFNS F N FF+ +L+
Sbjct: 337 LPLNVVNMCNDFNSDINSWRFYNLIFFIAHLT 368
>AY028786-1|AAK32960.1| 501|Anopheles gambiae cytochrome P450
protein.
Length = 501
Score = 22.6 bits (46), Expect = 9.8
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +3
Query: 447 ETVVRDKAVASLRAVAEHHSPKHSRN 524
+ V+++ +A++ A HH P+H N
Sbjct: 388 DKVLQEGIMAAIPVYALHHDPEHFPN 413
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 22.6 bits (46), Expect = 9.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -2
Query: 130 ELCLDFNSKYTHSNFND 80
E LD N +YTHS D
Sbjct: 328 ECHLDHNGRYTHSTTQD 344
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,852
Number of Sequences: 2352
Number of extensions: 8595
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -