Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0927
         (792 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   6.5  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   6.5  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   8.5  

>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 638 STP*TRPYGFIRFNNLC 688
           S P T+ YG + FN +C
Sbjct: 284 SGPYTKGYGVMGFNEIC 300


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 47  IFGTTVLGLGCALK 6
           IFG  V+GL C LK
Sbjct: 75  IFGAFVMGLFCILK 88


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 713 VLEAEGL*CKGY*I**IRKDVSRASTVTGSCMI 615
           V   EG  CKG+    +RKD+S A     +C+I
Sbjct: 100 VYSCEG--CKGFFKRTVRKDLSYACREEKNCII 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,392
Number of Sequences: 336
Number of extensions: 3773
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)