Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0927
(792 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 72 8e-13
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 72 8e-13
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 69 6e-12
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 66 4e-11
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 66 4e-11
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 65 9e-11
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 63 4e-10
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 63 4e-10
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 55 1e-07
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 34 0.19
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 34 0.19
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 34 0.19
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 34 0.19
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 34 0.19
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 34 0.19
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 33 0.59
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 33 0.59
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 33 0.59
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 33 0.59
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 31 1.4
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 72.1 bits (169), Expect = 8e-13
Identities = 31/73 (42%), Positives = 50/73 (68%)
Frame = +1
Query: 283 LYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGA 462
L+ +I RS +SL K LY + ++P+ TY S ++ +A+R++ID +Q QSR R+ GA
Sbjct: 767 LHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGA 826
Query: 463 PWFVRNVDLHDDL 501
PW++RN ++H DL
Sbjct: 827 PWYLRNENIHRDL 839
Score = 41.1 bits (92), Expect = 0.002
Identities = 27/81 (33%), Positives = 36/81 (44%)
Frame = +2
Query: 8 SERXLALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWAR 187
S ++ +W WRI IN K V F PP+ L IP A
Sbjct: 686 SRHLTSVERWLADWRISINVQKCKQVTFTLNK-----------QTCPPLVLNNICIPQAD 734
Query: 188 KVKYLGVTLDASMTFRPHIKS 250
+V YLGV LD +T+R HI++
Sbjct: 735 EVTYLGVHLDRRLTWRKHIEA 755
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 72.1 bits (169), Expect = 8e-13
Identities = 31/73 (42%), Positives = 50/73 (68%)
Frame = +1
Query: 283 LYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGA 462
L+ +I RS +SL K LY + ++P+ TY S ++ +A+R++ID +Q QSR R+ GA
Sbjct: 767 LHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGA 826
Query: 463 PWFVRNVDLHDDL 501
PW++RN ++H DL
Sbjct: 827 PWYLRNENIHRDL 839
Score = 41.1 bits (92), Expect = 0.002
Identities = 27/81 (33%), Positives = 36/81 (44%)
Frame = +2
Query: 8 SERXLALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWAR 187
S ++ +W WRI IN K V F PP+ L IP A
Sbjct: 686 SRHLTSVERWLADWRISINVQKCKQVTFTLNK-----------QTCPPLVLNNICIPQAD 734
Query: 188 KVKYLGVTLDASMTFRPHIKS 250
+V YLGV LD +T+R HI++
Sbjct: 735 EVTYLGVHLDRRLTWRKHIEA 755
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 69.3 bits (162), Expect = 6e-12
Identities = 31/74 (41%), Positives = 45/74 (60%)
Frame = +1
Query: 286 YPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAP 465
Y ++ RSK+SL NK+T+YK + P Y ++ A +HI +Q++Q++ RL G
Sbjct: 777 YWLLSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCE 836
Query: 466 WFVRNVDLHDDLGL 507
WFVRN LH DL L
Sbjct: 837 WFVRNTTLHRDLKL 850
Score = 46.8 bits (106), Expect = 3e-05
Identities = 25/76 (32%), Positives = 34/76 (44%)
Frame = +2
Query: 32 QWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVT 211
+W R+W I IN +KS V F PP+ + P+P KYLGV
Sbjct: 703 EWARRWNIGINSSKSNNVCFTLKR-----------RTPPPVYIEEVPVPQPNAAKYLGVL 751
Query: 212 LDASMTFRPHIKSVLT 259
LD +TF H+ + T
Sbjct: 752 LDRRLTFSKHVTDIRT 767
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 66.5 bits (155), Expect = 4e-11
Identities = 28/81 (34%), Positives = 49/81 (60%)
Frame = +1
Query: 271 ILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRL 450
I+ LYP+I ++SK+S+ NK+ ++KT P++ Y S V+ A+THI LQ Q++ +L
Sbjct: 797 IICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKL 856
Query: 451 AVGAPWFVRNVDLHDDLGLDQ 513
+ P++ LH G+ +
Sbjct: 857 IMNLPYYTNTKYLHIKAGVQK 877
Score = 45.2 bits (102), Expect = 1e-04
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +2
Query: 35 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTL 214
+++KW+I INP K+ A+ F + + PI W ++YLG+
Sbjct: 725 YYKKWKIKINPNKTNAIFFTKRRKPRYLPDRQ-------LRILDSPIQWVDNIRYLGIIF 777
Query: 215 DASMTFRPHIKSVL 256
D +TF+ HI + +
Sbjct: 778 DKKLTFKYHINNTI 791
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 66.5 bits (155), Expect = 4e-11
Identities = 28/81 (34%), Positives = 49/81 (60%)
Frame = +1
Query: 271 ILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRL 450
I+ LYP+I ++SK+S+ NK+ ++KT P++ Y S V+ A+THI LQ Q++ +L
Sbjct: 745 IICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKL 804
Query: 451 AVGAPWFVRNVDLHDDLGLDQ 513
+ P++ LH G+ +
Sbjct: 805 IMNLPYYTNTKYLHIKAGVQK 825
Score = 45.2 bits (102), Expect = 1e-04
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +2
Query: 35 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTL 214
+++KW+I INP K+ A+ F + + PI W ++YLG+
Sbjct: 673 YYKKWKIKINPNKTNAIFFTKRRKPRYLPDRQ-------LRILDSPIQWVDNIRYLGIIF 725
Query: 215 DASMTFRPHIKSVL 256
D +TF+ HI + +
Sbjct: 726 DKKLTFKYHINNTI 739
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 65.3 bits (152), Expect = 9e-11
Identities = 29/80 (36%), Positives = 50/80 (62%)
Frame = +1
Query: 283 LYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGA 462
L+ +I S +SL +KV LY + ++P+ TY S ++ +A+ ++ID +Q QS+ R GA
Sbjct: 769 LHWLINSGSPLSLDHKVLLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGA 828
Query: 463 PWFVRNVDLHDDLGLDQFGN 522
PW+VR+ ++ DL + N
Sbjct: 829 PWYVRSENIQRDLNIPSVTN 848
Score = 41.5 bits (93), Expect = 0.001
Identities = 27/80 (33%), Positives = 37/80 (46%)
Frame = +2
Query: 32 QWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVT 211
+W WRI +N K V F PP+ L P+P A +V YLGV
Sbjct: 696 KWLSDWRIKVNEQKCKHVTFTLNRQDC-----------PPLLLNSIPLPKADEVTYLGVH 744
Query: 212 LDASMTFRPHIKSVLTVPRL 271
LD +T+R HI++ T +L
Sbjct: 745 LDRRLTWRRHIEAKKTQLKL 764
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 63.3 bits (147), Expect = 4e-10
Identities = 28/83 (33%), Positives = 52/83 (62%)
Frame = +1
Query: 274 LGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLA 453
+ R+ +I R+K+SL KV +YK+ + P + Y V+ AA++H++ ++ LQ++ R
Sbjct: 778 VARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRI 837
Query: 454 VGAPWFVRNVDLHDDLGLDQFGN 522
GAPW++R D+ DL + + G+
Sbjct: 838 SGAPWYMRTRDIERDLKVPKLGD 860
Score = 34.7 bits (76), Expect = 0.15
Identities = 23/77 (29%), Positives = 32/77 (41%)
Frame = +2
Query: 23 ALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYL 202
A QW W + IN K V F P ++L + I + KYL
Sbjct: 705 AFQQWAENWNVRINAEKCANVTFANRTGSC-----------PGVSLNGRLIRHHQAYKYL 753
Query: 203 GVTLDASMTFRPHIKSV 253
G+TLD +TF HI ++
Sbjct: 754 GITLDRKLTFSRHITNI 770
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 63.3 bits (147), Expect = 4e-10
Identities = 28/83 (33%), Positives = 52/83 (62%)
Frame = +1
Query: 274 LGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLA 453
+ R+ +I R+K+SL KV +YK+ + P + Y V+ AA++H++ ++ LQ++ R
Sbjct: 580 VARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRI 639
Query: 454 VGAPWFVRNVDLHDDLGLDQFGN 522
GAPW++R D+ DL + + G+
Sbjct: 640 SGAPWYMRTRDIERDLKVPKLGD 662
Score = 34.7 bits (76), Expect = 0.15
Identities = 23/77 (29%), Positives = 32/77 (41%)
Frame = +2
Query: 23 ALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYL 202
A QW W + IN K V F P ++L + I + KYL
Sbjct: 507 AFQQWAENWNVRINAEKCANVTFANRTGSC-----------PGVSLNGRLIRHHQAYKYL 555
Query: 203 GVTLDASMTFRPHIKSV 253
G+TLD +TF HI ++
Sbjct: 556 GITLDRKLTFSRHITNI 572
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 55.2 bits (127), Expect = 1e-07
Identities = 32/109 (29%), Positives = 55/109 (50%)
Frame = +1
Query: 235 PAYKISPDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHID 414
P K + R + +L ++ ++S M+LR K +Y C+ P+ Y ++ AA+++ +
Sbjct: 766 PHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYN 825
Query: 415 TLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLDQFGNT*SQRRNDTSIRL 561
+Q LQ+R R P++VR LH DL L S+ + S RL
Sbjct: 826 RIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQISRHTSRYSDRL 874
Score = 41.1 bits (92), Expect = 0.002
Identities = 24/80 (30%), Positives = 36/80 (45%)
Frame = +2
Query: 11 ERXLALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARK 190
E L W ++W + +NP K+ F +T PI L + +
Sbjct: 700 EYLTTLAAWCKRWILKVNPQKTINPCFTLKTLSP---------VTAPIELEGVILDQPSQ 750
Query: 191 VKYLGVTLDASMTFRPHIKS 250
KYLG+TLD +TF PH+K+
Sbjct: 751 AKYLGITLDKRLTFGPHLKA 770
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 34.3 bits (75), Expect = 0.19
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +2
Query: 35 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTL 214
W KW I +N AK+ V++ NL + + Q I K YLGV L
Sbjct: 637 WADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVIL 688
Query: 215 DASMTFRPHIKSVL 256
D+ +T PH+ V+
Sbjct: 689 DSKLTLSPHVTKVV 702
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 34.3 bits (75), Expect = 0.19
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = +2
Query: 35 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTL 214
W KW I +N AK+ V+F + + Q I K YLGVTL
Sbjct: 765 WADKWGISVNAAKTGHVIFTLKNDLPTNSMN--------VKIKGQTIKKESKQSYLGVTL 816
Query: 215 DASMTFRPHIKSVL 256
D+ +T H+ +L
Sbjct: 817 DSKLTLSSHVTKLL 830
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 34.3 bits (75), Expect = 0.19
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +2
Query: 35 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTL 214
W KW I +N AK+ V++ NL + + Q I K YLGV L
Sbjct: 753 WADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVIL 804
Query: 215 DASMTFRPHIKSVL 256
D+ +T PH+ V+
Sbjct: 805 DSKLTLSPHVTKVV 818
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 34.3 bits (75), Expect = 0.19
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +2
Query: 35 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTL 214
W KW I +N AK+ V++ NL + + Q I K YLGV L
Sbjct: 753 WADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVIL 804
Query: 215 DASMTFRPHIKSVL 256
D+ +T PH+ V+
Sbjct: 805 DSKLTLSPHVTKVV 818
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 34.3 bits (75), Expect = 0.19
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +2
Query: 35 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTL 214
W KW I +N AK+ V++ NL + + Q I K YLGV L
Sbjct: 715 WADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVIL 766
Query: 215 DASMTFRPHIKSVL 256
D+ +T PH+ V+
Sbjct: 767 DSKLTLSPHVTKVV 780
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 34.3 bits (75), Expect = 0.19
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +2
Query: 35 WFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTL 214
W KW I +N AK+ V++ NL + + Q I K YLGV L
Sbjct: 753 WADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVIL 804
Query: 215 DASMTFRPHIKSVL 256
D+ +T PH+ V+
Sbjct: 805 DSKLTLSPHVTKVV 818
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 32.7 bits (71), Expect = 0.59
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = +2
Query: 32 QWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVT 211
+W +KW I IN K+ +LF TPP+ + Q K +YLG+
Sbjct: 316 RWSKKWDIAINAKKTGHILFSLKKEQTNI-------YTPPL-INGQRAAKLNKQRYLGLM 367
Query: 212 LDASMTFRPHI 244
LD +TF H+
Sbjct: 368 LDRRLTFCAHM 378
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 32.7 bits (71), Expect = 0.59
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = +2
Query: 32 QWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVT 211
+W +KW I IN K+ +LF TPP+ + Q K +YLG+
Sbjct: 763 RWSKKWDIAINAKKTGHILFSLKKEQTNI-------YTPPL-INGQRAAKLNKQRYLGLM 814
Query: 212 LDASMTFRPHI 244
LD +TF H+
Sbjct: 815 LDRRLTFCAHM 825
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 32.7 bits (71), Expect = 0.59
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = +2
Query: 32 QWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVT 211
+W +KW I IN K+ +LF TPP+ + Q K +YLG+
Sbjct: 763 RWSKKWDIAINAKKTGHILFSLKKEQTNI-------YTPPL-INGQRAAKLNKQRYLGLM 814
Query: 212 LDASMTFRPHI 244
LD +TF H+
Sbjct: 815 LDRRLTFCAHM 825
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 32.7 bits (71), Expect = 0.59
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = +2
Query: 32 QWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVT 211
+W +KW I IN K+ +LF TPP+ + Q K +YLG+
Sbjct: 763 RWSKKWDIAINAKKTGHILFSLKKEQTNI-------YTPPL-INGQRAAKLNKQRYLGLM 814
Query: 212 LDASMTFRPHI 244
LD +TF H+
Sbjct: 815 LDRRLTFCAHM 825
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 31.5 bits (68), Expect = 1.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 146 PPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSV 253
P + + +P+ R +YLG+T+ M F HI S+
Sbjct: 719 PTVRFAGRNLPYVRSCRYLGITVSEGMKFLTHIASL 754
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,673,075
Number of Sequences: 53049
Number of extensions: 758772
Number of successful extensions: 1750
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1739
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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