Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0926
(753 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 180 4e-45
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 180 4e-45
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 180 4e-45
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 178 2e-44
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 176 8e-44
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 92 2e-18
AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5 pr... 91 5e-18
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr... 34 0.48
BC033856-1|AAH33856.1| 283|Homo sapiens LARP1 protein protein. 32 2.5
BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein do... 32 2.5
AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein. 32 2.5
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai... 31 4.5
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai... 31 4.5
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein. 31 4.5
M83664-1|AAA59837.1| 258|Homo sapiens HLA-DPB1 protein. 30 7.8
M28200-1|AAA53195.1| 258|Homo sapiens MHC class II lymphocyte a... 30 7.8
BT019780-1|AAV38583.1| 258|Homo sapiens major histocompatibilit... 30 7.8
BC130304-1|AAI30305.1| 1125|Homo sapiens exportin 6 protein. 30 7.8
BC108286-1|AAI08287.1| 941|Homo sapiens XPO6 protein protein. 30 7.8
BC078674-1|AAH78674.1| 956|Homo sapiens XPO6 protein protein. 30 7.8
BC014071-1|AAH14071.2| 888|Homo sapiens XPO6 protein protein. 30 7.8
BC013184-1|AAH13184.1| 258|Homo sapiens HLA-DPB1 protein protein. 30 7.8
BC004403-1|AAH04403.1| 888|Homo sapiens XPO6 protein protein. 30 7.8
AY804143-1|AAW78748.1| 258|Homo sapiens MHC class II antigen pr... 30 7.8
AY804133-1|AAW78738.1| 258|Homo sapiens MHC class II antigen pr... 30 7.8
AY026388-1|AAK01471.1| 1125|Homo sapiens exportin 6 protein. 30 7.8
AB002368-1|BAA20825.3| 1132|Homo sapiens KIAA0370 protein protein. 30 7.8
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 180 bits (439), Expect = 4e-45
Identities = 97/151 (64%), Positives = 103/151 (68%)
Frame = +2
Query: 257 GRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLV 436
GRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV
Sbjct: 54 GRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLV 113
Query: 437 TAIINSGPREDSTRIGRAGTVRRQPLMFHPCAESTKQSGFCAQVHVRLHSEILKQSQSVL 616
AIINSGPREDSTRIGRAGTVRRQ + P + +K L
Sbjct: 114 NAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECL 173
Query: 617 QMN*LMQLRVHLTPTPSKKKDELERVAKSNR 709
+ + KKKDELERVAKSNR
Sbjct: 174 ADELINAAKGSSNSYAIKKKDELERVAKSNR 204
Score = 112 bits (269), Expect = 1e-24
Identities = 53/55 (96%), Positives = 55/55 (100%)
Frame = +1
Query: 511 VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKE 675
VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKK+
Sbjct: 139 VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 193
Score = 77.0 bits (181), Expect = 7e-14
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +3
Query: 123 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSLAGMHTS 275
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHS AG + +
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHS-AGRYAA 58
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 180 bits (439), Expect = 4e-45
Identities = 97/151 (64%), Positives = 103/151 (68%)
Frame = +2
Query: 257 GRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLV 436
GRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV
Sbjct: 54 GRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLV 113
Query: 437 TAIINSGPREDSTRIGRAGTVRRQPLMFHPCAESTKQSGFCAQVHVRLHSEILKQSQSVL 616
AIINSGPREDSTRIGRAGTVRRQ + P + +K L
Sbjct: 114 NAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECL 173
Query: 617 QMN*LMQLRVHLTPTPSKKKDELERVAKSNR 709
+ + KKKDELERVAKSNR
Sbjct: 174 ADELINAAKGSSNSYAIKKKDELERVAKSNR 204
Score = 112 bits (269), Expect = 1e-24
Identities = 53/55 (96%), Positives = 55/55 (100%)
Frame = +1
Query: 511 VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKE 675
VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKK+
Sbjct: 139 VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 193
Score = 77.0 bits (181), Expect = 7e-14
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +3
Query: 123 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSLAGMHTS 275
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHS AG + +
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHS-AGRYAA 58
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 180 bits (439), Expect = 4e-45
Identities = 97/151 (64%), Positives = 103/151 (68%)
Frame = +2
Query: 257 GRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLV 436
GRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV
Sbjct: 54 GRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLV 113
Query: 437 TAIINSGPREDSTRIGRAGTVRRQPLMFHPCAESTKQSGFCAQVHVRLHSEILKQSQSVL 616
AIINSGPREDSTRIGRAGTVRRQ + P + +K L
Sbjct: 114 NAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECL 173
Query: 617 QMN*LMQLRVHLTPTPSKKKDELERVAKSNR 709
+ + KKKDELERVAKSNR
Sbjct: 174 ADELINAAKGSSNSYAIKKKDELERVAKSNR 204
Score = 112 bits (269), Expect = 1e-24
Identities = 53/55 (96%), Positives = 55/55 (100%)
Frame = +1
Query: 511 VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKE 675
VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKK+
Sbjct: 139 VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 193
Score = 77.0 bits (181), Expect = 7e-14
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +3
Query: 123 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSLAGMHTS 275
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHS AG + +
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHS-AGRYAA 58
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 178 bits (433), Expect = 2e-44
Identities = 96/151 (63%), Positives = 103/151 (68%)
Frame = +2
Query: 257 GRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLV 436
GRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV
Sbjct: 54 GRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLV 113
Query: 437 TAIINSGPREDSTRIGRAGTVRRQPLMFHPCAESTKQSGFCAQVHVRLHSEILKQSQSVL 616
AIINSGPREDSTRIGRAGTVRRQ + P + +K L
Sbjct: 114 NAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECL 173
Query: 617 QMN*LMQLRVHLTPTPSKKKDELERVAKSNR 709
+ + KK+DELERVAKSNR
Sbjct: 174 ADELINAAKGSSNFYAIKKRDELERVAKSNR 204
Score = 109 bits (262), Expect = 1e-23
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 511 VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKK 672
VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSN YAIKK
Sbjct: 139 VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNFYAIKK 192
Score = 77.0 bits (181), Expect = 7e-14
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +3
Query: 123 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSLAGMHTS 275
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHS AG + +
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHS-AGRYAA 58
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 176 bits (428), Expect = 8e-44
Identities = 95/151 (62%), Positives = 101/151 (66%)
Frame = +2
Query: 257 GRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLV 436
GRYA FRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV
Sbjct: 54 GRYAANAFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLV 113
Query: 437 TAIINSGPREDSTRIGRAGTVRRQPLMFHPCAESTKQSGFCAQVHVRLHSEILKQSQSVL 616
AIINSGPREDSTRIGRAGTVRRQ + P + +K L
Sbjct: 114 NAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECL 173
Query: 617 QMN*LMQLRVHLTPTPSKKKDELERVAKSNR 709
+ + KKKDELERVAKSNR
Sbjct: 174 ADELINAAKGSSNSYAIKKKDELERVAKSNR 204
Score = 112 bits (269), Expect = 1e-24
Identities = 53/55 (96%), Positives = 55/55 (100%)
Frame = +1
Query: 511 VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKE 675
VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKK+
Sbjct: 139 VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 193
Score = 77.0 bits (181), Expect = 7e-14
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +3
Query: 123 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSLAGMHTS 275
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHS AG + +
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHS-AGRYAA 58
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 92.3 bits (219), Expect = 2e-18
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +2
Query: 287 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 442
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5
protein.
Length = 55
Score = 90.6 bits (215), Expect = 5e-18
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = +1
Query: 544 AIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKE 675
AIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKK+
Sbjct: 1 AIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 44
Score = 31.5 bits (68), Expect = 3.4
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 668 KKKDELERVAKSNR 709
KKKDELERVAKSNR
Sbjct: 42 KKKDELERVAKSNR 55
>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
protein.
Length = 1640
Score = 34.3 bits (75), Expect = 0.48
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 350 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 258
C C + ++ E G R G G YG AC H C
Sbjct: 1423 CSCHNNSTCEPATGTCRCGPGFYGQACEHPC 1453
>BC033856-1|AAH33856.1| 283|Homo sapiens LARP1 protein protein.
Length = 283
Score = 31.9 bits (69), Expect = 2.5
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 437 TAIINSGPREDSTRIGRAG-TVRRQPLMFHPCAESTKQSGFCAQVHVRLHSEILKQ 601
TA I+S P E + +G G T + P HP E K++GF V+ + L +
Sbjct: 32 TASISSSPSEGTPTVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNE 87
>BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein
domain family, member 1 protein.
Length = 1019
Score = 31.9 bits (69), Expect = 2.5
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 437 TAIINSGPREDSTRIGRAG-TVRRQPLMFHPCAESTKQSGFCAQVHVRLHSEILKQ 601
TA I+S P E + +G G T + P HP E K++GF V+ + L +
Sbjct: 768 TASISSSPSEGTPTVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNE 823
>AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein.
Length = 1096
Score = 31.9 bits (69), Expect = 2.5
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 437 TAIINSGPREDSTRIGRAG-TVRRQPLMFHPCAESTKQSGFCAQVHVRLHSEILKQ 601
TA I+S P E + +G G T + P HP E K++GF V+ + L +
Sbjct: 845 TASISSSPSEGTPTVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNE 900
>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 350 CHCSDRASLESL*GAPRLGTGLYGNACVH 264
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 350 CHCSDRASLESL*GAPRLGTGLYGNACVH 264
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
Length = 1246
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 350 CHCSDRASLESL*GAPRLGTGLYGNACVH 264
C C + ++ E G R G G YG AC H
Sbjct: 1130 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1158
>M83664-1|AAA59837.1| 258|Homo sapiens HLA-DPB1 protein.
Length = 258
Score = 30.3 bits (65), Expect = 7.8
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +3
Query: 81 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSL 257
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++ S
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF--DSD 70
Query: 258 AGMHTSVSV--KPSAQSWSA 311
G +V+ +P+A+ W++
Sbjct: 71 VGEFRAVTELGRPAAEYWNS 90
>M28200-1|AAA53195.1| 258|Homo sapiens MHC class II lymphocyte
antigen beta chain protein.
Length = 258
Score = 30.3 bits (65), Expect = 7.8
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +3
Query: 81 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSL 257
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++ S
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF--DSD 70
Query: 258 AGMHTSVSV--KPSAQSWSA 311
G +V+ +P+A+ W++
Sbjct: 71 VGEFRAVTELGRPAAEYWNS 90
>BT019780-1|AAV38583.1| 258|Homo sapiens major histocompatibility
complex, class II, DP beta 1 protein.
Length = 258
Score = 30.3 bits (65), Expect = 7.8
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +3
Query: 81 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSL 257
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++ S
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF--DSD 70
Query: 258 AGMHTSVSV--KPSAQSWSA 311
G +V+ +P+A+ W++
Sbjct: 71 VGEFRAVTELGRPAAEYWNS 90
>BC130304-1|AAI30305.1| 1125|Homo sapiens exportin 6 protein.
Length = 1125
Score = 30.3 bits (65), Expect = 7.8
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Frame = +2
Query: 230 VRKIFTSFTGRYAHKRFRKAQCPIVERLTNSLMMHGRN--NGKKLMAVRIVKHAFEIIHL 403
V+K+F T A + KAQ + L+N L++ N ++ VR + HA I L
Sbjct: 699 VQKVFNRITDASALRLVDKAQVLVCRALSNILLLPWPNLPENEQQWPVRSINHASLISAL 758
Query: 404 LTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQPLMFHPCAESTKQSGFCAQ 565
L+ A P +D+ I + ++ + ESTK C Q
Sbjct: 759 SRDYRNLKPSAVAPQRKMPLDDTKLIIHQTLSVLEDIVENISGESTKSRQICYQ 812
>BC108286-1|AAI08287.1| 941|Homo sapiens XPO6 protein protein.
Length = 941
Score = 30.3 bits (65), Expect = 7.8
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Frame = +2
Query: 230 VRKIFTSFTGRYAHKRFRKAQCPIVERLTNSLMMHGRN--NGKKLMAVRIVKHAFEIIHL 403
V+K+F T A + KAQ + L+N L++ N ++ VR + HA I L
Sbjct: 515 VQKVFNRITDASALRLVDKAQVLVCRALSNILLLPWPNLPENEQQWPVRSINHASLISAL 574
Query: 404 LTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQPLMFHPCAESTKQSGFCAQ 565
L+ A P +D+ I + ++ + ESTK C Q
Sbjct: 575 SRDYRNLKPSAVAPQRKMPLDDTKLIIHQTLSVLEDIVENISGESTKSRQICYQ 628
>BC078674-1|AAH78674.1| 956|Homo sapiens XPO6 protein protein.
Length = 956
Score = 30.3 bits (65), Expect = 7.8
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Frame = +2
Query: 230 VRKIFTSFTGRYAHKRFRKAQCPIVERLTNSLMMHGRN--NGKKLMAVRIVKHAFEIIHL 403
V+K+F T A + KAQ + L+N L++ N ++ VR + HA I L
Sbjct: 530 VQKVFNRITDASALRLVDKAQVLVCRALSNILLLPWPNLPENEQQWPVRSINHASLISAL 589
Query: 404 LTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQPLMFHPCAESTKQSGFCAQ 565
L+ A P +D+ I + ++ + ESTK C Q
Sbjct: 590 SRDYRNLKPSAVAPQRKMPLDDTKLIIHQTLSVLEDIVENISGESTKSRQICHQ 643
>BC014071-1|AAH14071.2| 888|Homo sapiens XPO6 protein protein.
Length = 888
Score = 30.3 bits (65), Expect = 7.8
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Frame = +2
Query: 230 VRKIFTSFTGRYAHKRFRKAQCPIVERLTNSLMMHGRN--NGKKLMAVRIVKHAFEIIHL 403
V+K+F T A + KAQ + L+N L++ N ++ VR + HA I L
Sbjct: 462 VQKVFNRITDASALRLVDKAQVLVCRALSNILLLPWPNLPENEQQWPVRSINHASLISAL 521
Query: 404 LTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQPLMFHPCAESTKQSGFCAQ 565
L+ A P +D+ I + ++ + ESTK C Q
Sbjct: 522 SRDYRNLKPSAVAPQRKMPLDDTKLIIHQTLSVLEDIVENISGESTKSRQICYQ 575
>BC013184-1|AAH13184.1| 258|Homo sapiens HLA-DPB1 protein protein.
Length = 258
Score = 30.3 bits (65), Expect = 7.8
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +3
Query: 81 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSL 257
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++ S
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF--DSD 70
Query: 258 AGMHTSVSV--KPSAQSWSA 311
G +V+ +P+A+ W++
Sbjct: 71 VGEFRAVTELGRPAAEYWNS 90
>BC004403-1|AAH04403.1| 888|Homo sapiens XPO6 protein protein.
Length = 888
Score = 30.3 bits (65), Expect = 7.8
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Frame = +2
Query: 230 VRKIFTSFTGRYAHKRFRKAQCPIVERLTNSLMMHGRN--NGKKLMAVRIVKHAFEIIHL 403
V+K+F T A + KAQ + L+N L++ N ++ VR + HA I L
Sbjct: 462 VQKVFNRITDASALRLVDKAQVLVCRALSNILLLPWPNLPENEQQWPVRSINHASLISAL 521
Query: 404 LTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQPLMFHPCAESTKQSGFCAQ 565
L+ A P +D+ I + ++ + ESTK C Q
Sbjct: 522 SRDYRNLKPSAVAPQRKMPLDDTKLIIHQTLSVLEDIVENISGESTKSRQICYQ 575
>AY804143-1|AAW78748.1| 258|Homo sapiens MHC class II antigen
protein.
Length = 258
Score = 30.3 bits (65), Expect = 7.8
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +3
Query: 81 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSL 257
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++ S
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF--DSD 70
Query: 258 AGMHTSVSV--KPSAQSWSA 311
G +V+ +P+A+ W++
Sbjct: 71 VGEFRAVTELGRPAAEYWNS 90
>AY804133-1|AAW78738.1| 258|Homo sapiens MHC class II antigen
protein.
Length = 258
Score = 30.3 bits (65), Expect = 7.8
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +3
Query: 81 VAEAGSVVVETMSLPQAADIPEIKLF-GRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSL 257
VA ++V S+ Q PE ++ GR CY + L+ YI +E+YA++ S
Sbjct: 13 VALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF--DSD 70
Query: 258 AGMHTSVSV--KPSAQSWSA 311
G +V+ +P+A+ W++
Sbjct: 71 VGEFRAVTELGRPAAEYWNS 90
>AY026388-1|AAK01471.1| 1125|Homo sapiens exportin 6 protein.
Length = 1125
Score = 30.3 bits (65), Expect = 7.8
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Frame = +2
Query: 230 VRKIFTSFTGRYAHKRFRKAQCPIVERLTNSLMMHGRN--NGKKLMAVRIVKHAFEIIHL 403
V+K+F T A + KAQ + L+N L++ N ++ VR + HA I L
Sbjct: 699 VQKVFNRITDASALRLVDKAQVLVCRALSNILLLPWPNLPENEQQWPVRSINHASLISAL 758
Query: 404 LTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQPLMFHPCAESTKQSGFCAQ 565
L+ A P +D+ I + ++ + ESTK C Q
Sbjct: 759 SRDYRNLKPSAVAPQRKMPLDDTKLIIHQTLSVLEDIVENISGESTKSRQICYQ 812
>AB002368-1|BAA20825.3| 1132|Homo sapiens KIAA0370 protein protein.
Length = 1132
Score = 30.3 bits (65), Expect = 7.8
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Frame = +2
Query: 230 VRKIFTSFTGRYAHKRFRKAQCPIVERLTNSLMMHGRN--NGKKLMAVRIVKHAFEIIHL 403
V+K+F T A + KAQ + L+N L++ N ++ VR + HA I L
Sbjct: 706 VQKVFNRITDASALRLVDKAQVLVCRALSNILLLPWPNLPENEQQWPVRSINHASLISAL 765
Query: 404 LTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQPLMFHPCAESTKQSGFCAQ 565
L+ A P +D+ I + ++ + ESTK C Q
Sbjct: 766 SRDYRNLKPSAVAPQRKMPLDDTKLIIHQTLSVLEDIVENISGESTKSRQICYQ 819
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,374,603
Number of Sequences: 237096
Number of extensions: 2256381
Number of successful extensions: 4509
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4501
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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