Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0926
         (753 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical pr...   167   1e-41
AF100306-10|AAC68926.1|  798|Caenorhabditis elegans Hypothetical...    29   4.7  
Z72503-6|CAA96594.4|  273|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical
           protein T05E11.1 protein.
          Length = 210

 Score =  167 bits (405), Expect = 1e-41
 Identities = 90/151 (59%), Positives = 100/151 (66%)
 Frame = +2

Query: 257 GRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLV 436
           GR+  +RFRKA CPIVERL NSLMMHGRNNGKKLM VRIVKHAFEII+LLTGENP+QVLV
Sbjct: 60  GRFQVRRFRKAACPIVERLANSLMMHGRNNGKKLMTVRIVKHAFEIIYLLTGENPVQVLV 119

Query: 437 TAIINSGPREDSTRIGRAGTVRRQPLMFHPCAESTKQSGFCAQVHVRLHSEILKQSQSVL 616
            A+INSGPREDSTRIGRAGTVRRQ +   P     +                +K     L
Sbjct: 120 NAVINSGPREDSTRIGRAGTVRRQAVDVAPLRRVNQAIWLLCTGAREAAFRNVKTIAECL 179

Query: 617 QMN*LMQLRVHLTPTPSKKKDELERVAKSNR 709
               +   +        KKKDELERVAKSNR
Sbjct: 180 ADELINAAKGSSNSYAIKKKDELERVAKSNR 210



 Score =  110 bits (265), Expect = 9e-25
 Identities = 51/55 (92%), Positives = 55/55 (100%)
 Frame = +1

Query: 511 VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKE 675
           VDV+PLRRVNQAIWLLCTGAREAAFRN+KTIAEC+ADELINAAKGSSNSYAIKK+
Sbjct: 145 VDVAPLRRVNQAIWLLCTGAREAAFRNVKTIAECLADELINAAKGSSNSYAIKKK 199



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 28/42 (66%), Positives = 32/42 (76%)
 Frame = +3

Query: 129 AADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHS 254
           A + PE+ LFG+WS   V VSD+SL DYI VKEK AKYLPHS
Sbjct: 17  ATEAPEVALFGKWSLQSVNVSDISLVDYIPVKEKSAKYLPHS 58


>AF100306-10|AAC68926.1|  798|Caenorhabditis elegans Hypothetical
           protein T24C4.7 protein.
          Length = 798

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
 Frame = +2

Query: 446 INSGPREDSTRIGRAGTVRRQPLMFHPCAESTKQSGFCAQV----HVRLHSEILKQSQSV 613
           I S  + D T +G       + L+F  C  + + S FC ++    H R HS   +  +S 
Sbjct: 562 IESSQKYDLTAMGDIARESSRCLLFRNCLCTNQMSRFCCKLVGREHCRFHSVYPENDESY 621

Query: 614 LQMN*LMQLRVHLTPTPSKKKDE 682
            +M+  +   +      SK+ ++
Sbjct: 622 AKMDAALSSFIAYNKDSSKEAEK 644


>Z72503-6|CAA96594.4|  273|Caenorhabditis elegans Hypothetical
           protein C26C6.8 protein.
          Length = 273

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 536 STKQSGFCAQVHVRLHSEILKQSQSVLQ 619
           S  QSGF    HV++  EIL+Q+  V++
Sbjct: 178 SDNQSGFVPSSHVKIPHEILQQASRVIK 205


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,475,185
Number of Sequences: 27780
Number of extensions: 373550
Number of successful extensions: 978
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)