Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0924
(622 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 140 6e-34
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 140 6e-34
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 137 7e-33
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 137 7e-33
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 106 1e-23
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 106 1e-23
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 106 1e-23
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 92 3e-19
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 92 3e-19
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 68 6e-12
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 68 6e-12
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 68 6e-12
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 65 4e-11
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 65 4e-11
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 62 4e-10
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 59 2e-09
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 59 2e-09
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 58 4e-09
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 58 4e-09
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 58 4e-09
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 58 4e-09
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 58 4e-09
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 58 4e-09
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 58 7e-09
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 58 7e-09
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 56 2e-08
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 55 4e-08
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 54 8e-08
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 54 8e-08
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 54 8e-08
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 53 1e-07
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 51 6e-07
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 51 6e-07
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 51 6e-07
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 50 1e-06
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 49 2e-06
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 49 2e-06
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 49 2e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 48 5e-06
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 48 7e-06
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 48 7e-06
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 48 7e-06
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 47 9e-06
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 47 1e-05
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 47 1e-05
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 47 1e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 46 2e-05
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 46 2e-05
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 46 2e-05
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 46 2e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 44 9e-05
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 44 9e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 44 9e-05
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 44 1e-04
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 43 2e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 42 5e-04
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 42 5e-04
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 41 6e-04
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 41 6e-04
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 41 6e-04
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 41 8e-04
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 40 0.002
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 40 0.002
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 40 0.002
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 38 0.004
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 38 0.006
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 37 0.013
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 37 0.013
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 37 0.013
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 37 0.013
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 37 0.013
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 36 0.031
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 36 0.031
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 35 0.054
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 35 0.054
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 35 0.054
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 35 0.054
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 35 0.054
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 34 0.071
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 33 0.12
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 33 0.12
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.22
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 33 0.22
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 33 0.22
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 32 0.29
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 30 1.2
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 30 1.2
L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 30 1.5
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 30 1.5
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 30 1.5
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 30 1.5
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 29 2.7
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 29 3.5
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 27 8.2
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 27 8.2
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 27 8.2
AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical ... 27 8.2
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 140 bits (340), Expect = 6e-34
Identities = 68/157 (43%), Positives = 94/157 (59%), Gaps = 1/157 (0%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
FVGG+S E +++L HF YGE+ VK D GRSRGFAF+ F E +AA E
Sbjct: 32 FVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAARE 91
Query: 183 HTINNKKVDPKKAKARHG-KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 359
TI K V+ K AK+R K+FVG L S+ S+ ++R+ F +FG + ++E PFDK R+
Sbjct: 92 QTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARR 151
Query: 360 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 470
F FI FE E+ + K+T G +E DVK+A P+
Sbjct: 152 NFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
Score = 60.1 bits (139), Expect = 1e-09
Identities = 24/75 (32%), Positives = 49/75 (65%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 416
KIFVG +S E++++++ + F+++G + + ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 417 PKRTIGGKEVDVKRA 461
++TI GK V+VK A
Sbjct: 90 REQTIKGKSVEVKPA 104
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 140 bits (340), Expect = 6e-34
Identities = 68/157 (43%), Positives = 94/157 (59%), Gaps = 1/157 (0%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
FVGG+S E +++L HF YGE+ VK D GRSRGFAF+ F E +AA E
Sbjct: 32 FVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAARE 91
Query: 183 HTINNKKVDPKKAKARHG-KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 359
TI K V+ K AK+R K+FVG L S+ S+ ++R+ F +FG + ++E PFDK R+
Sbjct: 92 QTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARR 151
Query: 360 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 470
F FI FE E+ + K+T G +E DVK+A P+
Sbjct: 152 NFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
Score = 60.1 bits (139), Expect = 1e-09
Identities = 24/75 (32%), Positives = 49/75 (65%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 416
KIFVG +S E++++++ + F+++G + + ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 417 PKRTIGGKEVDVKRA 461
++TI GK V+VK A
Sbjct: 90 REQTIKGKSVEVKPA 104
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 137 bits (331), Expect = 7e-33
Identities = 64/165 (38%), Positives = 101/165 (61%), Gaps = 9/165 (5%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+DKV+ E
Sbjct: 48 FIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNRE 107
Query: 183 HTINNKKVDPK---------KAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPF 335
H ++ KK+DPK K + K+F+G LS+ + ++++ +F +G + + + F
Sbjct: 108 HELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMF 167
Query: 336 DKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 470
DK + +GF F+TF+S++V + + + I GK V+ K+A PK
Sbjct: 168 DKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 58.0 bits (134), Expect = 5e-09
Identities = 30/97 (30%), Positives = 49/97 (50%)
Frame = +3
Query: 180 EHTINNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 359
E +N D GK+F+G LS + + + +R++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 360 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 470
GF FITF V+ +L + + GK++D K A PK
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 137 bits (331), Expect = 7e-33
Identities = 64/165 (38%), Positives = 101/165 (61%), Gaps = 9/165 (5%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+DKV+ E
Sbjct: 48 FIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNRE 107
Query: 183 HTINNKKVDPK---------KAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPF 335
H ++ KK+DPK K + K+F+G LS+ + ++++ +F +G + + + F
Sbjct: 108 HELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMF 167
Query: 336 DKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 470
DK + +GF F+TF+S++V + + + I GK V+ K+A PK
Sbjct: 168 DKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 58.0 bits (134), Expect = 5e-09
Identities = 30/97 (30%), Positives = 49/97 (50%)
Frame = +3
Query: 180 EHTINNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 359
E +N D GK+F+G LS + + + +R++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 360 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 470
GF FITF V+ +L + + GK++D K A PK
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 106 bits (254), Expect = 1e-23
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 11/167 (6%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
FVGGL+ TTD +R+ + +GEI I V DP T RSRGF F+ F +D M
Sbjct: 26 FVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRP 85
Query: 183 HTINNKKVDPKKAKARHGK-----------IFVGELSSEISDDEIRNFFSEFGTILEVEM 329
H I+ K VDPK+A R K ++V + + ++D + +F+++GT+ + E+
Sbjct: 86 HIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEI 145
Query: 330 PFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 470
DK + +GF F+TF+ V+ + + G DV++ K
Sbjct: 146 ILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 68.5 bits (160), Expect = 4e-12
Identities = 33/78 (42%), Positives = 48/78 (61%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 416
KIFVG L+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 417 PKRTIGGKEVDVKRATPK 470
I GK VD KRA P+
Sbjct: 84 RPHIIDGKTVDPKRAVPR 101
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 106 bits (254), Expect = 1e-23
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 11/167 (6%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
FVGGL+ TTD +R+ + +GEI I V DP T RSRGF F+ F +D M
Sbjct: 26 FVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRP 85
Query: 183 HTINNKKVDPKKAKARHGK-----------IFVGELSSEISDDEIRNFFSEFGTILEVEM 329
H I+ K VDPK+A R K ++V + + ++D + +F+++GT+ + E+
Sbjct: 86 HIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEI 145
Query: 330 PFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 470
DK + +GF F+TF+ V+ + + G DV++ K
Sbjct: 146 ILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 68.5 bits (160), Expect = 4e-12
Identities = 33/78 (42%), Positives = 48/78 (61%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 416
KIFVG L+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 417 PKRTIGGKEVDVKRATPK 470
I GK VD KRA P+
Sbjct: 84 RPHIIDGKTVDPKRAVPR 101
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 106 bits (254), Expect = 1e-23
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 11/167 (6%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
FVGGL+ TTD +R+ + +GEI I V DP T RSRGF F+ F +D M
Sbjct: 26 FVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRP 85
Query: 183 HTINNKKVDPKKAKARHGK-----------IFVGELSSEISDDEIRNFFSEFGTILEVEM 329
H I+ K VDPK+A R K ++V + + ++D + +F+++GT+ + E+
Sbjct: 86 HIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEI 145
Query: 330 PFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 470
DK + +GF F+TF+ V+ + + G DV++ K
Sbjct: 146 ILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
Score = 68.5 bits (160), Expect = 4e-12
Identities = 33/78 (42%), Positives = 48/78 (61%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 416
KIFVG L+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 417 PKRTIGGKEVDVKRATPK 470
I GK VD KRA P+
Sbjct: 84 RPHIIDGKTVDPKRAVPR 101
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 91.9 bits (218), Expect = 3e-19
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Frame = +3
Query: 42 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 221
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 222 KARHGK-----------IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 368
R K ++V + + ++D + +F+++GT+ + E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 369 FITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 470
F+TF+ V+ + + G DV++ K
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/76 (26%), Positives = 39/76 (51%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 79 YVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKS 138
Query: 183 HTINNKKVDPKKAKAR 230
H +N + D +K ++
Sbjct: 139 HMVNGHRCDVRKGLSK 154
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 91.9 bits (218), Expect = 3e-19
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Frame = +3
Query: 42 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 221
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 222 KARHGK-----------IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 368
R K ++V + + ++D + +F+++GT+ + E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 369 FITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 470
F+TF+ V+ + + G DV++ K
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/76 (26%), Positives = 39/76 (51%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 79 YVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKS 138
Query: 183 HTINNKKVDPKKAKAR 230
H +N + D +K ++
Sbjct: 139 HMVNGHRCDVRKGLSK 154
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 67.7 bits (158), Expect = 6e-12
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 21/172 (12%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
F+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 52 FIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRP 111
Query: 183 HTINNKKVDPKKAKARHG------------------KIFVGELSSEI-SDDEIRNFFSEF 305
H + K VD K+A R K+ + +++ + S D +R +F F
Sbjct: 112 HKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFETF 171
Query: 306 GTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVDVK 455
GT+ +VE+ Q +G F+ +E ++ + L + + + ++++V+
Sbjct: 172 GTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVR 218
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 416
K+F+G LS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 417 PKRTIGGKEVDVKRATPK 470
+GGK VD KRA P+
Sbjct: 110 RPHKLGGKTVDSKRAIPR 127
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 67.7 bits (158), Expect = 6e-12
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 21/172 (12%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
F+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 72 FIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRP 131
Query: 183 HTINNKKVDPKKAKARHG------------------KIFVGELSSEI-SDDEIRNFFSEF 305
H + K VD K+A R K+ + +++ + S D +R +F F
Sbjct: 132 HKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFETF 191
Query: 306 GTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVDVK 455
GT+ +VE+ Q +G F+ +E ++ + L + + + ++++V+
Sbjct: 192 GTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVR 238
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 416
K+F+G LS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 417 PKRTIGGKEVDVKRATPK 470
+GGK VD KRA P+
Sbjct: 130 RPHKLGGKTVDSKRAIPR 147
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 67.7 bits (158), Expect = 6e-12
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 21/172 (12%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
F+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 73 FIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRP 132
Query: 183 HTINNKKVDPKKAKARHG------------------KIFVGELSSEI-SDDEIRNFFSEF 305
H + K VD K+A R K+ + +++ + S D +R +F F
Sbjct: 133 HKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFETF 192
Query: 306 GTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVDVK 455
GT+ +VE+ Q +G F+ +E ++ + L + + + ++++V+
Sbjct: 193 GTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVR 239
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 416
K+F+G LS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 417 PKRTIGGKEVDVKRATPK 470
+GGK VD KRA P+
Sbjct: 131 RPHKLGGKTVDSKRAIPR 148
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 64.9 bits (151), Expect = 4e-11
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAG 179
+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 35 YVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMN 94
Query: 180 EHTINNKKV-------DPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFD 338
++ K + DP ++ G IF+ L I + I + FS FG IL ++ D
Sbjct: 95 FEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID 154
Query: 339 KTKNQRKGFCFITFESEQVV-NDLLKTPKRTIGGKEVDVKRATPK 470
+ KG+ F+ FE+E+ N + K + GK+V V + P+
Sbjct: 155 E-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPR 198
Score = 44.0 bits (99), Expect = 9e-05
Identities = 22/50 (44%), Positives = 28/50 (56%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 152
+V L D L+ F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 320 YVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 368
Score = 37.1 bits (82), Expect = 0.010
Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 26/139 (18%)
Frame = +3
Query: 54 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 194
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 195 ---------NKKVDPKKA----KARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPF 335
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 336 DKTKNQRKGFCFITFESEQ 392
D+ + KGF F+ FE +
Sbjct: 351 DE-NGRSKGFGFVCFEKPE 368
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 64.9 bits (151), Expect = 4e-11
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAG 179
+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 35 YVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMN 94
Query: 180 EHTINNKKV-------DPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFD 338
++ K + DP ++ G IF+ L I + I + FS FG IL ++ D
Sbjct: 95 FEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID 154
Query: 339 KTKNQRKGFCFITFESEQVV-NDLLKTPKRTIGGKEVDVKRATPK 470
+ KG+ F+ FE+E+ N + K + GK+V V + P+
Sbjct: 155 E-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPR 198
Score = 44.0 bits (99), Expect = 9e-05
Identities = 22/50 (44%), Positives = 28/50 (56%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 152
+V L D L+ F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 320 YVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 368
Score = 37.5 bits (83), Expect = 0.008
Identities = 42/166 (25%), Positives = 68/166 (40%), Gaps = 27/166 (16%)
Frame = +3
Query: 54 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 194
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 195 ---------NKKVDPKKA----KARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPF 335
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 336 DKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVKRATPK 470
D+ + KGF F+ FE E+ + + + + + K + V A K
Sbjct: 351 DE-NGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRK 395
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 61.7 bits (143), Expect = 4e-10
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Frame = +3
Query: 12 GLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 191
G+ ++TTD+ + +F G + +K + G S+GF F+ + +KV+A +H I
Sbjct: 179 GVDFKTTDECFQKYFEDIGTVVFCEIKRKSD-GNSKGFGFVRMSSVGEQNKVLAIPQHMI 237
Query: 192 NNKKVDPKKAKARH-------GKIFVGELSSEISDDEIRNFF-SEFGTILEVEMPFDK-T 344
+ ++ D K R +IFVG L+ ++ + ++R F E + +E + D
Sbjct: 238 DGRRCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFI 297
Query: 345 KNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 470
+GF F+T S + ++ T+ G V + A P+
Sbjct: 298 PKPFRGFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPR 339
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 59.3 bits (137), Expect = 2e-09
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAG 179
+VGGL + ++ L + G + S+N+ D T +GF F+ F E D +
Sbjct: 16 YVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILN 75
Query: 180 EHTINNKKVDPKKAKARH------GKIFVGELSSEISDDEIRNFFSEFGTILEV-EMPFD 338
+ K + KA A IFVG L E+ + + + FS FG IL+V ++ D
Sbjct: 76 MIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRD 135
Query: 339 KTKNQRKGFCFITFESEQVVNDLLK 413
KGF FI F S + + L+
Sbjct: 136 VDSGTSKGFAFINFASFEASDTALE 160
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 176
FVG L E +K L D F A+G I + + D ++G S+GFAFI F + E+ D + A
Sbjct: 103 FVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 419
I+VG L ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 420 KR-TIGGKEVDVKRAT 464
+ GK + V +A+
Sbjct: 75 NMIKLYGKPIKVNKAS 90
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 59.3 bits (137), Expect = 2e-09
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAG 179
+VGGL + ++ L + G + S+N+ D T +GF F+ F E D +
Sbjct: 26 YVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILN 85
Query: 180 EHTINNKKVDPKKAKARH------GKIFVGELSSEISDDEIRNFFSEFGTILEV-EMPFD 338
+ K + KA A IFVG L E+ + + + FS FG IL+V ++ D
Sbjct: 86 MIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRD 145
Query: 339 KTKNQRKGFCFITFESEQVVNDLLK 413
KGF FI F S + + L+
Sbjct: 146 VDSGTSKGFAFINFASFEASDTALE 170
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 176
FVG L E +K L D F A+G I + + D ++G S+GFAFI F + E+ D + A
Sbjct: 113 FVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 419
I+VG L ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 420 KR-TIGGKEVDVKRAT 464
+ GK + V +A+
Sbjct: 85 NMIKLYGKPIKVNKAS 100
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 58.4 bits (135), Expect = 4e-09
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID------ 161
FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 58 FVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALH 117
Query: 162 --KVMAAGEHTINNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPF 335
KV+ H + K D + R K+F+G+LS + +++ +R F++FG I + +
Sbjct: 118 NIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLR 175
Query: 336 DKTKNQRKGFCFITF 380
D+ R G F+TF
Sbjct: 176 DQDGKSR-GCAFVTF 189
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +3
Query: 192 NNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 371
N+ P + K+FVG++ + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 372 ITF 380
+TF
Sbjct: 101 VTF 103
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 58.4 bits (135), Expect = 4e-09
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID------ 161
FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 58 FVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALH 117
Query: 162 --KVMAAGEHTINNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPF 335
KV+ H + K D + R K+F+G+LS + +++ +R F++FG I + +
Sbjct: 118 NIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLR 175
Query: 336 DKTKNQRKGFCFITF 380
D+ R G F+TF
Sbjct: 176 DQDGKSR-GCAFVTF 189
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +3
Query: 192 NNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 371
N+ P + K+FVG++ + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 372 ITF 380
+TF
Sbjct: 101 VTF 103
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 58.4 bits (135), Expect = 4e-09
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID------ 161
FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 58 FVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALH 117
Query: 162 --KVMAAGEHTINNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPF 335
KV+ H + K D + R K+F+G+LS + +++ +R F++FG I + +
Sbjct: 118 NIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLR 175
Query: 336 DKTKNQRKGFCFITF 380
D+ R G F+TF
Sbjct: 176 DQDGKSR-GCAFVTF 189
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +3
Query: 192 NNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 371
N+ P + K+FVG++ + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 372 ITF 380
+TF
Sbjct: 101 VTF 103
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 58.4 bits (135), Expect = 4e-09
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID------ 161
FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 58 FVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALH 117
Query: 162 --KVMAAGEHTINNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPF 335
KV+ H + K D + R K+F+G+LS + +++ +R F++FG I + +
Sbjct: 118 NIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLR 175
Query: 336 DKTKNQRKGFCFITF 380
D+ R G F+TF
Sbjct: 176 DQDGKSR-GCAFVTF 189
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +3
Query: 192 NNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 371
N+ P + K+FVG++ + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 372 ITF 380
+TF
Sbjct: 101 VTF 103
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 58.4 bits (135), Expect = 4e-09
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID------ 161
FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 58 FVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALH 117
Query: 162 --KVMAAGEHTINNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPF 335
KV+ H + K D + R K+F+G+LS + +++ +R F++FG I + +
Sbjct: 118 NIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLR 175
Query: 336 DKTKNQRKGFCFITF 380
D+ R G F+TF
Sbjct: 176 DQDGKSR-GCAFVTF 189
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +3
Query: 192 NNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 371
N+ P + K+FVG++ + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 372 ITF 380
+TF
Sbjct: 101 VTF 103
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 58.4 bits (135), Expect = 4e-09
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID------ 161
FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 58 FVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALH 117
Query: 162 --KVMAAGEHTINNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPF 335
KV+ H + K D + R K+F+G+LS + +++ +R F++FG I + +
Sbjct: 118 NIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLR 175
Query: 336 DKTKNQRKGFCFITF 380
D+ R G F+TF
Sbjct: 176 DQDGKSR-GCAFVTF 189
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +3
Query: 192 NNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 371
N+ P + K+FVG++ + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 372 ITF 380
+TF
Sbjct: 101 VTF 103
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 57.6 bits (133), Expect = 7e-09
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 15/161 (9%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAG 179
++G L + ++ L + F G + SI V D + S G+A++ F+ P ++ +
Sbjct: 60 YIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMN 119
Query: 180 EHTINNKKV-------DPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFD 338
I+ + + DP +A +G IF+ L I + + + FS FG IL ++ D
Sbjct: 120 FEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD 179
Query: 339 KTKNQRKGFCFITFESE-------QVVNDLLKTPKRTIGGK 440
N KG+ F+ FE+E + VN +L + K+ GK
Sbjct: 180 DEGNS-KGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGK 219
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 152
+V + + D LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 346 YVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 46.4 bits (105), Expect = 2e-05
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 14/151 (9%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES----IDKV- 167
F+ L +K + D F +G I S V TD + G S+G+ F+ F+ S I+KV
Sbjct: 148 FIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 168 -MAAGEHTINNKKVDPKKAKAR--------HGKIFVGELSSEISDDEIRNFFSEFGTILE 320
M + + K P+ + + + +FV + +++ FS+FG I
Sbjct: 207 GMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITS 266
Query: 321 VEMPFDKTKNQRKGFCFITFESEQVVNDLLK 413
+ D + + KGF F+ F + ++
Sbjct: 267 AVVMTD-AQGKPKGFGFVAFADQDAAGQAVE 296
Score = 45.6 bits (103), Expect = 3e-05
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 27/183 (14%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-------KAPESI- 158
FV ++L F +GEI S V TD G+ +GF F+ F +A E +
Sbjct: 241 FVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKLN 299
Query: 159 DKVMAAGEHTINNKKVDPKKAKARHGK------------------IFVGELSSEISDDEI 284
D ++ + ++ + K ++ K ++V + +++DD +
Sbjct: 300 DSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDGL 359
Query: 285 RNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVKRA 461
R+ FS FGTI ++ D+ + KGF F+ FE E+ + + IG K + V A
Sbjct: 360 RDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVALA 418
Query: 462 TPK 470
K
Sbjct: 419 QRK 421
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 57.6 bits (133), Expect = 7e-09
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 15/161 (9%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAG 179
++G L + ++ L + F G + SI V D + S G+A++ F+ P ++ +
Sbjct: 60 YIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMN 119
Query: 180 EHTINNKKV-------DPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFD 338
I+ + + DP +A +G IF+ L I + + + FS FG IL ++ D
Sbjct: 120 FEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD 179
Query: 339 KTKNQRKGFCFITFESE-------QVVNDLLKTPKRTIGGK 440
N KG+ F+ FE+E + VN +L + K+ GK
Sbjct: 180 DEGNS-KGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGK 219
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 152
+V + + D LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 346 YVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 46.4 bits (105), Expect = 2e-05
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 14/151 (9%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES----IDKV- 167
F+ L +K + D F +G I S V TD + G S+G+ F+ F+ S I+KV
Sbjct: 148 FIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 168 -MAAGEHTINNKKVDPKKAKAR--------HGKIFVGELSSEISDDEIRNFFSEFGTILE 320
M + + K P+ + + + +FV + +++ FS+FG I
Sbjct: 207 GMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITS 266
Query: 321 VEMPFDKTKNQRKGFCFITFESEQVVNDLLK 413
+ D + + KGF F+ F + ++
Sbjct: 267 AVVMTD-AQGKPKGFGFVAFADQDAAGQAVE 296
Score = 45.6 bits (103), Expect = 3e-05
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 27/183 (14%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-------KAPESI- 158
FV ++L F +GEI S V TD G+ +GF F+ F +A E +
Sbjct: 241 FVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKLN 299
Query: 159 DKVMAAGEHTINNKKVDPKKAKARHGK------------------IFVGELSSEISDDEI 284
D ++ + ++ + K ++ K ++V + +++DD +
Sbjct: 300 DSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDGL 359
Query: 285 RNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVKRA 461
R+ FS FGTI ++ D+ + KGF F+ FE E+ + + IG K + V A
Sbjct: 360 RDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVALA 418
Query: 462 TPK 470
K
Sbjct: 419 QRK 421
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/69 (37%), Positives = 40/69 (57%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
FVGGL + T+DK L ++F +G+IE V TD NT +SRG+ F+ K S ++
Sbjct: 38 FVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPN 97
Query: 183 HTINNKKVD 209
I+ +K +
Sbjct: 98 PIIDGRKAN 106
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 416
KIFVG L SD + +F +FG I E + D+ + +G+ F+T + K
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 417 PKRTIGGKEVDVKRA 461
P I G++ +V A
Sbjct: 96 PNPIIDGRKANVNLA 110
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 55.2 bits (127), Expect = 4e-08
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +3
Query: 15 LSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTIN 194
+ W T +L +F YG I+S+N+ DP+TG RGFA I F + + +K + H I+
Sbjct: 32 VKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVID 91
Query: 195 NKKVD 209
+VD
Sbjct: 92 GDRVD 96
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/94 (24%), Positives = 42/94 (44%)
Frame = +3
Query: 186 TINNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 365
T N K+ + K +++ + ++ ++F +G+I V M +D +GF
Sbjct: 9 TTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGF 68
Query: 366 CFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 467
ITF+S+ N ++ I G VDV+ P
Sbjct: 69 ASITFDSKDGANKAIEQRPHVIDGDRVDVEPYIP 102
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 54.0 bits (124), Expect = 8e-08
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 25/153 (16%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------ESID 161
+VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P ES++
Sbjct: 105 YVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMN 164
Query: 162 KVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGELSSEISDDEIR 287
M G + N + P +K ++ +++V + ++S+ +++
Sbjct: 165 GQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETDLK 224
Query: 288 NFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 386
+ F FG I++ ++ T +GF ++ F +
Sbjct: 225 SVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 173
+V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 210 YVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 54.0 bits (124), Expect = 8e-08
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 25/153 (16%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------ESID 161
+VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P ES++
Sbjct: 105 YVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMN 164
Query: 162 KVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGELSSEISDDEIR 287
M G + N + P +K ++ +++V + ++S+ +++
Sbjct: 165 GQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETDLK 224
Query: 288 NFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 386
+ F FG I++ ++ T +GF ++ F +
Sbjct: 225 SVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 173
+V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 210 YVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 54.0 bits (124), Expect = 8e-08
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 25/153 (16%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------ESID 161
+VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P ES++
Sbjct: 105 YVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMN 164
Query: 162 KVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGELSSEISDDEIR 287
M G + N + P +K ++ +++V + ++S+ +++
Sbjct: 165 GQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETDLK 224
Query: 288 NFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 386
+ F FG I++ ++ T +GF ++ F +
Sbjct: 225 SVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 173
+V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 210 YVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 53.2 bits (122), Expect = 1e-07
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID------ 161
FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 58 FVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALH 117
Query: 162 --KVMAAGEHTINNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPF 335
KV+ H + K D + R K+F+G+LS + +++ +R F++FG I + +
Sbjct: 118 NIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLR 175
Query: 336 DKTKNQR 356
D+ R
Sbjct: 176 DQDGKSR 182
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +3
Query: 192 NNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 371
N+ P + K+FVG++ + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 372 ITF 380
+TF
Sbjct: 101 VTF 103
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 52.4 bits (120), Expect = 3e-07
Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 6/135 (4%)
Frame = +3
Query: 30 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESIDKVMAAGEHTINNKKV 206
T +E+R F + GEIES + D TG+S G+ F+ + + +++ V + + NK +
Sbjct: 54 TQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTI 113
Query: 207 D-----PKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 371
P + + ++V + ++ E+ + F FG I+ + D KG F
Sbjct: 114 KVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGF 173
Query: 372 ITFESEQVVNDLLKT 416
+ F+ + + +KT
Sbjct: 174 VRFDKKDEADVAIKT 188
Score = 41.1 bits (92), Expect = 6e-04
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 416
+FV LSS+ D + FS+FG I+ V++ D T+ Q KG+ F++ + + N +L
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSNYTEAYNAMLSL 434
Query: 417 PKRTIGGKEVDV--KRATP 467
+ GK + V K +TP
Sbjct: 435 NGTNLAGKTLQVVFKSSTP 453
Score = 31.9 bits (69), Expect = 0.38
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 161
+V G+ T EL F +G+I + + +D TG S+G F+ F + D
Sbjct: 131 YVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEAD 183
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 52.0 bits (119), Expect = 3e-07
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA--- 173
FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 25 FVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMN 84
Query: 174 ---AGEHTI------------------NNKKVDP--KKAKARHGKIFVGELSSEISDDEI 284
G TI N K D + + ++VG ++S +++DEI
Sbjct: 85 GQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEI 143
Query: 285 RNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 446
R F+ FG I EV + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 144 RQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 192
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 228 RHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 404
RH +FVG+LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 79
Query: 405 LLKTPKRTIGGKEVDVKRATPK 470
+ + + +G + + AT K
Sbjct: 80 IEQMNGQWLGRRTIRTNWATRK 101
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 52.0 bits (119), Expect = 3e-07
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA--- 173
FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 35 FVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMN 94
Query: 174 ---AGEHTI------------------NNKKVDP--KKAKARHGKIFVGELSSEISDDEI 284
G TI N K D + + ++VG ++S +++DEI
Sbjct: 95 GQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEI 153
Query: 285 RNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 446
R F+ FG I EV + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 154 RQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 202
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 228 RHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 404
RH +FVG+LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 89
Query: 405 LLKTPKRTIGGKEVDVKRATPK 470
+ + + +G + + AT K
Sbjct: 90 IEQMNGQWLGRRTIRTNWATRK 111
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 52.0 bits (119), Expect = 3e-07
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-- 176
FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 138 FVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMN 197
Query: 177 ----GEHTI------------------NNKKVDP--KKAKARHGKIFVGELSSEISDDEI 284
G TI N K D + + ++VG ++S +++DEI
Sbjct: 198 GQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEI 256
Query: 285 RNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 446
R F+ FG I EV + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 257 RQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 305
Score = 49.6 bits (113), Expect = 2e-06
Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-------KAPESID 161
+VG L T+ + F G + V D G + +AF+ F +A ++++
Sbjct: 49 YVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQASQALQTMN 105
Query: 162 KVMAAGEHTINNKKVDPKKAKA-----RHGKIFVGELSSEISDDEIRNFFSEFGTILEVE 326
K + N V+P + ++ RH +FVG+LSSE+ + ++R F FG + + +
Sbjct: 106 KRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAK 165
Query: 327 MPFDKTKNQRKGFCFITF-ESEQVVNDLLKTPKRTIGGKEVDVKRATPK 470
+ D + KG+ F+++ + E+ + + + +G + + AT K
Sbjct: 166 VIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 214
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 52.0 bits (119), Expect = 3e-07
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA--- 173
FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 106 FVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMN 165
Query: 174 ---AGEHTI------------------NNKKVDP--KKAKARHGKIFVGELSSEISDDEI 284
G TI N K D + + ++VG ++S +++DEI
Sbjct: 166 GQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEI 224
Query: 285 RNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 446
R F+ FG I EV + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 225 RQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 273
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 228 RHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 404
RH +FVG+LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 160
Query: 405 LLKTPKRTIGGKEVDVKRATPK 470
+ + + +G + + AT K
Sbjct: 161 IEQMNGQWLGRRTIRTNWATRK 182
Score = 31.9 bits (69), Expect = 0.38
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTK 347
++VG L S +++D I F++ G++ + ++ FD+ K
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 51.2 bits (117), Expect = 6e-07
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Frame = +3
Query: 129 FIVFKAPESIDKVMAAG-----EHTINNKKVDPKKAK-ARHGKIFVGELSSEISDDEIRN 290
++ F A ES++K + +H I KV KK + + IFVG L EI++D +
Sbjct: 205 YVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALIT 264
Query: 291 FFS-EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 401
FFS + G + V + DK + KGF F+ F+ + V+
Sbjct: 265 FFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS 302
Score = 48.0 bits (109), Expect = 5e-06
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAY-GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 179
FVG L +E T+ L F A G +E++ + D +TG+ +GFAF+ FK S+ +A
Sbjct: 249 FVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS--LALS 306
Query: 180 EHTINNKKVDPKKAK 224
TI +K D + K
Sbjct: 307 METIKMEKRDLRITK 321
Score = 31.5 bits (68), Expect = 0.50
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTILEVEM 329
+FVG + +++ +R FS+FGTI V M
Sbjct: 145 VFVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/100 (28%), Positives = 53/100 (53%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
++GGLS+ ++ ++ F YGE+ +IN+ D +TG+S+GFAF+ +K S ++A
Sbjct: 41 YIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRS--TILAV-- 96
Query: 183 HTINNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSE 302
N + + + H + + E +DDE + + E
Sbjct: 97 DNFNGISLHKRMIRVDHVEEYKVPKYKEDADDETKRLWEE 136
Score = 39.9 bits (89), Expect = 0.001
Identities = 14/51 (27%), Positives = 32/51 (62%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 392
I++G LS +S+ ++ FS++G ++ + + DK + KGF F+ ++ ++
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQR 90
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 51.2 bits (117), Expect = 6e-07
Identities = 19/68 (27%), Positives = 36/68 (52%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
+VG + W++T E+ +HF G++ + + D TG + FAF+ F+ ES+ +
Sbjct: 49 YVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLALVLSG 108
Query: 183 HTINNKKV 206
N+K+
Sbjct: 109 TMFRNRKI 116
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 50.0 bits (114), Expect = 1e-06
Identities = 40/171 (23%), Positives = 82/171 (47%), Gaps = 23/171 (13%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-- 176
FVG LS + +++ L+ F +GE+ V D T +S+G+ F+ F ++ + +A
Sbjct: 138 FVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMN 197
Query: 177 ----GEHTI--------NNKKVDPK--------KAKARHGKIFVGELSSEISDDEIRNFF 296
G+ + N+++ K KA + ++VG +S + +D ++R+ F
Sbjct: 198 GKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDLF 257
Query: 297 SEFGTILEVEMPFDKTKNQRKGFCFITFESEQ-VVNDLLKTPKRTIGGKEV 446
S +G I EV + K QR + F+ +E ++ +++ + + G +V
Sbjct: 258 STYGDIAEVRI----FKTQR--YAFVRYEKKECATKAIMEMNGKEMAGNQV 302
Score = 47.6 bits (108), Expect = 7e-06
Identities = 18/70 (25%), Positives = 45/70 (64%)
Frame = +3
Query: 183 HTINNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 362
H+ + ++ + ++H +FVG+LS ++S++ +++ F++FG + E ++ D + KG
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 363 FCFITFESEQ 392
+ F++F ++Q
Sbjct: 178 YGFVSFPNKQ 187
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 50.0 bits (114), Expect = 1e-06
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGR-SRGFAFIVFKAPESIDKVMAAG 179
FV L + TT+ E+R A + SI N+ RGFA++V + + + +
Sbjct: 596 FVSNLDFTTTEDEIRQ---AIEGVASIRFARKANSDLVHRGFAYVVMENDQKAQQALLKD 652
Query: 180 EHTINNKKV-----DPKK-------AKARHGKIFVGELSSEISDDEIRNFFSEFGTILEV 323
+ + + DP+K K+FV + + +DDE++ FS+FGT+ V
Sbjct: 653 RVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKALFSKFGTVTSV 712
Query: 324 EMPFDKTKNQRKGFCFITFESEQVVNDLLKT-PKRTIGGKEVDVKRATP 467
K + KG F+ F++E + + K + +E++V + P
Sbjct: 713 RRVTHK-DGKPKGIAFVDFDTEASAQKCVASGDKLMLRERELEVALSNP 760
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 49.2 bits (112), Expect = 2e-06
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 16/143 (11%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-------------- 140
FVG + +K+LR F +G+I + D TG +G AF+ +
Sbjct: 32 FVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLH 91
Query: 141 --KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTI 314
K +++ M +++ PK K K+F+G LS + S+DE+R F+ FG +
Sbjct: 92 DQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFGEL 150
Query: 315 LEVEMPFDKTKNQRKGFCFITFE 383
EV + KG F+ ++
Sbjct: 151 DEVTV-LRGADGASKGCAFVKYK 172
Score = 40.7 bits (91), Expect = 8e-04
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 380
K+FVG++ + + ++R+ F +FG I E + DK KG F+T+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 49.2 bits (112), Expect = 2e-06
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 16/143 (11%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-------------- 140
FVG + +K+LR F +G+I + D TG +G AF+ +
Sbjct: 32 FVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLH 91
Query: 141 --KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTI 314
K +++ M +++ PK K K+F+G LS + S+DE+R F+ FG +
Sbjct: 92 DQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFGEL 150
Query: 315 LEVEMPFDKTKNQRKGFCFITFE 383
EV + KG F+ ++
Sbjct: 151 DEVTV-LRGADGASKGCAFVKYK 172
Score = 40.7 bits (91), Expect = 8e-04
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 380
K+FVG++ + + ++R+ F +FG I E + DK KG F+T+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 49.2 bits (112), Expect = 2e-06
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 5/140 (3%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
+VG + + + L F G+I + + DP +G SRG+AF+ + E +
Sbjct: 203 YVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTYD 262
Query: 183 -HTINNKKVDPKKAKARHGKIFVGELSSEISDDEI----RNFFSEFGTILEVEMPFDKTK 347
H I+ K + ++F+G + S DEI + ++ +P D K
Sbjct: 263 GHEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEILEELKTHAEGVVDVIVYSVP-DNEK 321
Query: 348 NQRKGFCFITFESEQVVNDL 407
+ +GFCF+ F + +D+
Sbjct: 322 IKNRGFCFVDFIDHKTASDI 341
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 48.8 bits (111), Expect = 3e-06
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 170
+VG ++TT++EL + F + G+I ++ + D TGR RGFAFI F S + +
Sbjct: 8 YVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 389
++VG + +++E+ NFFS G I V + D+ + +GF FI F E
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEE 56
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
+VG + + T +E+ HF G + + ++ D +G +GFA++ F E + +A +
Sbjct: 81 YVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALAMTD 140
Query: 183 HTINNK--KVDPKK 218
+ + KVDPK+
Sbjct: 141 SLLRGRQIKVDPKR 154
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/80 (22%), Positives = 39/80 (48%)
Frame = +3
Query: 213 KKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 392
+KA+A ++VG + + +EI F G++ V + D+ KGF ++ F ++
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKE 130
Query: 393 VVNDLLKTPKRTIGGKEVDV 452
+ + L + G+++ V
Sbjct: 131 GMQNALAMTDSLLRGRQIKV 150
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 392
+FVG +S ++S+D IR+ FS+ G +L ++M D+ + KG+ FI F Q
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQ 70
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 140
FVG +S++ ++ +R F G + SI + D TG+ +G+ FI F
Sbjct: 21 FVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 47.6 bits (108), Expect = 7e-06
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
FVG + + ++E+R F +G++E +++KT NT +AF++F+ + + A E
Sbjct: 172 FVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAE 227
Query: 183 HTINNKKVDPKKAKARHGK------IFVGELSSEISDDEIRNFFSEFGTILEVE 326
+ + K +GK +FVG L S + ++ F EFG + ++
Sbjct: 228 EQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
Score = 34.7 bits (76), Expect = 0.054
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 413
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 414 TPKRTI--GGKEVDV 452
R I GG + +
Sbjct: 228 EQDRPIRAGGSRMKI 242
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 47.6 bits (108), Expect = 7e-06
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
FVG + + ++E+R F +G++E +++KT NT +AF++F+ + + A E
Sbjct: 172 FVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAE 227
Query: 183 HTINNKKVDPKKAKARHGK------IFVGELSSEISDDEIRNFFSEFGTILEVE 326
+ + K +GK +FVG L S + ++ F EFG + ++
Sbjct: 228 EQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
Score = 34.7 bits (76), Expect = 0.054
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 413
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 414 TPKRTI--GGKEVDV 452
R I GG + +
Sbjct: 228 EQDRPIRAGGSRMKI 242
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 47.6 bits (108), Expect = 7e-06
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
FVG + + ++E+R F +G++E +++KT NT +AF++F+ + + A E
Sbjct: 149 FVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAE 204
Query: 183 HTINNKKVDPKKAKARHGK------IFVGELSSEISDDEIRNFFSEFGTILEVE 326
+ + K +GK +FVG L S + ++ F EFG + ++
Sbjct: 205 EQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 258
Score = 34.7 bits (76), Expect = 0.054
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 413
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 204
Query: 414 TPKRTI--GGKEVDV 452
R I GG + +
Sbjct: 205 EQDRPIRAGGSRMKI 219
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 47.2 bits (107), Expect = 9e-06
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = +3
Query: 6 VGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 152
V LS TT+K+LRD FG +GEI ++ D +G SRGF FI F E
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIE 128
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 246 VGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 380
V LSS ++ ++R+ F EFG I + ++ +D+ +GF FI F
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/56 (35%), Positives = 34/56 (60%)
Frame = +3
Query: 213 KKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 380
K +RH +FVG+L SEI ++R F +FG + E ++ D N+ KG+ F+++
Sbjct: 125 KPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSY 180
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 170
FVG L E +LR+ F +GE+ + D NT + +G+ F+ + E ++ +
Sbjct: 135 FVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAI 190
Score = 34.7 bits (76), Expect = 0.054
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +3
Query: 183 HTINNKKVDP--KKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 356
H + K D +A A + ++VG +++ + +DEIR F FG I EV +
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEVR------TFKI 289
Query: 357 KGFCFITFES-EQVVNDLLKTPKRTIGGKEV 446
+G+ F+ FE+ E +++ IGG+ V
Sbjct: 290 QGYAFVKFETKESAARAIVQMNNADIGGQIV 320
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 46.8 bits (106), Expect = 1e-05
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 22/143 (15%)
Frame = +3
Query: 24 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 203
+T ++L + F A G + + + TD TGRS+G ++ F ES+ +A +
Sbjct: 35 DTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAP 94
Query: 204 VDPKKAKARHGK----------------------IFVGELSSEISDDEIRNFFSEFGTIL 317
+ ++ A + + V L +I + IR+ F FG I
Sbjct: 95 LQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIE 154
Query: 318 EVEMPFDKTKNQRKGFCFITFES 386
++++ D + R GF ITF +
Sbjct: 155 KIDLEVDSNRENR-GFATITFRN 176
Score = 33.9 bits (74), Expect = 0.094
Identities = 17/88 (19%), Positives = 40/88 (45%)
Frame = +3
Query: 195 NKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 374
N K++ + + + +++ + ++ FFS G + +V + D + KG C++
Sbjct: 12 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 71
Query: 375 TFESEQVVNDLLKTPKRTIGGKEVDVKR 458
F E+ V L + + G + ++R
Sbjct: 72 EFWDEESVPLGLALNGQRLMGAPLQIQR 99
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 46.8 bits (106), Expect = 1e-05
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 22/143 (15%)
Frame = +3
Query: 24 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 203
+T ++L + F A G + + + TD TGRS+G ++ F ES+ +A +
Sbjct: 180 DTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAP 239
Query: 204 VDPKKAKARHGK----------------------IFVGELSSEISDDEIRNFFSEFGTIL 317
+ ++ A + + V L +I + IR+ F FG I
Sbjct: 240 LQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIE 299
Query: 318 EVEMPFDKTKNQRKGFCFITFES 386
++++ D + R GF ITF +
Sbjct: 300 KIDLEVDSNRENR-GFATITFRN 321
Score = 33.9 bits (74), Expect = 0.094
Identities = 17/88 (19%), Positives = 40/88 (45%)
Frame = +3
Query: 195 NKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 374
N K++ + + + +++ + ++ FFS G + +V + D + KG C++
Sbjct: 157 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 216
Query: 375 TFESEQVVNDLLKTPKRTIGGKEVDVKR 458
F E+ V L + + G + ++R
Sbjct: 217 EFWDEESVPLGLALNGQRLMGAPLQIQR 244
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 46.4 bits (105), Expect = 2e-05
Identities = 17/46 (36%), Positives = 31/46 (67%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 140
+VG + ++ T++E+ ++F A G + ++ + D TGR RGFAF+ F
Sbjct: 9 YVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
Score = 38.7 bits (86), Expect = 0.003
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 389
++VG + + +++EI N+F+ G + V + +D+ + +GF F+ F E
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +3
Query: 207 DPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 386
DP ++ G IF+ L I + I + FS FG IL ++ D+ KG+ F+ FE+
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 106
Query: 387 EQVV-NDLLKTPKRTIGGKEVDVKRATPK 470
E+ N + K + GK+V V + P+
Sbjct: 107 EEAAQNAIQKVNGMLLAGKKVFVGKFQPR 135
Score = 44.0 bits (99), Expect = 9e-05
Identities = 22/50 (44%), Positives = 28/50 (56%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 152
+V L D L+ F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 257 YVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 305
Score = 37.5 bits (83), Expect = 0.008
Identities = 42/166 (25%), Positives = 68/166 (40%), Gaps = 27/166 (16%)
Frame = +3
Query: 54 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 194
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 227
Query: 195 ---------NKKVDPKKA----KARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPF 335
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 228 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 287
Query: 336 DKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVKRATPK 470
D+ + KGF F+ FE E+ + + + + + K + V A K
Sbjct: 288 DE-NGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRK 332
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 46.0 bits (104), Expect = 2e-05
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 34/171 (19%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GRS-----RGFAFIVFKAPESID 161
FVGG+S K + FG +G + VK PN+ G+S + F+V+ +S+
Sbjct: 208 FVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQSVI 267
Query: 162 KVMAAGEHTINNK------------KVDPK--------KAKARHGKI-------FVGELS 260
K+M+A N ++ P KARH +I F+G L
Sbjct: 268 KLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGGLP 327
Query: 261 SEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 413
++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 328 RIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 39.1 bits (87), Expect = 0.003
Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 8/133 (6%)
Frame = +3
Query: 51 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 230
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 231 HGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFES 386
K+FVG +S ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 387 EQVVNDLLKTPKR 425
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 46.0 bits (104), Expect = 2e-05
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 34/171 (19%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GRS-----RGFAFIVFKAPESID 161
FVGG+S K + FG +G + VK PN+ G+S + F+V+ +S+
Sbjct: 208 FVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQSVI 267
Query: 162 KVMAAGEHTINNK------------KVDPK--------KAKARHGKI-------FVGELS 260
K+M+A N ++ P KARH +I F+G L
Sbjct: 268 KLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGGLP 327
Query: 261 SEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 413
++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 328 RIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 39.1 bits (87), Expect = 0.003
Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 8/133 (6%)
Frame = +3
Query: 51 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 230
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 231 HGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFES 386
K+FVG +S ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 387 EQVVNDLLKTPKR 425
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 46.0 bits (104), Expect = 2e-05
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 34/171 (19%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GRS-----RGFAFIVFKAPESID 161
FVGG+S K + FG +G + VK PN+ G+S + F+V+ +S+
Sbjct: 208 FVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQSVI 267
Query: 162 KVMAAGEHTINNK------------KVDPK--------KAKARHGKI-------FVGELS 260
K+M+A N ++ P KARH +I F+G L
Sbjct: 268 KLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGGLP 327
Query: 261 SEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 413
++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 328 RIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 39.1 bits (87), Expect = 0.003
Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 8/133 (6%)
Frame = +3
Query: 51 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 230
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 231 HGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFES 386
K+FVG +S ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 387 EQVVNDLLKTPKR 425
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 140
+VG ++TT+ +L ++F G + ++ + D TGR RGFAF+ F
Sbjct: 7 YVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 389
++VG + ++D++ N+FS+ G + V + D+ + +GF F+ F E
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEE 55
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 44.0 bits (99), Expect = 9e-05
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +3
Query: 246 VGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 386
V L E+++DE+R+ F + G ++ + + DK KGF F+TFES
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 6 VGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 173
V L E + ELRD FG G + I + D TG +GFAF+ F++ + + +A
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIA 235
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 413
+IFVG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 125
Query: 414 TPKR 425
TPK+
Sbjct: 126 TPKQ 129
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/95 (25%), Positives = 50/95 (52%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
FVGG TT+ ELR+HF + ++ + + + G+S+G+ FI F+ + +++
Sbjct: 69 FVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI----- 122
Query: 183 HTINNKKVDPKKAKARHGKIFVGELSSEISDDEIR 287
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 123 -----RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 152
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 44.0 bits (99), Expect = 9e-05
Identities = 22/50 (44%), Positives = 28/50 (56%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 152
+V L D L+ F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 260 YVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 308
Score = 37.5 bits (83), Expect = 0.008
Identities = 42/166 (25%), Positives = 68/166 (40%), Gaps = 27/166 (16%)
Frame = +3
Query: 54 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 194
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 230
Query: 195 ---------NKKVDPKKA----KARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPF 335
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 231 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 290
Query: 336 DKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVKRATPK 470
D+ + KGF F+ FE E+ + + + + + K + V A K
Sbjct: 291 DE-NGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRK 335
Score = 34.7 bits (76), Expect = 0.054
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 170
+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 35 YVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 413
+IFVG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 126
Query: 414 TPKR 425
TPK+
Sbjct: 127 TPKQ 130
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/95 (25%), Positives = 50/95 (52%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
FVGG TT+ ELR+HF + ++ + + + G+S+G+ FI F+ + +++
Sbjct: 70 FVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI----- 123
Query: 183 HTINNKKVDPKKAKARHGKIFVGELSSEISDDEIR 287
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 124 -----RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 153
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +3
Query: 231 HGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 410
H +F+G L ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 163
Query: 411 K 413
+
Sbjct: 164 E 164
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/46 (41%), Positives = 32/46 (69%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 140
FVG +++ET++ +LR F AYG+I+ + + D G+ RG+AFI +
Sbjct: 107 FVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFIEY 151
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 419
+FV + E ++D++ + FSE+G I + + D+ KG+ + +E+++ N+ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 420 KRT-IGGKEVDV 452
T + G+ V V
Sbjct: 117 NDTDLLGQNVKV 128
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
FV + E T+ ++ D F YG+I++I++ D TG +G+A + ++ + ++ +
Sbjct: 58 FVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQSN 117
Query: 183 HTI---NNKKVD 209
T N KVD
Sbjct: 118 DTDLLGQNVKVD 129
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/79 (21%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLK 413
++F G+L +E+SD+ + F ++ + + ++ + N+ KG+ F++F +SE V + +
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 414 TPKRTIGGKEVDVKRATPK 470
+ +G + + ++++ K
Sbjct: 264 MDGKYVGNRPIKLRKSAWK 282
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 41.1 bits (92), Expect = 6e-04
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 173
+VGG + + T+K L F +G++ +I++ D +G+ RGF F+ F E D MA
Sbjct: 14 YVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAE--DAAMA 68
Score = 37.1 bits (82), Expect = 0.010
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 228 RHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE-SEQVVND 404
R ++VG + ++++ + F FG ++ + +P D + +GF F+ F+ +E
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMA 68
Query: 405 LLKTPKRTIGGKEVDVKRATP 467
+ + + GK + V A P
Sbjct: 69 IDNMNESELFGKTIRVNFARP 89
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +3
Query: 12 GLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 191
GL WE T++ELRD FG G IES+ + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 192 NNKKVD 209
++ ++
Sbjct: 68 GSRYIE 73
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +3
Query: 12 GLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 191
GL WE T++ELRD FG G IES+ + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 192 NNKKVD 209
++ ++
Sbjct: 68 GSRYIE 73
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 40.7 bits (91), Expect = 8e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 155
F+ L + T + +L+ F YGE+ + V D TG +GFA + F PE+
Sbjct: 282 FLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEA 332
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +3
Query: 30 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 203
T+++LR F YG+I ++K G+ RGFAF+ F S +A T N K
Sbjct: 15 TEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAKSNQTFFNSK 71
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 170
F+G + + +T +E+ +HF G+I + D T + + FA+I F SI+ +
Sbjct: 58 FIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 113
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +3
Query: 6 VGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 140
+ LS++TT +LR F YG+I +++ D + +S+GF F+ F
Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +3
Query: 6 VGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 140
+ LS++TT +LR F YG+I +++ D + +S+GF F+ F
Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 392
+++ L +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 159
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 392
+++ L +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 133
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 170
F+G + + +T +E+ +HF G I + D T + + FA+I F SI+ +
Sbjct: 64 FIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 119
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 392
++VG LS +D++ F G + V M D+ K GFCF+ + + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE 89
Score = 30.7 bits (66), Expect = 0.88
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
+VG LS+ T + ++ + FG G++ + + D GF F+ + E + +
Sbjct: 40 YVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELAL---- 95
Query: 183 HTINNKKVDPKKAKA 227
I+N ++D + +A
Sbjct: 96 QNISNTRMDDRVIRA 110
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 36.7 bits (81), Expect = 0.013
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 416
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 417 PK-RTIGGKEVDVKRATPK 470
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 36.7 bits (81), Expect = 0.013
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 416
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 417 PK-RTIGGKEVDVKRATPK 470
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 36.7 bits (81), Expect = 0.013
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 416
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 417 PK-RTIGGKEVDVKRATPK 470
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 36.7 bits (81), Expect = 0.013
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-G 179
+V + + +++L F AYG + S+ + T N S+GF F+ + ES +K AA
Sbjct: 54 YVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAALH 111
Query: 180 EHTINNKKVDPKKAKARHGKI 242
E + + ++ ++A K+
Sbjct: 112 ESHVQGRIIEVRRATPTRRKL 132
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 36.7 bits (81), Expect = 0.013
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK-APESIDKVMAAG 179
+VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ ++ D V A
Sbjct: 12 YVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDAEDAVRARD 67
Query: 180 EHTINNKKV 206
+ + +++
Sbjct: 68 GYEFDGRRI 76
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 36.7 bits (81), Expect = 0.013
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK-APESIDKVMAAG 179
+VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ ++ D V A
Sbjct: 12 YVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDAEDAVRARD 67
Query: 180 EHTINNKKV 206
+ + +++
Sbjct: 68 GYEFDGRRI 76
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 36.7 bits (81), Expect = 0.013
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-G 179
+V + + +++L F AYG + S+ + T N S+GF F+ + ES +K AA
Sbjct: 54 YVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAALH 111
Query: 180 EHTINNKKVDPKKAKARHGKI 242
E + + ++ ++A K+
Sbjct: 112 ESHVQGRIIEVRRATPTRRKL 132
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 35.5 bits (78), Expect = 0.031
Identities = 32/136 (23%), Positives = 57/136 (41%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
FVG L E + EL++ F +G+I + +GFAF+ + A +
Sbjct: 119 FVGNLPNEVKETELKELFSPHGDIAECYLS-------GKGFAFLRLDTRAHAESAKEAID 171
Query: 183 HTINNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 362
I + + + I V ELS +S++ + + FS FG + D+ K + G
Sbjct: 172 GRIIHGRQVRVRFAVHGAAIRVKELSPTVSNEMLYHAFSHFGDVERAVHIVDE-KGRPTG 230
Query: 363 FCFITFESEQVVNDLL 410
+ FE + N+ +
Sbjct: 231 EGIVEFERKPNCNEAM 246
Score = 35.1 bits (77), Expect = 0.041
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 210 PKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 389
PKK ++FVG L +E+ + E++ FS G I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 390 QVVNDLLKT-PKRTIGGKEVDVKRA 461
+ R I G++V V+ A
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 35.5 bits (78), Expect = 0.031
Identities = 32/136 (23%), Positives = 57/136 (41%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
FVG L E + EL++ F +G+I + +GFAF+ + A +
Sbjct: 119 FVGNLPNEVKETELKELFSPHGDIAECYLS-------GKGFAFLRLDTRAHAESAKEAID 171
Query: 183 HTINNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 362
I + + + I V ELS +S++ + + FS FG + D+ K + G
Sbjct: 172 GRIIHGRQVRVRFAVHGAAIRVKELSPTVSNEMLYHAFSHFGDVERAVHIVDE-KGRPTG 230
Query: 363 FCFITFESEQVVNDLL 410
+ FE + N+ +
Sbjct: 231 EGIVEFERKPNCNEAM 246
Score = 35.1 bits (77), Expect = 0.041
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 210 PKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 389
PKK ++FVG L +E+ + E++ FS G I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 390 QVVNDLLKT-PKRTIGGKEVDVKRA 461
+ R I G++V V+ A
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 34.7 bits (76), Expect = 0.054
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +3
Query: 24 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 203
+ T+K+L D F YG+I + V T+ +G AFI F E+ ++ A E + N
Sbjct: 249 QVTEKDLNDFFYQYGDIRCLRVLTE------KGCAFIEFTTREAAER---AAERSFNKTF 299
Query: 204 VDPKKAKARHGK 239
+ K+ R G+
Sbjct: 300 IKGKRLTIRWGE 311
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 34.7 bits (76), Expect = 0.054
Identities = 15/57 (26%), Positives = 34/57 (59%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 173
F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 294 FIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 349
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 380
KIF+G L + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 34.7 bits (76), Expect = 0.054
Identities = 15/57 (26%), Positives = 34/57 (59%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 173
F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 294 FIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 349
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 380
KIF+G L + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 34.7 bits (76), Expect = 0.054
Identities = 15/57 (26%), Positives = 34/57 (59%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 173
F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 269 FIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 324
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 380
KIF+G L + +++D+++ FG + + D N KG+ F +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 313
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 34.7 bits (76), Expect = 0.054
Identities = 15/57 (26%), Positives = 34/57 (59%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 173
F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 272 FIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 327
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 380
KIF+G L + +++D+++ FG + + D N KG+ F +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 316
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 34.3 bits (75), Expect = 0.071
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 182
++ L ++ T +E+ + FG +G + I V NT +RG AF+V+ E I A E
Sbjct: 22 YIKNLPYKITTEEMYEIFGKFGAVRQIRVG---NTAETRGTAFVVY---EDIFDAKTACE 75
Query: 183 H 185
H
Sbjct: 76 H 76
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 164
FV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 244 FVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 386
+FV +L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 164
FV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 244 FVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 386
+FV +L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 164
FV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 175 FVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 228
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 386
+FV +L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 222
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 33.5 bits (73), Expect = 0.12
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = +3
Query: 3 FVGGLSWETTDKEL-RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 179
F+GG+ T ++L R G YG++ + + DP +G A + F ++ + ++
Sbjct: 368 FIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRAISGR 427
Query: 180 ----EHTINNKKVDPK 215
H NNK+V+ K
Sbjct: 428 FVQVNHAENNKRVEIK 443
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPF-DKTKNQRKGFCFITFESEQVVNDLL 410
+++VG S+ +S ++IRN ++ EV + + + +GF F+ S N LL
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLL 68
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/49 (26%), Positives = 29/49 (59%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 149
F+ LS++T ++ +++ +G+I+ + ++G S+G AF+ F P
Sbjct: 266 FLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTP 314
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.22
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +3
Query: 177 GEHTINNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQ 353
G+HT + + K +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 354 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 455
GFC T + E + L + +G K++ VK
Sbjct: 88 GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.22
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +3
Query: 177 GEHTINNKKVDPKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQ 353
G+HT + + K +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 354 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 455
GFC T + E + L + +G K++ VK
Sbjct: 88 GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMP 332
K+FVG L S + + +I NFFS +G L+V+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 210 PKKAKARHGKIFVGELSSEISDDEIRNFFSEFGTILE 320
PKK ++FVG L +E+ + E++ FS G I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 32.3 bits (70), Expect = 0.29
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYG 68
FVGG+ W+ T+ L+D FG +G
Sbjct: 298 FVGGVPWDITEAALKDSFGEFG 319
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 31.9 bits (69), Expect = 0.38
Identities = 17/70 (24%), Positives = 37/70 (52%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 416
++++G L + SD ++ +FF +G + +V M + GF F+ F+ ++ +D +
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAV-- 52
Query: 417 PKRTIGGKEV 446
+ GKE+
Sbjct: 53 --HDLNGKEL 60
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 30.3 bits (65), Expect = 1.2
Identities = 9/41 (21%), Positives = 24/41 (58%)
Frame = +3
Query: 273 DDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQV 395
+ E+ +F +FG +L + + ++ KG+ ++ F+++ V
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAV 85
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTILEVEMPFDK 341
++VG L S +++D I F++ G++ + ++ FD+
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical
protein R05D3.8 protein.
Length = 187
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 30 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 170
T KEL+ +FGAYG+I + +D + G F I F S+D ++
Sbjct: 44 TSKELKMNFGAYGKITDVEFVSD-SEGPLH-FCIITFADSRSVDVLL 88
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 318 EVEMPFDKTKNQRKGFCFITFESEQVVNDLLK-TPKRTIGGKEVDVKRA 461
++ + D+ KGF ++TFE+EQ +N + G + + V RA
Sbjct: 40 DIHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRA 88
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 413
K++VG L S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 413
K++VG L S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +3
Query: 237 KIFVGELSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 413
K++VG L S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 424 LLGVLSKSFTTCSDSNVMKQKPFLWFFVLSKGISTSKI 311
L+G L S+ ++ PF +FF+ S+G STSKI
Sbjct: 156 LIGALWNYVFVLSNVSLFVLLPFSYFFIESQGFSTSKI 193
>Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical
protein D1046.1 protein.
Length = 489
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +3
Query: 3 FVGGLSWETTDKELRDHFGAYGEIES--INVKTDPN--TGRSRGFAFIVFKAPESIDKVM 170
+VG L W TTD +L + G S ++K N G+S+G+A +V + ++ + M
Sbjct: 87 YVGNLLWYTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALLVLNSDAAVKQTM 146
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 6 VGGLSWETTDKELRDHFGAYGEIESIN--VKTDPNTGRSRGFAFIVFKAPESI 158
+G + WE K+++D F +YG I+ DP R+R + + P I
Sbjct: 69 LGKMMWEAGSKQVQDTFQSYGRIDLFRPYFDVDPAEVRTRLIRSFIPRKPSQI 121
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 114 SRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGELS 260
SRGF IVF A ++++V G H +N+ K K K H + E +
Sbjct: 487 SRGFVEIVFCAITAMEQVKGYGTHLMNHCKDYMIKNKIYHMLTYADEFA 535
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/61 (26%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Frame = +3
Query: 240 IFVGELSSEISDDEIRNFFSEFGTI-LEVEMPFDKTKNQRKGFCFITF----ESEQVVND 404
+++G++ ++ +++ + F+E G +V+ + K++ KG+CFI F E+ Q + D
Sbjct: 70 LWIGDVPTDWTEETLSQVFTECGHAPYKVKRVY--VKDELKGYCFIEFITFDEARQTLYD 127
Query: 405 L 407
L
Sbjct: 128 L 128
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +3
Query: 33 DKELRDHFGAYGEIESI----NVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 176
+ E++ F YGEIE + V PN FAFI + + + A
Sbjct: 346 ESEIKQVFYKYGEIEEVRMPRKVLDSPNDTSKHAFAFITMRNKAGVKAIFEA 397
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 6 VGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-GE 182
V + ++ + +L F G + ++V+ N S+GF F+ + P+ D+ A
Sbjct: 104 VSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNG 161
Query: 183 HTINNKKVDPKKAKAR-HGK 239
TI ++V+ A R H K
Sbjct: 162 TTIEGRRVEVNLATQRVHNK 181
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 6 VGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-GE 182
V + ++ + +L F G + ++V+ N S+GF F+ + P+ D+ A
Sbjct: 104 VSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNG 161
Query: 183 HTINNKKVDPKKAKAR-HGK 239
TI ++V+ A R H K
Sbjct: 162 TTIEGRRVEVNLATQRVHNK 181
>AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical
protein K03E5.3 protein.
Length = 368
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 91 RQIQTQADHEGLPSLCLR 144
+ I+T D EG+PS CLR
Sbjct: 74 KMIRTDRDEEGIPSTCLR 91
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,145,360
Number of Sequences: 27780
Number of extensions: 234603
Number of successful extensions: 967
Number of sequences better than 10.0: 122
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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