Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0923
(731 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 89 2e-18
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 66 2e-11
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 66 2e-11
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 59 4e-09
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 59 4e-09
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 59 4e-09
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 55 6e-08
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 55 6e-08
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 55 6e-08
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 48 9e-06
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 37 0.013
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 37 0.013
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 37 0.017
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 37 0.017
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 37 0.017
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 37 0.017
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 36 0.022
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 35 0.027
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 35 0.027
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 36 0.039
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 36 0.039
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 36 0.039
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 34 0.12
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 34 0.12
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 33 0.21
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 32 0.48
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 32 0.48
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 31 0.64
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 31 0.84
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 31 0.84
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 31 1.1
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 30 1.9
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 30 1.9
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 2.6
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 29 2.6
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 29 2.6
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 29 2.6
AF039046-14|AAB94214.1| 388|Caenorhabditis elegans Prion-like-(... 29 2.6
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 29 3.4
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z30423-11|CAD27184.1| 237|Caenorhabditis elegans Hypothetical p... 28 7.8
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 28 7.8
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 28 7.8
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 28 7.8
AC024859-26|AAK29977.2| 300|Caenorhabditis elegans Hypothetical... 28 7.8
AC006777-5|AAK72311.1| 247|Caenorhabditis elegans Hypothetical ... 28 7.8
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 28 7.8
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 28 7.8
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 89.4 bits (212), Expect = 2e-18
Identities = 44/119 (36%), Positives = 58/119 (48%)
Frame = +1
Query: 136 SVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEADRCYRCNG 315
S CY C TGHF+R+C +GG G GH++RDC G
Sbjct: 35 STCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSE-GGSGG 93
Query: 316 TGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCXKSGHISRNCPDGT 492
G E +S CYNC ++GHI+R C E G + + CY C ++GHISR+CP T
Sbjct: 94 YGGRGGE-GRSFGGQKCYNCGRSGHISRECTESG-SAEEKRCYQCQETGHISRDCPSQT 150
Score = 68.1 bits (159), Expect = 6e-12
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 17/82 (20%)
Frame = +1
Query: 289 ADR-CYRCNGTGHIARECAQSPDE---------PSCYNCNKTGHIARNCPEGGRESATQ- 435
+DR CY+C GHI+R C + +CYNC +TGH +R+CP+GG +
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRG 61
Query: 436 ------TCYNCXKSGHISRNCP 483
+CYNC GH SR+CP
Sbjct: 62 GGGGGGSCYNCGGRGHYSRDCP 83
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEAD 294
CY C R+GH +RECT+ G + + ++ Q Q TGH +RDC + +
Sbjct: 109 CYNCGRSGHISRECTESG--------SAEEKRCYQCQETGHISRDCPSQTN 151
Score = 36.7 bits (81), Expect = 0.017
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 433 QTCYNCXKSGHISRNCPDG 489
+ CY C + GHISRNCP+G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/124 (32%), Positives = 52/124 (41%), Gaps = 6/124 (4%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKE---EADRCYRCN 312
C+ C GH ++EC + V R + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 313 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRESATQTCYNCXKSGHISRNCP 483
GH A +C Q P P C NC + GH A++C E R T+ C C + GH CP
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Query: 484 DGTK 495
K
Sbjct: 682 TRPK 685
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 274 DCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYN 447
D E C+ C GHI++EC P P C NC + GH A +C + C N
Sbjct: 564 DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PRVPRGPCRN 620
Query: 448 CXKSGHISRNC 480
C GH + +C
Sbjct: 621 CGIEGHFAVDC 631
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEADR------CY 303
C C GHFA +C Q V R N +E GHFA+DC+ E R C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV-PRGPCRNCGQE--------GHFAKDCQNERVRMEPTEPCR 668
Query: 304 RCNGTGHIARECAQSPDE 357
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/124 (32%), Positives = 52/124 (41%), Gaps = 6/124 (4%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKE---EADRCYRCN 312
C+ C GH ++EC + V R + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 313 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRESATQTCYNCXKSGHISRNCP 483
GH A +C Q P P C NC + GH A++C E R T+ C C + GH CP
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Query: 484 DGTK 495
K
Sbjct: 682 TRPK 685
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 274 DCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYN 447
D E C+ C GHI++EC P P C NC + GH A +C + C N
Sbjct: 564 DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PRVPRGPCRN 620
Query: 448 CXKSGHISRNC 480
C GH + +C
Sbjct: 621 CGIEGHFAVDC 631
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEADR------CY 303
C C GHFA +C Q V R N +E GHFA+DC+ E R C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV-PRGPCRNCGQE--------GHFAKDCQNERVRMEPTEPCR 668
Query: 304 RCNGTGHIARECAQSPDE 357
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 58.8 bits (136), Expect = 4e-09
Identities = 37/134 (27%), Positives = 54/134 (40%), Gaps = 15/134 (11%)
Frame = +1
Query: 139 VCYKCNRTGHFARECTQ--------GGVVSRDSGFNRQR-------EKLLQVQPTGHFAR 273
VCY C + GH +R+C + G SGF L +G+
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 274 DCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCX 453
NG G + +C+NC + GH + +CPE +E + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 454 KSGHISRNCPDGTK 495
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 58.0 bits (134), Expect = 6e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +1
Query: 361 SCYNCNKTGHIARNCPEGGRESATQTCYNCXKSGHISRNCPDGTK 495
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = +1
Query: 139 VCYKCNRTGHFARECTQ-----GGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEADRCY 303
VCY C + GH +R+C + G SGF + F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 304 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 408
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 47.2 bits (107), Expect = 1e-05
Identities = 36/133 (27%), Positives = 50/133 (37%), Gaps = 15/133 (11%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEADRCYRCNGT- 318
C+ C + GH + +C + R+ Q GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 319 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCXK 456
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 457 SGHISRNCPDGTK 495
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 256 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 411
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 46.0 bits (104), Expect = 3e-05
Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 15/100 (15%)
Frame = +1
Query: 250 QPTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHI 393
Q GH + DC KE R CY C GH +R+C + P E S + G
Sbjct: 377 QQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGF 436
Query: 394 ARNCPEG---GRESATQTCYNCXKSGHISRNCPDGTKTCY 504
EG E C+NC GH S CP+ + C+
Sbjct: 437 GGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCF 476
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 418 RESATQTCYNCXKSGHISRNCPDGTK 495
R C+NC + GH S +CP+ K
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKK 277
Score = 29.9 bits (64), Expect = 1.9
Identities = 32/140 (22%), Positives = 47/140 (33%), Gaps = 22/140 (15%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEADRCYRCN--- 312
C+ C + GH + +C + R+ Q GH +RDC EE N
Sbjct: 259 CFNCQQPGHRSNDCP-------EPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 313 ------------GTGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATQ 435
GTG + + S + G + GG R
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 436 TCYNCXKSGHISRNCPDGTK 495
C+NC + GH S +CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKK 391
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 58.8 bits (136), Expect = 4e-09
Identities = 37/134 (27%), Positives = 54/134 (40%), Gaps = 15/134 (11%)
Frame = +1
Query: 139 VCYKCNRTGHFARECTQ--------GGVVSRDSGFNRQR-------EKLLQVQPTGHFAR 273
VCY C + GH +R+C + G SGF L +G+
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 274 DCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCX 453
NG G + +C+NC + GH + +CPE +E + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 454 KSGHISRNCPDGTK 495
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 58.0 bits (134), Expect = 6e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +1
Query: 361 SCYNCNKTGHIARNCPEGGRESATQTCYNCXKSGHISRNCPDGTK 495
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = +1
Query: 139 VCYKCNRTGHFARECTQ-----GGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEADRCY 303
VCY C + GH +R+C + G SGF + F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 304 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 408
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 47.2 bits (107), Expect = 1e-05
Identities = 36/133 (27%), Positives = 50/133 (37%), Gaps = 15/133 (11%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEADRCYRCNGT- 318
C+ C + GH + +C + R+ Q GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 319 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCXK 456
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 457 SGHISRNCPDGTK 495
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 256 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 411
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 46.0 bits (104), Expect = 3e-05
Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 15/100 (15%)
Frame = +1
Query: 250 QPTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHI 393
Q GH + DC KE R CY C GH +R+C + P E S + G
Sbjct: 377 QQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGF 436
Query: 394 ARNCPEG---GRESATQTCYNCXKSGHISRNCPDGTKTCY 504
EG E C+NC GH S CP+ + C+
Sbjct: 437 GGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCF 476
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 418 RESATQTCYNCXKSGHISRNCPDGTK 495
R C+NC + GH S +CP+ K
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKK 277
Score = 29.9 bits (64), Expect = 1.9
Identities = 32/140 (22%), Positives = 47/140 (33%), Gaps = 22/140 (15%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEADRCYRCN--- 312
C+ C + GH + +C + R+ Q GH +RDC EE N
Sbjct: 259 CFNCQQPGHRSNDCP-------EPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 313 ------------GTGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATQ 435
GTG + + S + G + GG R
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 436 TCYNCXKSGHISRNCPDGTK 495
C+NC + GH S +CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKK 391
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 58.8 bits (136), Expect = 4e-09
Identities = 37/134 (27%), Positives = 54/134 (40%), Gaps = 15/134 (11%)
Frame = +1
Query: 139 VCYKCNRTGHFARECTQ--------GGVVSRDSGFNRQR-------EKLLQVQPTGHFAR 273
VCY C + GH +R+C + G SGF L +G+
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 274 DCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCX 453
NG G + +C+NC + GH + +CPE +E + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 454 KSGHISRNCPDGTK 495
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 58.0 bits (134), Expect = 6e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +1
Query: 361 SCYNCNKTGHIARNCPEGGRESATQTCYNCXKSGHISRNCPDGTK 495
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = +1
Query: 139 VCYKCNRTGHFARECTQ-----GGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEADRCY 303
VCY C + GH +R+C + G SGF + F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 304 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 408
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 47.2 bits (107), Expect = 1e-05
Identities = 36/133 (27%), Positives = 50/133 (37%), Gaps = 15/133 (11%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEADRCYRCNGT- 318
C+ C + GH + +C + R+ Q GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 319 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCXK 456
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 457 SGHISRNCPDGTK 495
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 256 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 411
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 46.0 bits (104), Expect = 3e-05
Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 15/100 (15%)
Frame = +1
Query: 250 QPTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHI 393
Q GH + DC KE R CY C GH +R+C + P E S + G
Sbjct: 377 QQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGF 436
Query: 394 ARNCPEG---GRESATQTCYNCXKSGHISRNCPDGTKTCY 504
EG E C+NC GH S CP+ + C+
Sbjct: 437 GGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCF 476
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 418 RESATQTCYNCXKSGHISRNCPDGTK 495
R C+NC + GH S +CP+ K
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKK 277
Score = 29.9 bits (64), Expect = 1.9
Identities = 32/140 (22%), Positives = 47/140 (33%), Gaps = 22/140 (15%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEADRCYRCN--- 312
C+ C + GH + +C + R+ Q GH +RDC EE N
Sbjct: 259 CFNCQQPGHRSNDCP-------EPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 313 ------------GTGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATQ 435
GTG + + S + G + GG R
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 436 TCYNCXKSGHISRNCPDGTK 495
C+NC + GH S +CP+ K
Sbjct: 372 NCFNCQQPGHRSNDCPEPKK 391
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 54.8 bits (126), Expect = 6e-08
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +1
Query: 361 SCYNCNKTGHIARNCPEGGRESATQTCYNCXKSGHISRNCPDGTK 495
+C+NC + GH + +CPE +E + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/114 (28%), Positives = 40/114 (35%), Gaps = 17/114 (14%)
Frame = +1
Query: 214 GFNRQREKLLQVQPTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYN 372
G + Q GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 373 CNKTGHIARNCPE----------GGRESATQTCYNCXKSGHISRNCPDGTKTCY 504
N GG E C+NC GH S CP+ + C+
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCF 265
Score = 44.0 bits (99), Expect = 1e-04
Identities = 36/135 (26%), Positives = 51/135 (37%), Gaps = 17/135 (12%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEAD-RCYRCNGT 318
C+ C + GH + +C + R+ Q GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 319 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATQTCYNC 450
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 451 XKSGHISRNCPDGTK 495
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 37.1 bits (82), Expect = 0.013
Identities = 29/101 (28%), Positives = 39/101 (38%), Gaps = 27/101 (26%)
Frame = +1
Query: 139 VCYKCNRTGHFARECTQ-------------GGV----------VSRDSGFNRQRE----K 237
VCY C + GH +RECT+ GG D GF E K
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243
Query: 238 LLQVQPTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 360
+ GH + +C E C+ C GH + EC +P +P
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 54.8 bits (126), Expect = 6e-08
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +1
Query: 361 SCYNCNKTGHIARNCPEGGRESATQTCYNCXKSGHISRNCPDGTK 495
+C+NC + GH + +CPE +E + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/114 (28%), Positives = 40/114 (35%), Gaps = 17/114 (14%)
Frame = +1
Query: 214 GFNRQREKLLQVQPTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYN 372
G + Q GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 373 CNKTGHIARNCPE----------GGRESATQTCYNCXKSGHISRNCPDGTKTCY 504
N GG E C+NC GH S CP+ + C+
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCF 265
Score = 44.0 bits (99), Expect = 1e-04
Identities = 36/135 (26%), Positives = 51/135 (37%), Gaps = 17/135 (12%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEAD-RCYRCNGT 318
C+ C + GH + +C + R+ Q GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 319 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATQTCYNC 450
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 451 XKSGHISRNCPDGTK 495
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 37.1 bits (82), Expect = 0.013
Identities = 29/101 (28%), Positives = 39/101 (38%), Gaps = 27/101 (26%)
Frame = +1
Query: 139 VCYKCNRTGHFARECTQ-------------GGV----------VSRDSGFNRQRE----K 237
VCY C + GH +RECT+ GG D GF E K
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243
Query: 238 LLQVQPTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 360
+ GH + +C E C+ C GH + EC +P +P
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 54.8 bits (126), Expect = 6e-08
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +1
Query: 361 SCYNCNKTGHIARNCPEGGRESATQTCYNCXKSGHISRNCPDGTK 495
+C+NC + GH + +CPE +E + CYNC + GH SR C + K
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/114 (28%), Positives = 40/114 (35%), Gaps = 17/114 (14%)
Frame = +1
Query: 214 GFNRQREKLLQVQPTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYN 372
G + Q GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 373 CNKTGHIARNCPE----------GGRESATQTCYNCXKSGHISRNCPDGTKTCY 504
N GG E C+NC GH S CP+ + C+
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCF 265
Score = 44.0 bits (99), Expect = 1e-04
Identities = 36/135 (26%), Positives = 51/135 (37%), Gaps = 17/135 (12%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEAD-RCYRCNGT 318
C+ C + GH + +C + R+ Q GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 319 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATQTCYNC 450
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 451 XKSGHISRNCPDGTK 495
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 37.1 bits (82), Expect = 0.013
Identities = 29/101 (28%), Positives = 39/101 (38%), Gaps = 27/101 (26%)
Frame = +1
Query: 139 VCYKCNRTGHFARECTQ-------------GGV----------VSRDSGFNRQRE----K 237
VCY C + GH +RECT+ GG D GF E K
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243
Query: 238 LLQVQPTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 360
+ GH + +C E C+ C GH + EC +P +P
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 47.6 bits (108), Expect = 9e-06
Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 4/109 (3%)
Frame = +1
Query: 190 GGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEADRCYRCNGTGHIARECAQ---SPDEP 360
G V D+ +R K + + G +D K C+ C GH +C + S +
Sbjct: 197 GKVTVADAMLLVKRWKTRETRRIGR--QDQKITGSACFHCREPGHRLADCPKRNSSSSDG 254
Query: 361 SCYNCNKTGHIARNCPEGGRESATQ-TCYNCXKSGHISRNCPDGTKTCY 504
C+ C H C + G + TC+ C + GHISR+C Y
Sbjct: 255 VCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVGHISRDCHQNVNGVY 303
Score = 47.6 bits (108), Expect = 9e-06
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 11/112 (9%)
Frame = +1
Query: 127 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEADR--- 297
++ S C+ C GH +C + S D + H +CK++ +
Sbjct: 226 ITGSACFHCREPGHRLADCPKRNSSSSDG-------VCFKCGSMEHSIHECKKKGVKGFP 278
Query: 298 ---CYRCNGTGHIARECAQS-----PDEPSCYNCNKTGHIARNCPEGGRESA 429
C+ C GHI+R+C Q+ PD C C H+ R+CPE + A
Sbjct: 279 YATCFVCKQVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRRDCPELAAQKA 330
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 37.1 bits (82), Expect = 0.013
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 364 CYNCNKTGHIARNCPEGGRESATQTCYNCXKSGHISRNC 480
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.030
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +1
Query: 259 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 414
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 37.1 bits (82), Expect = 0.013
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 364 CYNCNKTGHIARNCPEGGRESATQTCYNCXKSGHISRNC 480
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.030
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +1
Query: 259 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 414
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 289 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 411
+ +C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 653 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 692
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +1
Query: 289 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCXKS 459
+DRC C G C++ S D S C C ++G +C + + C+ C +
Sbjct: 628 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 683
Query: 460 GHISRNCP 483
GHI+ NCP
Sbjct: 684 GHIAWNCP 691
Score = 31.5 bits (68), Expect = 0.64
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +1
Query: 133 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEADR-CYRC 309
S C C + G C++ S+D+ +K + Q +G C + +R C+RC
Sbjct: 628 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 680
Query: 310 NGTGHIARECAQSPDEPS 363
N GHIA C + + S
Sbjct: 681 NEMGHIAWNCPKKNENTS 698
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 289 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 411
+ +C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 556 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 595
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +1
Query: 289 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCXKS 459
+DRC C G C++ S D S C C ++G +C + + C+ C +
Sbjct: 531 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 586
Query: 460 GHISRNCP 483
GHI+ NCP
Sbjct: 587 GHIAWNCP 594
Score = 31.5 bits (68), Expect = 0.64
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +1
Query: 133 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEADR-CYRC 309
S C C + G C++ S+D+ +K + Q +G C + +R C+RC
Sbjct: 531 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 583
Query: 310 NGTGHIARECAQSPDEPS 363
N GHIA C + + S
Sbjct: 584 NEMGHIAWNCPKKNENTS 601
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 289 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 411
+ +C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 567 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 606
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +1
Query: 289 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCXKS 459
+DRC C G C++ S D S C C ++G +C + + C+ C +
Sbjct: 542 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 597
Query: 460 GHISRNCP 483
GHI+ NCP
Sbjct: 598 GHIAWNCP 605
Score = 31.5 bits (68), Expect = 0.64
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +1
Query: 133 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEADR-CYRC 309
S C C + G C++ S+D+ +K + Q +G C + +R C+RC
Sbjct: 542 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 594
Query: 310 NGTGHIARECAQSPDEPS 363
N GHIA C + + S
Sbjct: 595 NEMGHIAWNCPKKNENTS 612
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 36.7 bits (81), Expect = 0.017
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 433 QTCYNCXKSGHISRNCPDG 489
+ CY C + GHISRNCP+G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
Score = 35.5 bits (78), Expect = 0.039
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 361 SCYNCNKTGHIARNCPEG 414
+CY C + GHI+RNCP G
Sbjct: 5 NCYKCQQPGHISRNCPNG 22
Score = 31.9 bits (69), Expect = 0.48
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 127 MSSSVCYKCNRTGHFARECTQG 192
MS CYKC + GH +R C G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = +1
Query: 268 ARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYN 447
A+ +A C+ C+ GH A C P + N + + + + + TCY
Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYK 254
Query: 448 CXKSGHISRNCPDG 489
C + GH + C G
Sbjct: 255 CGEKGHYANRCHKG 268
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = +1
Query: 100 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDC 279
A +KP + C+ C+ GH A C +R + + R L + D
Sbjct: 192 AVSHAKPTYSQAITCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIP-------DK 244
Query: 280 KEEAD-RCYRCNGTGHIAREC 339
K +D CY+C GH A C
Sbjct: 245 KNLSDVTCYKCGEKGHYANRC 265
Score = 31.9 bits (69), Expect = 0.48
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 127 MSSSVCYKCNRTGHFARECTQGGV 198
+S CYKC GH+A C +G +
Sbjct: 247 LSDVTCYKCGEKGHYANRCHKGAL 270
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
Frame = +1
Query: 259 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS-----CYNCNKTGHIARNCPEGGRE 423
GH A C + R N H + + PD+ + CY C + GH A C +G
Sbjct: 213 GHKATTCPHLPGQT-RQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANRCHKGALA 271
Query: 424 SATQTCY 444
+ T +
Sbjct: 272 FLSNTAH 278
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 34.7 bits (76), Expect = 0.068
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 361 SCYNCNKTGHIARNCPEGGRESATQTCYNCXKSGHISRNCPDGTK 495
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +1
Query: 289 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 444
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
Score = 28.7 bits (61), Expect(2) = 0.027
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 259 GHFARDCKEEADRCYRCNGTGHIARECA 342
GH A +C C C H A ECA
Sbjct: 211 GHRATECSAPQRECANCGDPNHRANECA 238
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 430 TQTCYNCXKSGHISRNCPDGTKTC 501
+ TC+NC K GH + C + C
Sbjct: 201 SNTCFNCKKYGHRATECSAPQREC 224
Score = 26.2 bits (55), Expect(2) = 0.027
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 133 SSVCYKCNRTGHFARECT 186
S+ C+ C + GH A EC+
Sbjct: 201 SNTCFNCKKYGHRATECS 218
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 34.7 bits (76), Expect = 0.068
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 361 SCYNCNKTGHIARNCPEGGRESATQTCYNCXKSGHISRNCPDGTK 495
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +1
Query: 289 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 444
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
Score = 28.7 bits (61), Expect(2) = 0.027
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 259 GHFARDCKEEADRCYRCNGTGHIARECA 342
GH A +C C C H A ECA
Sbjct: 211 GHRATECSAPQRECANCGDPNHRANECA 238
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 430 TQTCYNCXKSGHISRNCPDGTKTC 501
+ TC+NC K GH + C + C
Sbjct: 201 SNTCFNCKKYGHRATECSAPQREC 224
Score = 26.2 bits (55), Expect(2) = 0.027
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 133 SSVCYKCNRTGHFARECT 186
S+ C+ C + GH A EC+
Sbjct: 201 SNTCFNCKKYGHRATECS 218
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 295 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 423
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 156
Score = 35.1 bits (77), Expect = 0.052
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 364 CYNCNKTG-HIARNCPEGGRESATQTCYNCXKSGHISRNCPD 486
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 113 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 152
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 295 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 423
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 35.1 bits (77), Expect = 0.052
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 364 CYNCNKTG-HIARNCPEGGRESATQTCYNCXKSGHISRNCPD 486
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 295 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 423
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 35.1 bits (77), Expect = 0.052
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 364 CYNCNKTG-HIARNCPEGGRESATQTCYNCXKSGHISRNCPD 486
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 295 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 423
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 35.1 bits (77), Expect = 0.052
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 364 CYNCNKTG-HIARNCPEGGRESATQTCYNCXKSGHISRNCPD 486
C+ C K H A++CP ++ + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +1
Query: 298 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCXKSGHISRN 477
C +C+GT + + SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +1
Query: 298 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCXKSGHISRN 477
C +C+GT + + SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 298 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGG 417
CY+C GH++++C QS N KT H N E G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVG 351
Score = 32.3 bits (70), Expect = 0.36
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 358 PSCYNCNKTGHIARNCPEGGRES 426
P CY C GH++++CP+ S
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQGGVVSRDSGF-NRQRE 234
CYKC GH +++C Q S +SG NR+ E
Sbjct: 313 CYKCKVVGHVSKDCPQS---STNSGVTNRKTE 341
Score = 28.7 bits (61), Expect = 4.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 439 CYNCXKSGHISRNCPDGT 492
CY C GH+S++CP +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +1
Query: 325 IARECAQ--SPDEPSCYNCNKTGHIARNCPEG--GRESATQTCYNCXKSGHISRNCPDGT 492
+ R+C Q +P + C+ C++ GH +CP+ +E+ + N S + S + G
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGF 1401
Query: 493 K 495
K
Sbjct: 1402 K 1402
Score = 27.9 bits (59), Expect = 7.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQ 189
C++C+R GHF C Q
Sbjct: 1357 CHQCHRIGHFVESCPQ 1372
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 31.9 bits (69), Expect = 0.48
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 4/116 (3%)
Frame = +1
Query: 148 KCNRTGHFARECTQGGVVSRDSGFN---RQREKLLQVQPTGHFARDCKEEADRCYRCNGT 318
K N++ + + V ++S F+ +Q+E + + F + + +
Sbjct: 519 KKNQSEKNGNKISNASEVQKNSNFHNAPKQQENFRKAEDQNWFNKKSLQTSSDQVNVPEN 578
Query: 319 GHIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCXKSGHISRNCP 483
G I EC Q EPSC KT R P+ C+ C + GHIS CP
Sbjct: 579 G-ICAECKQVGGHEPSCSLAPKTWKRERPPPQ---------CFTCGEMGHISTYCP 624
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = +1
Query: 298 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 411
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 31.5 bits (68), Expect = 0.64
Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = -2
Query: 496 SWCRRDSCGRCGRTCXSYSRSASQTPAPPRDSSVRCG-PSCCSCNMTARPGSVRTRALCA 320
S C S G CG+TC APP S CG P C C V T C
Sbjct: 64 SGCGCGSMGMCGQTCCP--------SAPPPCS---CGTPGCMQCVQQTVLVPVTTTTCCK 112
Query: 319 QCRYICSN 296
C+ +C+N
Sbjct: 113 CCQPVCTN 120
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 31.1 bits (67), Expect = 0.84
Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 11/93 (11%)
Frame = +1
Query: 244 QVQPTGHFARDCKEEADRCY--RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP--- 408
QV P G F CKE+ RC CN + + C PSC +G NC
Sbjct: 1414 QVCPEGRFGAGCKEKC-RCANGHCNASSGECK-CNLGFTGPSCEQSCPSGKYGLNCTLDC 1471
Query: 409 ---EGGRESATQTCYNCXKSGHISR---NCPDG 489
R Q C +C + SR +CP+G
Sbjct: 1472 ECYGQARCDPVQGCCDCPPGRYGSRCQFSCPNG 1504
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 31.1 bits (67), Expect = 0.84
Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 11/93 (11%)
Frame = +1
Query: 244 QVQPTGHFARDCKEEADRCY--RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP--- 408
QV P G F CKE+ RC CN + + C PSC +G NC
Sbjct: 1414 QVCPEGRFGAGCKEKC-RCANGHCNASSGECK-CNLGFTGPSCEQSCPSGKYGLNCTLDC 1471
Query: 409 ---EGGRESATQTCYNCXKSGHISR---NCPDG 489
R Q C +C + SR +CP+G
Sbjct: 1472 ECYGQARCDPVQGCCDCPPGRYGSRCQFSCPNG 1504
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 7/76 (9%)
Frame = -2
Query: 487 RRDSCGRCGRTCXSYSRSASQ-TPAPPRDSSVRC-GPSC---CS--CNMTARPGSVRTRA 329
RR CGR +C S S S S P C P C CS CN ++ +
Sbjct: 31 RRQCCGRSSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQQQCSNQCNQQCTSITISSGP 90
Query: 328 LCAQCRYICSNGQPLP 281
C+ C+ CS+ P
Sbjct: 91 SCSSCQSACSSACTTP 106
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -2
Query: 469 RCGRTCXSYSRSASQTPAP-PRDSSVRCGPSCCSCNMTARPGSVRTRALC-AQCRYICSN 296
RC TC + + P P PR S+ C PSC P V+ +LC QCR +C+N
Sbjct: 240 RCLPTCIQQIQISVPLPPPAPRCDSM-CMPSC-------SPSCVQQYSLCPQQCRPMCTN 291
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEADRCYRCN-GT 318
CY C + GH A EC + D N +R+ Q + R + D Y + T
Sbjct: 411 CYYCGKRGHTANECRR---KKSDESQNGERQDPSQSEQIAALRRQLAMQNDDPYSSDEST 467
Query: 319 GHIARECAQSPDEPS 363
++ C + ++P+
Sbjct: 468 EALSLSCQKPKEDPT 482
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/76 (23%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +1
Query: 277 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCX 453
C+E+ D C + C S D +C + C+ I + P + Q+ Y C
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 454 KSGHISRNCPDGTKTC 501
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 731 VYIQVNSRTSLFSLWTRTPICICTVIGYRV 642
+ QV S +S WTR + TVIGYR+
Sbjct: 570 IQCQVTSESSAHCHWTRHHDAMQTVIGYRI 599
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/76 (23%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +1
Query: 277 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCX 453
C+E+ D C + C S D +C + C+ I + P + Q+ Y C
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 454 KSGHISRNCPDGTKTC 501
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 731 VYIQVNSRTSLFSLWTRTPICICTVIGYRV 642
+ QV S +S WTR + TVIGYR+
Sbjct: 570 IQCQVTSESSAHCHWTRHHDAMQTVIGYRI 599
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +1
Query: 268 ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGH----IARNCPE 411
A+ C+ D + Y+ GH R+C D P Y C K G I +NCP+
Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = -2
Query: 466 CGRTCXSYSRSASQTPAP-PRDSSVRCGPSCCSCNMTARPGSVRTRALCAQ-CRYICSNG 293
C +TC + S +Q AP P C P+C + P +V+ C Q C C
Sbjct: 107 CQQTCQT-SSCYTQIAAPAPVQCQPSCMPACEQSCVAPAPVTVQCVPQCQQKCTQQCVQA 165
Query: 292 QPL-PCNP 272
QP+ C P
Sbjct: 166 QPIQQCQP 173
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = -2
Query: 466 CGRTCXSYSRSASQTPAP-PRDSSVRCGPSCCSCNMTARPGSVRTRALCAQ-CRYICSNG 293
C +TC + S +Q AP P C P+C + P +V+ C Q C C
Sbjct: 108 CQQTCQT-SSCYTQIAAPAPVQCQPSCMPACEQSCVAPAPVTVQCVPQCQQKCTQQCVQA 166
Query: 292 QPL-PCNP 272
QP+ C P
Sbjct: 167 QPIQQCQP 174
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/37 (27%), Positives = 15/37 (40%)
Frame = +1
Query: 142 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQ 252
C+ C GH AR C + + G+ Q + Q
Sbjct: 576 CHYCKNVGHMARNCKKKAFAEKRKGYEDQARSITSCQ 612
>AF039046-14|AAB94214.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 54
protein.
Length = 388
Score = 29.5 bits (63), Expect = 2.6
Identities = 27/130 (20%), Positives = 45/130 (34%), Gaps = 4/130 (3%)
Frame = -2
Query: 502 STSWCRRDSCGRCGRTCXS-YSRSASQTPAPPRDSSVRCGPSCCS-CNMTARPGSVRTRA 329
S + C+ +C C Y+ A+ TPAP C C S C +P S
Sbjct: 98 SVAQCQPQCQQQCQSQCAPMYNPPATTTPAPVVQCQPMCQQQCQSTCVQQQQPASQCQPQ 157
Query: 328 LCAQCRYICSNGQPLPCNPSQSVLWVALEATSHVADXXXXXXXXXXXACIRARNARSGC- 152
QC C P + V+ + LE A +C + + + C
Sbjct: 158 CQQQCNVACD--APATSTQAPQVVHIQLEIQQAQAQCQPQCQQQCQSSCTQQQQPANQCN 215
Query: 151 -TCSKRLNSL 125
C+ + +++
Sbjct: 216 SACNSQCSNI 225
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 439 CYNCXKSGHISRNCP 483
C++C + GHISR CP
Sbjct: 170 CFHCQEHGHISRMCP 184
Score = 28.3 bits (60), Expect = 5.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 364 CYNCNKTGHIARNCPE 411
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 283 EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 390
E + C C+GT + + D SC++C ++GH
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH 287
>Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical
protein F09B12.1a protein.
Length = 573
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -2
Query: 454 CXSYSRSASQTPAPPRDSSVRCGPSCCSCNMTARPGSVRTRALCAQ 317
C S+ + Q AP + + C P CC C+ A+PG A A+
Sbjct: 17 CFPTSQRSYQYGAPTQQFAA-CTPQCCGCSQ-AQPGPQPAAAAAAR 60
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/79 (26%), Positives = 33/79 (41%)
Frame = +1
Query: 247 VQPTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRES 426
+ P+ H + E D R N HI + ++ D+ S + + G + G
Sbjct: 104 LDPSSHISSAEFENMDEAERLN---HIRDQSTRAYDQ-SNFRRRQPGIMT------GPPP 153
Query: 427 ATQTCYNCXKSGHISRNCP 483
T TC C + GH +NCP
Sbjct: 154 PTYTCNRCSQPGHWYKNCP 172
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/79 (26%), Positives = 33/79 (41%)
Frame = +1
Query: 247 VQPTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRES 426
+ P+ H + E D R N HI + ++ D+ S + + G + G
Sbjct: 104 LDPSSHISSAEFENMDEAERLN---HIRDQSTRAYDQ-SNFRRRQPGIMT------GPPP 153
Query: 427 ATQTCYNCXKSGHISRNCP 483
T TC C + GH +NCP
Sbjct: 154 PTYTCNRCSQPGHWYKNCP 172
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +1
Query: 283 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 450
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 451 XKSGHISRNCPDGTKTC 501
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +1
Query: 283 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 450
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 451 XKSGHISRNCPDGTKTC 501
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>Z30423-11|CAD27184.1| 237|Caenorhabditis elegans Hypothetical
protein T20G5.13 protein.
Length = 237
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +3
Query: 471 PQLSRRHQDVLRVXKPGHISRECDEARN*PQXPCLPYNQLC 593
P+ + +H V R+ P I R C EAR P CL QLC
Sbjct: 88 PEKTSQHLSVDRLTNPNFIFRSCCEARGLPD-SCL---QLC 124
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +1
Query: 145 YKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEADRCYRCNGTGH 324
Y C G+ A + Q + + GF QR ++ G D + C R NGT +
Sbjct: 278 YVCQNDGYCAHDSNQMPICYCEQGFTGQRCEIECPSGFGGIHCDLPLQRPHCSRSNGTCY 337
Query: 325 IAREC 339
C
Sbjct: 338 NDGRC 342
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +1
Query: 145 YKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEADRCYRCNGTGH 324
Y C G+ A + Q + + GF QR ++ G D + C R NGT +
Sbjct: 278 YVCQNDGYCAHDSNQMPICYCEQGFTGQRCEIECPSGFGGIHCDLPLQRPHCSRSNGTCY 337
Query: 325 IAREC 339
C
Sbjct: 338 NDGRC 342
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein (
C.elegans glp-1 gene,complete cds. ).
Length = 1295
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +1
Query: 145 YKCNRTGHFARECTQGGVVSRDSGFNRQREKLLQVQPTGHFARDCKEEADRCYRCNGTGH 324
Y C G+ A + Q + + GF QR ++ G D + C R NGT +
Sbjct: 278 YVCQNDGYCAHDSNQMPICYCEQGFTGQRCEIECPSGFGGIHCDLPLQRPHCSRSNGTCY 337
Query: 325 IAREC 339
C
Sbjct: 338 NDGRC 342
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 731 VYIQVNSRTSLFSLWTRTPICICTVIGYRV 642
+ QV S +S WTR + TVIGYR+
Sbjct: 570 IQCQVTSESSAHCHWTRHHDAMQTVIGYRI 599
>AC024859-26|AAK29977.2| 300|Caenorhabditis elegans Hypothetical
protein Y71H2AM.2 protein.
Length = 300
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = -2
Query: 454 CXSYSRSASQTPAPPRDSSVRCGPSCCSCNMTARPGSVRTRALCAQCRYI 305
C S + PAPP VRC C+C + + S R CR +
Sbjct: 81 CHSCDEATPIRPAPPGKKYVRCP---CNCLLICKASSTRIACPRNNCRRV 127
>AC006777-5|AAK72311.1| 247|Caenorhabditis elegans Hypothetical
protein Y46H3D.8 protein.
Length = 247
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -2
Query: 517 GLXTRSTSWCRRDSCGRCGRTCXSYSRSASQTPAPPRDSSVRCGPSCCS--CNMTARPGS 344
GL ++C++ +C RC + + S S+S + DSS C + C T +
Sbjct: 176 GLQDFVNTYCQK-TCSRCASSTTTASSSSSSCTSYTADSSSACASWAANGFCTNTFYTAA 234
Query: 343 VRTRALCAQCRYIC 302
R ++ CA +C
Sbjct: 235 TR-KSYCATTCKLC 247
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +1
Query: 283 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 450
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 451 XKSGHISRNCPDGTKTC 501
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = +1
Query: 283 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 450
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 451 XKSGHISRNCPDGTKTC 501
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,537,178
Number of Sequences: 27780
Number of extensions: 319928
Number of successful extensions: 1375
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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