Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0922
(810 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC054027-1|AAH54027.1| 370|Homo sapiens actin related protein 2... 138 3e-32
BC047889-1|AAH47889.2| 370|Homo sapiens actin related protein 2... 138 3e-32
BC039594-1|AAH39594.2| 370|Homo sapiens actin related protein 2... 138 3e-32
AK223015-1|BAD96735.1| 365|Homo sapiens actin related protein 2... 138 3e-32
AB209059-1|BAD92296.1| 401|Homo sapiens actin related protein 2... 138 3e-32
Y08999-1|CAA70203.1| 370|Homo sapiens Sop2p-like protein protein. 134 3e-31
BC007555-1|AAH07555.1| 372|Homo sapiens actin related protein 2... 130 4e-30
BC002988-1|AAH02988.2| 372|Homo sapiens actin related protein 2... 130 4e-30
BC002562-1|AAH02562.1| 372|Homo sapiens actin related protein 2... 130 4e-30
AF006084-1|AAB64189.1| 372|Homo sapiens p41-Arc protein. 130 4e-30
AC004834-1|AAS00381.1| 166|Homo sapiens unknown protein. 78 3e-14
AF217525-1|AAF27525.1| 2012|Homo sapiens Down syndrome cell adhe... 31 3.7
AF023450-1|AAC17967.1| 1571|Homo sapiens Down syndrome cell adhe... 31 3.7
AF023449-1|AAC17966.1| 1896|Homo sapiens Down syndrome cell adhe... 31 3.7
AB209136-1|BAD92373.1| 2023|Homo sapiens Down syndrome cell adhe... 31 3.7
Y12781-1|CAA73319.1| 577|Homo sapiens transducin (beta) like 1 ... 31 4.9
BC052304-1|AAH52304.1| 577|Homo sapiens transducin (beta)-like ... 31 4.9
BC032708-1|AAH32708.1| 526|Homo sapiens TBL1X protein protein. 31 4.9
AB209608-1|BAD92845.1| 540|Homo sapiens transducin beta-like 1X... 31 4.9
AL807776-1|CAH69985.2| 340|Homo sapiens ankyrin repeat and ster... 31 6.5
AL353782-2|CAH71295.2| 340|Homo sapiens ankyrin repeat and ster... 31 6.5
AK094247-1|BAC04317.1| 334|Homo sapiens protein ( Homo sapiens ... 31 6.5
AF193594-1|AAP97280.1| 357|Homo sapiens MD6b protein. 31 6.5
>BC054027-1|AAH54027.1| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 138 bits (333), Expect = 3e-32
Identities = 58/84 (69%), Positives = 70/84 (83%)
Frame = +2
Query: 2 NNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSK 181
N+WWVSKHIKKPIRSTV S+DWHPNN+LL AGS DFK RVFSAYIK+++++P WGSK
Sbjct: 129 NDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKPASTPWGSK 188
Query: 182 LPLGQLLAEFPNSPSGGGWVHSVS 253
+P GQL++EF S + GGWVH VS
Sbjct: 189 MPFGQLMSEFGGSGT-GGWVHGVS 211
Score = 78.6 bits (185), Expect = 2e-14
Identities = 34/75 (45%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 SADGNKVAWVAHDSSINVTDATKGRAVIKLKTEYLXFLGCSWITNNSLIVAGHSCIPLLY 435
SA G+++AWV+HDS+++V DA+K V LKTE+L L S+++ NS++ AGH C P+L+
Sbjct: 213 SASGSRLAWVSHDSTVSVADASKSVQVSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLF 272
Query: 436 CHDGDD-IKYVAKLD 477
+D + +V+KLD
Sbjct: 273 NYDDRGCLTFVSKLD 287
Score = 63.3 bits (147), Expect = 1e-09
Identities = 25/61 (40%), Positives = 43/61 (70%)
Frame = +3
Query: 510 AMKKFQSLDRHARIETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLD 689
AM++F+++D+ A E +T L+++HQN+I+ ++IY+ K KF T+G+DG + IWD
Sbjct: 299 AMERFRNMDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFK 358
Query: 690 T 692
T
Sbjct: 359 T 359
>BC047889-1|AAH47889.2| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 138 bits (333), Expect = 3e-32
Identities = 58/84 (69%), Positives = 70/84 (83%)
Frame = +2
Query: 2 NNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSK 181
N+WWVSKHIKKPIRSTV S+DWHPNN+LL AGS DFK RVFSAYIK+++++P WGSK
Sbjct: 129 NDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKPASTPWGSK 188
Query: 182 LPLGQLLAEFPNSPSGGGWVHSVS 253
+P GQL++EF S + GGWVH VS
Sbjct: 189 MPFGQLMSEFGGSGT-GGWVHGVS 211
Score = 78.6 bits (185), Expect = 2e-14
Identities = 34/75 (45%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 SADGNKVAWVAHDSSINVTDATKGRAVIKLKTEYLXFLGCSWITNNSLIVAGHSCIPLLY 435
SA G+++AWV+HDS+++V DA+K V LKTE+L L S+++ NS++ AGH C P+L+
Sbjct: 213 SASGSRLAWVSHDSTVSVADASKSVQVSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLF 272
Query: 436 CHDGDD-IKYVAKLD 477
+D + +V+KLD
Sbjct: 273 NYDDRGCLTFVSKLD 287
Score = 63.3 bits (147), Expect = 1e-09
Identities = 25/61 (40%), Positives = 43/61 (70%)
Frame = +3
Query: 510 AMKKFQSLDRHARIETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLD 689
AM++F+++D+ A E +T L+++HQN+I+ ++IY+ K KF T+G+DG + IWD
Sbjct: 299 AMERFRNMDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFK 358
Query: 690 T 692
T
Sbjct: 359 T 359
>BC039594-1|AAH39594.2| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 138 bits (333), Expect = 3e-32
Identities = 58/84 (69%), Positives = 70/84 (83%)
Frame = +2
Query: 2 NNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSK 181
N+WWVSKHIKKPIRSTV S+DWHPNN+LL AGS DFK RVFSAYIK+++++P WGSK
Sbjct: 129 NDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKPASTPWGSK 188
Query: 182 LPLGQLLAEFPNSPSGGGWVHSVS 253
+P GQL++EF S + GGWVH VS
Sbjct: 189 MPFGQLMSEFGGSGT-GGWVHGVS 211
Score = 78.6 bits (185), Expect = 2e-14
Identities = 34/75 (45%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 SADGNKVAWVAHDSSINVTDATKGRAVIKLKTEYLXFLGCSWITNNSLIVAGHSCIPLLY 435
SA G+++AWV+HDS+++V DA+K V LKTE+L L S+++ NS++ AGH C P+L+
Sbjct: 213 SASGSRLAWVSHDSTVSVADASKSVQVSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLF 272
Query: 436 CHDGDD-IKYVAKLD 477
+D + +V+KLD
Sbjct: 273 NYDDRGCLTFVSKLD 287
Score = 63.3 bits (147), Expect = 1e-09
Identities = 25/61 (40%), Positives = 43/61 (70%)
Frame = +3
Query: 510 AMKKFQSLDRHARIETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLD 689
AM++F+++D+ A E +T L+++HQN+I+ ++IY+ K KF T+G+DG + IWD
Sbjct: 299 AMERFRNMDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFK 358
Query: 690 T 692
T
Sbjct: 359 T 359
>AK223015-1|BAD96735.1| 365|Homo sapiens actin related protein 2/3
complex subunit 1A variant protein.
Length = 365
Score = 138 bits (333), Expect = 3e-32
Identities = 58/84 (69%), Positives = 70/84 (83%)
Frame = +2
Query: 2 NNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSK 181
N+WWVSKHIKKPIRSTV S+DWHPNN+LL AGS DFK RVFSAYIK+++++P WGSK
Sbjct: 124 NDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKPASTPWGSK 183
Query: 182 LPLGQLLAEFPNSPSGGGWVHSVS 253
+P GQL++EF S + GGWVH VS
Sbjct: 184 MPFGQLMSEFGGSGT-GGWVHGVS 206
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/75 (45%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 SADGNKVAWVAHDSSINVTDATKGRAVIKLKTEYLXFLGCSWITNNSLIVAGHSCIPLLY 435
SA G+++AWV+HDS+++V DA+K V LKTE+L L S+++ NS++ AGH C P+L+
Sbjct: 208 SASGSRLAWVSHDSTVSVADASKSVQVSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLF 267
Query: 436 CHDGDD-IKYVAKLD 477
+D + +V+KLD
Sbjct: 268 NYDDHGCLTFVSKLD 282
Score = 63.3 bits (147), Expect = 1e-09
Identities = 25/61 (40%), Positives = 43/61 (70%)
Frame = +3
Query: 510 AMKKFQSLDRHARIETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLD 689
AM++F+++D+ A E +T L+++HQN+I+ ++IY+ K KF T+G+DG + IWD
Sbjct: 294 AMERFRNMDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFK 353
Query: 690 T 692
T
Sbjct: 354 T 354
>AB209059-1|BAD92296.1| 401|Homo sapiens actin related protein 2/3
complex subunit 1A variant protein.
Length = 401
Score = 138 bits (333), Expect = 3e-32
Identities = 58/84 (69%), Positives = 70/84 (83%)
Frame = +2
Query: 2 NNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSK 181
N+WWVSKHIKKPIRSTV S+DWHPNN+LL AGS DFK RVFSAYIK+++++P WGSK
Sbjct: 160 NDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKPASTPWGSK 219
Query: 182 LPLGQLLAEFPNSPSGGGWVHSVS 253
+P GQL++EF S + GGWVH VS
Sbjct: 220 MPFGQLMSEFGGSGT-GGWVHGVS 242
Score = 78.6 bits (185), Expect = 2e-14
Identities = 34/75 (45%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 SADGNKVAWVAHDSSINVTDATKGRAVIKLKTEYLXFLGCSWITNNSLIVAGHSCIPLLY 435
SA G+++AWV+HDS+++V DA+K V LKTE+L L S+++ NS++ AGH C P+L+
Sbjct: 244 SASGSRLAWVSHDSTVSVADASKSVQVSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLF 303
Query: 436 CHDGDD-IKYVAKLD 477
+D + +V+KLD
Sbjct: 304 NYDDRGCLTFVSKLD 318
Score = 63.3 bits (147), Expect = 1e-09
Identities = 25/61 (40%), Positives = 43/61 (70%)
Frame = +3
Query: 510 AMKKFQSLDRHARIETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLD 689
AM++F+++D+ A E +T L+++HQN+I+ ++IY+ K KF T+G+DG + IWD
Sbjct: 330 AMERFRNMDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFK 389
Query: 690 T 692
T
Sbjct: 390 T 390
>Y08999-1|CAA70203.1| 370|Homo sapiens Sop2p-like protein protein.
Length = 370
Score = 134 bits (325), Expect = 3e-31
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +2
Query: 2 NNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSK 181
N+WWVSKHIKKPIRSTV S+DWHPNN+LL AGS DFK RVFSAYIK+++++ WGSK
Sbjct: 129 NDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKKASTPWGSK 188
Query: 182 LPLGQLLAEFPNSPSGGGWVHSVS 253
+P GQL++EF S + GGWVH VS
Sbjct: 189 MPFGQLMSEFGGSGT-GGWVHGVS 211
Score = 79.4 bits (187), Expect = 1e-14
Identities = 34/75 (45%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 SADGNKVAWVAHDSSINVTDATKGRAVIKLKTEYLXFLGCSWITNNSLIVAGHSCIPLLY 435
SA G+++AWV+HDS+++V DA+K V LKTE+L L S+++ NS++ AGH C P+L+
Sbjct: 213 SASGSRLAWVSHDSTVSVADASKSVQVSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLF 272
Query: 436 CHDGDD-IKYVAKLD 477
+D + +V+KLD
Sbjct: 273 IYDDRGCLTFVSKLD 287
Score = 63.3 bits (147), Expect = 1e-09
Identities = 25/61 (40%), Positives = 43/61 (70%)
Frame = +3
Query: 510 AMKKFQSLDRHARIETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDLD 689
AM++F+++D+ A E +T L+++HQN+I+ ++IY+ K KF T+G+DG + IWD
Sbjct: 299 AMERFRNMDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFK 358
Query: 690 T 692
T
Sbjct: 359 T 359
>BC007555-1|AAH07555.1| 372|Homo sapiens actin related protein 2/3
complex, subunit 1B, 41kDa protein.
Length = 372
Score = 130 bits (315), Expect = 4e-30
Identities = 55/83 (66%), Positives = 66/83 (79%)
Frame = +2
Query: 2 NNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSK 181
N+WWV KHIKKPIRSTV S+DWHPNN+LL AGS DFK R+FSAYIK++E++P P WGSK
Sbjct: 129 NDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSK 188
Query: 182 LPLGQLLAEFPNSPSGGGWVHSV 250
+P G+L+ E S S GWVH V
Sbjct: 189 MPFGELMFE---SSSSCGWVHGV 208
Score = 72.1 bits (169), Expect = 2e-12
Identities = 31/63 (49%), Positives = 45/63 (71%)
Frame = +1
Query: 256 SADGNKVAWVAHDSSINVTDATKGRAVIKLKTEYLXFLGCSWITNNSLIVAGHSCIPLLY 435
SA G++VAWV+HDS++ + DA K AV L +E L L ++IT+NSL+ AGH C P+L+
Sbjct: 211 SASGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLALTFITDNSLVAAGHDCFPVLF 270
Query: 436 CHD 444
+D
Sbjct: 271 TYD 273
Score = 54.8 bits (126), Expect = 3e-07
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Frame = +3
Query: 501 GTVAMKKFQSLDRHARIE---TSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQL 671
G A ++FQ+LD+ A E + LDS+H+N++S I++ G K+ ++F T+G+DG +
Sbjct: 295 GLTARERFQNLDKKASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGM 354
Query: 672 VIWDL 686
IWD+
Sbjct: 355 SIWDV 359
>BC002988-1|AAH02988.2| 372|Homo sapiens actin related protein 2/3
complex, subunit 1B, 41kDa protein.
Length = 372
Score = 130 bits (315), Expect = 4e-30
Identities = 55/83 (66%), Positives = 66/83 (79%)
Frame = +2
Query: 2 NNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSK 181
N+WWV KHIKKPIRSTV S+DWHPNN+LL AGS DFK R+FSAYIK++E++P P WGSK
Sbjct: 129 NDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSK 188
Query: 182 LPLGQLLAEFPNSPSGGGWVHSV 250
+P G+L+ E S S GWVH V
Sbjct: 189 MPFGELMFE---SSSSCGWVHGV 208
Score = 72.1 bits (169), Expect = 2e-12
Identities = 31/63 (49%), Positives = 45/63 (71%)
Frame = +1
Query: 256 SADGNKVAWVAHDSSINVTDATKGRAVIKLKTEYLXFLGCSWITNNSLIVAGHSCIPLLY 435
SA G++VAWV+HDS++ + DA K AV L +E L L ++IT+NSL+ AGH C P+L+
Sbjct: 211 SASGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLALTFITDNSLVAAGHDCFPVLF 270
Query: 436 CHD 444
+D
Sbjct: 271 TYD 273
Score = 54.8 bits (126), Expect = 3e-07
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Frame = +3
Query: 501 GTVAMKKFQSLDRHARIE---TSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQL 671
G A ++FQ+LD+ A E + LDS+H+N++S I++ G K+ ++F T+G+DG +
Sbjct: 295 GLTARERFQNLDKKASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGM 354
Query: 672 VIWDL 686
IWD+
Sbjct: 355 SIWDV 359
>BC002562-1|AAH02562.1| 372|Homo sapiens actin related protein 2/3
complex, subunit 1B, 41kDa protein.
Length = 372
Score = 130 bits (315), Expect = 4e-30
Identities = 55/83 (66%), Positives = 66/83 (79%)
Frame = +2
Query: 2 NNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSK 181
N+WWV KHIKKPIRSTV S+DWHPNN+LL AGS DFK R+FSAYIK++E++P P WGSK
Sbjct: 129 NDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSK 188
Query: 182 LPLGQLLAEFPNSPSGGGWVHSV 250
+P G+L+ E S S GWVH V
Sbjct: 189 MPFGELMFE---SSSSCGWVHGV 208
Score = 72.1 bits (169), Expect = 2e-12
Identities = 31/63 (49%), Positives = 45/63 (71%)
Frame = +1
Query: 256 SADGNKVAWVAHDSSINVTDATKGRAVIKLKTEYLXFLGCSWITNNSLIVAGHSCIPLLY 435
SA G++VAWV+HDS++ + DA K AV L +E L L ++IT+NSL+ AGH C P+L+
Sbjct: 211 SASGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLALTFITDNSLVAAGHDCFPVLF 270
Query: 436 CHD 444
+D
Sbjct: 271 TYD 273
Score = 54.8 bits (126), Expect = 3e-07
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Frame = +3
Query: 501 GTVAMKKFQSLDRHARIE---TSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQL 671
G A ++FQ+LD+ A E + LDS+H+N++S I++ G K+ ++F T+G+DG +
Sbjct: 295 GLTARERFQNLDKKASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGM 354
Query: 672 VIWDL 686
IWD+
Sbjct: 355 SIWDV 359
>AF006084-1|AAB64189.1| 372|Homo sapiens p41-Arc protein.
Length = 372
Score = 130 bits (315), Expect = 4e-30
Identities = 55/83 (66%), Positives = 66/83 (79%)
Frame = +2
Query: 2 NNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSK 181
N+WWV KHIKKPIRSTV S+DWHPNN+LL AGS DFK R+FSAYIK++E++P P WGSK
Sbjct: 129 NDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSK 188
Query: 182 LPLGQLLAEFPNSPSGGGWVHSV 250
+P G+L+ E S S GWVH V
Sbjct: 189 MPFGELMFE---SSSSCGWVHGV 208
Score = 72.1 bits (169), Expect = 2e-12
Identities = 31/63 (49%), Positives = 45/63 (71%)
Frame = +1
Query: 256 SADGNKVAWVAHDSSINVTDATKGRAVIKLKTEYLXFLGCSWITNNSLIVAGHSCIPLLY 435
SA G++VAWV+HDS++ + DA K AV L +E L L ++IT+NSL+ AGH C P+L+
Sbjct: 211 SASGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLALTFITDNSLVAAGHDCFPVLF 270
Query: 436 CHD 444
+D
Sbjct: 271 TYD 273
Score = 54.8 bits (126), Expect = 3e-07
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Frame = +3
Query: 501 GTVAMKKFQSLDRHARIE---TSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQL 671
G A ++FQ+LD+ A E + LDS+H+N++S I++ G K+ ++F T+G+DG +
Sbjct: 295 GLTARERFQNLDKKASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGM 354
Query: 672 VIWDL 686
IWD+
Sbjct: 355 SIWDV 359
>AC004834-1|AAS00381.1| 166|Homo sapiens unknown protein.
Length = 166
Score = 78.2 bits (184), Expect = 3e-14
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +2
Query: 2 NNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSADFK 112
N+WWVSKHIKKPIRSTV S+DWHPNN+LL AGS DFK
Sbjct: 129 NDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFK 165
>AF217525-1|AAF27525.1| 2012|Homo sapiens Down syndrome cell
adhesion molecule protein.
Length = 2012
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +2
Query: 26 IKKPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPG 160
I + + +T + W + + LV+GS + YIKD++++ G
Sbjct: 147 IPSSVEAYITVVSWEKDTVSLVSGSRFLITSTGALYIKDVQNEDG 191
>AF023450-1|AAC17967.1| 1571|Homo sapiens Down syndrome cell
adhesion molecule protein.
Length = 1571
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +2
Query: 26 IKKPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPG 160
I + + +T + W + + LV+GS + YIKD++++ G
Sbjct: 147 IPSSVEAYITVVSWEKDTVSLVSGSRFLITSTGALYIKDVQNEDG 191
>AF023449-1|AAC17966.1| 1896|Homo sapiens Down syndrome cell
adhesion molecule protein.
Length = 1896
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +2
Query: 26 IKKPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPG 160
I + + +T + W + + LV+GS + YIKD++++ G
Sbjct: 133 IPSSVEAYITVVSWEKDTVSLVSGSRFLITSTGALYIKDVQNEDG 177
>AB209136-1|BAD92373.1| 2023|Homo sapiens Down syndrome cell
adhesion molecule isoform CHD2-42 precursor variant
protein.
Length = 2023
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +2
Query: 26 IKKPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPG 160
I + + +T + W + + LV+GS + YIKD++++ G
Sbjct: 158 IPSSVEAYITVVSWEKDTVSLVSGSRFLITSTGALYIKDVQNEDG 202
>Y12781-1|CAA73319.1| 577|Homo sapiens transducin (beta) like 1
protein protein.
Length = 577
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 35 PIRSTVTSIDWHPNNILLVAGSADFKVRVFS 127
P VTS+DW+ N LL GS D R+++
Sbjct: 286 PSNKDVTSLDWNTNGTLLATGSYDGFARIWT 316
>BC052304-1|AAH52304.1| 577|Homo sapiens transducin (beta)-like
1X-linked protein.
Length = 577
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 35 PIRSTVTSIDWHPNNILLVAGSADFKVRVFS 127
P VTS+DW+ N LL GS D R+++
Sbjct: 286 PSNKDVTSLDWNTNGTLLATGSYDGFARIWT 316
>BC032708-1|AAH32708.1| 526|Homo sapiens TBL1X protein protein.
Length = 526
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 35 PIRSTVTSIDWHPNNILLVAGSADFKVRVFS 127
P VTS+DW+ N LL GS D R+++
Sbjct: 235 PSNKDVTSLDWNTNGTLLATGSYDGFARIWT 265
>AB209608-1|BAD92845.1| 540|Homo sapiens transducin beta-like 1X
variant protein.
Length = 540
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 35 PIRSTVTSIDWHPNNILLVAGSADFKVRVFS 127
P VTS+DW+ N LL GS D R+++
Sbjct: 249 PSNKDVTSLDWNTNGTLLATGSYDGFARIWT 279
>AL807776-1|CAH69985.2| 340|Homo sapiens ankyrin repeat and sterile
alpha motif domain containing 6 protein.
Length = 340
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 191 GQLLAEFPNSPSGGGWVHSVSSLRTEIKLP-GSPTTAQST*PTL 319
G +E P SP+GG L T + P G+ TT++ST PTL
Sbjct: 163 GSSPSELPASPAGGSAPVGKQKLETSKRPPSGTSTTSKSTSPTL 206
>AL353782-2|CAH71295.2| 340|Homo sapiens ankyrin repeat and sterile
alpha motif domain containing 6 protein.
Length = 340
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 191 GQLLAEFPNSPSGGGWVHSVSSLRTEIKLP-GSPTTAQST*PTL 319
G +E P SP+GG L T + P G+ TT++ST PTL
Sbjct: 163 GSSPSELPASPAGGSAPVGKQKLETSKRPPSGTSTTSKSTSPTL 206
>AK094247-1|BAC04317.1| 334|Homo sapiens protein ( Homo sapiens
cDNA FLJ36928 fis, clone BRACE2005216, weakly similar to
Xenopus laevis bicaudal-C (Bic-C) mRNA. ).
Length = 334
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 191 GQLLAEFPNSPSGGGWVHSVSSLRTEIKLP-GSPTTAQST*PTL 319
G +E P SP+GG L T + P G+ TT++ST PTL
Sbjct: 157 GSSPSELPASPAGGSAPVGKQKLETSKRPPSGTSTTSKSTSPTL 200
>AF193594-1|AAP97280.1| 357|Homo sapiens MD6b protein.
Length = 357
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +2
Query: 23 HIKKPIRSTVTSIDWHPNNILLVAGSADFKVRVFS 127
+ K + TV S+D++ +LV+GSADF V+V++
Sbjct: 155 YYKDGLLCTVFSVDYNDELDILVSGSADFTVKVWA 189
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,198,294
Number of Sequences: 237096
Number of extensions: 2593255
Number of successful extensions: 6869
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6863
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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