Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0922
         (810 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110501-4|CAB54510.1|  368|Caenorhabditis elegans Hypothetical ...   128   4e-30
U23139-7|AAK31492.1|  929|Caenorhabditis elegans Hypothetical pr...    32   0.42 
U21322-6|AAN65314.2|  669|Caenorhabditis elegans Hypothetical pr...    30   2.3  
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z72502-4|CAA96589.1|  750|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z68227-4|CAA92518.1|  480|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z68227-3|CAA92519.1|  507|Caenorhabditis elegans Hypothetical pr...    29   3.9  
U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AL132904-13|CAC35846.4|  778|Caenorhabditis elegans Hypothetical...    29   3.9  
AF067942-4|AAG45573.2|  324|Caenorhabditis elegans Hypothetical ...    29   3.9  
Z74475-4|CAD01086.1|  185|Caenorhabditis elegans Hypothetical pr...    29   5.2  
AF106576-4|AAC78176.1|  473|Caenorhabditis elegans Hypothetical ...    29   5.2  
AF067944-4|AAC17670.2|  279|Caenorhabditis elegans Hypothetical ...    29   5.2  

>AL110501-4|CAB54510.1|  368|Caenorhabditis elegans Hypothetical
           protein Y79H2A.6 protein.
          Length = 368

 Score =  128 bits (310), Expect = 4e-30
 Identities = 53/84 (63%), Positives = 67/84 (79%)
 Frame = +2

Query: 2   NNWWVSKHIKKPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSK 181
           N+WWVSK IKKPIRSTVT +DWH NN+LL  GS DFK RVFSAY+K+++++P PN WG K
Sbjct: 135 NDWWVSKQIKKPIRSTVTCLDWHSNNVLLAVGSCDFKCRVFSAYVKEVDEKPSPNPWGQK 194

Query: 182 LPLGQLLAEFPNSPSGGGWVHSVS 253
           +P GQL++E+    S GGWVH V+
Sbjct: 195 MPFGQLMSEY----SVGGWVHRVA 214



 Score = 64.9 bits (151), Expect = 6e-11
 Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = +1

Query: 256 SADGNKVAWVAHDSSINVTDAT-KGRAVIKLKTEYLXFLGCSWITNNSLIVAGHSCIPLL 432
           S  G ++A+V+HDSS++  D+T   + V  L T +L F    WIT NS++ AGH C P+L
Sbjct: 216 SPSGCRLAFVSHDSSVSFVDSTVDSQKVQNLLTIHLPFTTVEWITENSVVTAGHDCSPVL 275

Query: 433 YCHDGDDIKYVAKLD 477
           +    D +K V KLD
Sbjct: 276 FVVSQDVLKEVCKLD 290



 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 22/59 (37%), Positives = 37/59 (62%)
 Frame = +3

Query: 510 AMKKFQSLDRHARIETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDL 686
           A++ F+++DR+   E  +  L ++HQN I+ I  + GT  +  KF+T G DG + +WDL
Sbjct: 303 ALQLFKNIDRNNAAEKINVALKTLHQNRITQILPHSGTVGNVVKFTTCGTDGIVALWDL 361


>U23139-7|AAK31492.1|  929|Caenorhabditis elegans Hypothetical
           protein F13H8.2 protein.
          Length = 929

 Score = 32.3 bits (70), Expect = 0.42
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +3

Query: 552 ETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDL 686
           E S+  + S H+ A++CI       S    F+T G DG +V+WD+
Sbjct: 92  EDSEPIMFSGHKKAVNCIEF----SSDGLLFATGGKDGVIVLWDI 132


>U21322-6|AAN65314.2|  669|Caenorhabditis elegans Hypothetical
           protein K10D2.1b protein.
          Length = 669

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = +2

Query: 50  VTSIDWHPNNILLVAGSADFKVRVFSA 130
           V +++W PN   L +GS D+++ +++A
Sbjct: 136 VLTVEWSPNGKYLASGSIDYRIIIYNA 162


>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
           protein K10D2.1a protein.
          Length = 1223

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = +2

Query: 50  VTSIDWHPNNILLVAGSADFKVRVFSA 130
           V +++W PN   L +GS D+++ +++A
Sbjct: 424 VLTVEWSPNGKYLASGSIDYRIIIYNA 450


>Z72502-4|CAA96589.1|  750|Caenorhabditis elegans Hypothetical
           protein C08B6.7 protein.
          Length = 750

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
 Frame = +1

Query: 226 RWRLGPQR-----FLSADGNKVAWVAHDSSINVTDATKGRAVIKLKTEYLXFLGCSWITN 390
           RW++G        F  +DG  +A V+HD  + + +      +  +K+ +   L  SW  +
Sbjct: 299 RWQIGEGSIHQFSFSGSDGKMMATVSHDGFLRIFNYHAQELLAVMKSYFGGLLTLSWSPD 358

Query: 391 NSLIVAG 411
             LI  G
Sbjct: 359 AKLIATG 365


>Z68227-4|CAA92518.1|  480|Caenorhabditis elegans Hypothetical
           protein F49C12.5b protein.
          Length = 480

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +3

Query: 507 VAMKKFQSLDRHARIETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGL 659
           +   K  SL R   + TS  F+    QN +  ++IYK   +H N +  S +
Sbjct: 118 IPFSKPSSLKRDVVVCTSPLFVSEQWQNFLFAVHIYKKFDAHMNLYLVSSI 168


>Z68227-3|CAA92519.1|  507|Caenorhabditis elegans Hypothetical
           protein F49C12.5a protein.
          Length = 507

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +3

Query: 507 VAMKKFQSLDRHARIETSDTFLDSIHQNAISCINIYKGTKSHTNKFSTSGL 659
           +   K  SL R   + TS  F+    QN +  ++IYK   +H N +  S +
Sbjct: 145 IPFSKPSSLKRDVVVCTSPLFVSEQWQNFLFAVHIYKKFDAHMNLYLVSSI 195


>U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical
           protein T10F2.4 protein.
          Length = 492

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +2

Query: 50  VTSIDWHPNNILLVAGSADFKVRVFSA 130
           + ++  HP+NI  ++ SAD  +RV+SA
Sbjct: 254 INAVVLHPDNITAISASADSHIRVWSA 280


>AL132904-13|CAC35846.4|  778|Caenorhabditis elegans Hypothetical
           protein Y111B2A.17 protein.
          Length = 778

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 582 HQNAISCINIYKGTKSHTNKFSTSGLDGQLVIWDL 686
           HQ  I+ +   K ++   ++F T G+D ++V+W L
Sbjct: 59  HQKPITVLKRLKSSEIVADEFVTGGVDSRVVLWKL 93


>AF067942-4|AAG45573.2|  324|Caenorhabditis elegans Hypothetical
           protein ZK6.6 protein.
          Length = 324

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 6   IGGCLSILRSPFVRL*HLLIGIPI 77
           +G C     SPF+ L H +IGIP+
Sbjct: 255 LGSCFIFFLSPFLNLYHYVIGIPL 278


>Z74475-4|CAD01086.1|  185|Caenorhabditis elegans Hypothetical
           protein R04F11.5 protein.
          Length = 185

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 12/39 (30%), Positives = 24/39 (61%)
 Frame = +2

Query: 83  LLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSKLPLGQL 199
           LLVA   + K+R++S+   +++D P   +W + + +G L
Sbjct: 118 LLVASDYNDKLRIYSSQDSNLKDWPWTELWRNIVDIGAL 156


>AF106576-4|AAC78176.1|  473|Caenorhabditis elegans Hypothetical
           protein W07E6.2 protein.
          Length = 473

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +2

Query: 50  VTSIDWHPNNILLVAGSADFKVRVFSAYIKDI-EDQPG 160
           V  + W  ++ LLV+GSAD  ++VF    K +  D PG
Sbjct: 405 VYQVAWSADSRLLVSGSADSTLKVFELKTKSLYYDLPG 442


>AF067944-4|AAC17670.2|  279|Caenorhabditis elegans Hypothetical
           protein K10C9.3 protein.
          Length = 279

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 415 SCIPLLYCHDGDDIKYV 465
           SCIPL Y HDG+   Y+
Sbjct: 10  SCIPLAYSHDGEPFDYL 26


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,045,023
Number of Sequences: 27780
Number of extensions: 376988
Number of successful extensions: 1100
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)