Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0922
         (810 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   3.3  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   5.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   5.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   7.7  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 88  EQNVIGMPINRCHSRTNGLLNMLR 17
           E   IG  +++CH+R     NM R
Sbjct: 700 EPQPIGKALSKCHNRNVTTCNMFR 723


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = -1

Query: 294 VVGDPGNFISVRREETLWTQPPPEGELGNSANSCPKGNLE 175
           VVG   N + +R EE +W +   +  +   +  C  G ++
Sbjct: 420 VVGKWFNSLDIRTEELIWARGTKDIPISACSLPCEPGMIK 459


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = -1

Query: 294 VVGDPGNFISVRREETLWTQPPPEGELGNSANSCPKGNLE 175
           VVG   N + +R EE +W +   +  +   +  C  G ++
Sbjct: 510 VVGKWFNSLDIRTEELIWARGTKDIPISACSLPCEPGMIK 549


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -1

Query: 705  MTSPKCPSPI*RAGRRD 655
            +TSP  P  I RAG RD
Sbjct: 1394 LTSPPTPLSISRAGSRD 1410


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -3

Query: 730 YLDNLDSFNDLSKVSKSHMTSWPSRPEVLNLLVCD 626
           YLD     NDL       ++S PS+    + L CD
Sbjct: 298 YLDEKLERNDLDLEKYEGISSTPSQASSCSCLDCD 332


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,815
Number of Sequences: 438
Number of extensions: 5056
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)