Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0921
         (829 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P35713 Cluster: Transcription factor SOX-18; n=6; Amnio...    36   1.2  
UniRef50_P43680 Cluster: Transcription factor SOX-18; n=7; Tetra...    34   5.0  
UniRef50_Q7UUT5 Cluster: Putative uncharacterized protein; n=1; ...    33   6.6  
UniRef50_A0H7T3 Cluster: Putative uncharacterized protein precur...    33   6.6  
UniRef50_A3HXH4 Cluster: Putative uncharacterized protein; n=1; ...    33   8.7  

>UniRef50_P35713 Cluster: Transcription factor SOX-18; n=6;
           Amniota|Rep: Transcription factor SOX-18 - Homo sapiens
           (Human)
          Length = 384

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +3

Query: 288 SSLSRSVSHCFRAPSQRA-RTAPPSAPLVFIY--TLGVGQTRPG 410
           + LSR    C+ AP   A RTAPP+APL  +Y  TLG     PG
Sbjct: 252 TELSRDPGGCYGAPLAEALRTAPPAAPLAGLYYGTLGTPGPYPG 295


>UniRef50_P43680 Cluster: Transcription factor SOX-18; n=7;
           Tetrapoda|Rep: Transcription factor SOX-18 - Mus
           musculus (Mouse)
          Length = 377

 Score = 33.9 bits (74), Expect = 5.0
 Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
 Frame = +3

Query: 294 LSRSVSHCFRAPSQRA-RTAPPSAPLVFIY--TLG 389
           L+R  S C+ AP   A RTAPP+APL  +Y  TLG
Sbjct: 247 LARDPSFCYGAPLAEALRTAPPAAPLAGLYYGTLG 281


>UniRef50_Q7UUT5 Cluster: Putative uncharacterized protein; n=1;
           Pirellula sp.|Rep: Putative uncharacterized protein -
           Rhodopirellula baltica
          Length = 135

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 25/73 (34%), Positives = 34/73 (46%)
 Frame = +2

Query: 191 PPYLRRCGKSSPSALACRSTXLRAPLRSFGLLVQPQPLRLALFPCSVTAGEDCSSLRASG 370
           PP  R C  +SPS    R+   R  LR+ G + +P P     F      G+D    R+ G
Sbjct: 15  PPTQRSCRFTSPSRWKGRTASARGGLRA-GSIAEPSPRFARPFQ---REGDDS---RSPG 67

Query: 371 FYIHSRGRADKTR 409
           F  HS+G  D +R
Sbjct: 68  FVRHSQGEGDGSR 80


>UniRef50_A0H7T3 Cluster: Putative uncharacterized protein
           precursor; n=1; Comamonas testosteroni KF-1|Rep:
           Putative uncharacterized protein precursor - Comamonas
           testosteroni KF-1
          Length = 128

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 19/66 (28%), Positives = 27/66 (40%)
 Frame = +2

Query: 212 GKSSPSALACRSTXLRAPLRSFGLLVQPQPLRLALFPCSVTAGEDCSSLRASGFYIHSRG 391
           G  S S  +C +       R+ GL  QP+P + A   CS  +G  C+  R   +     G
Sbjct: 62  GSVSGSKRSCSAEMGGGASRALGLTAQPKPSQAAWGDCSCRSGSICTGPRGGQYCYSDSG 121

Query: 392 RADKTR 409
           R    R
Sbjct: 122 RKSYVR 127


>UniRef50_A3HXH4 Cluster: Putative uncharacterized protein; n=1;
           Algoriphagus sp. PR1|Rep: Putative uncharacterized
           protein - Algoriphagus sp. PR1
          Length = 883

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +2

Query: 350 SSLRASGFYIHSRGRADKTRWKVGCS-DSLFHIFRIFMQFYYQNTSNFTIIEFLRGGV 520
           S +R + F+ + +    K  W+VG S D+LF IFR+      +  + F   EFLRGGV
Sbjct: 821 SGVRENLFFNYLKTENSKNYWEVGYSLDNLFRIFRL------EIGAGFEDREFLRGGV 872


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,972,445
Number of Sequences: 1657284
Number of extensions: 14009969
Number of successful extensions: 34060
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34053
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71734006925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)