Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0921
         (829 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111390-1|AAI11391.1|  384|Homo sapiens SRY (sex determining re...    36   0.18 
BC073971-1|AAH73971.1|  384|Homo sapiens SRY (sex determining re...    36   0.18 
BC038590-1|AAH38590.1|  384|Homo sapiens SRY (sex determining re...    36   0.18 
AL355803-1|CAC16611.1|  384|Homo sapiens SRY (sex determining re...    36   0.18 
AJ243896-1|CAB95835.1|  384|Homo sapiens SOX18 protein protein.        36   0.18 
AF270652-1|AAG48577.1|  384|Homo sapiens Sry-related HMG-box pro...    36   0.18 
AB033888-1|BAA94874.1|  384|Homo sapiens SOX18 protein.                36   0.18 
AK090473-1|BAC03454.1|  238|Homo sapiens FLJ00394 protein protein.     30   8.9  

>BC111390-1|AAI11391.1|  384|Homo sapiens SRY (sex determining
           region Y)-box 18 protein.
          Length = 384

 Score = 35.9 bits (79), Expect = 0.18
 Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +3

Query: 288 SSLSRSVSHCFRAPSQRA-RTAPPSAPLVFIY--TLGVGQTRPG 410
           + LSR    C+ AP   A RTAPP+APL  +Y  TLG     PG
Sbjct: 252 TELSRDPGGCYGAPLAEALRTAPPAAPLAGLYYGTLGTPGPYPG 295


>BC073971-1|AAH73971.1|  384|Homo sapiens SRY (sex determining
           region Y)-box 18 protein.
          Length = 384

 Score = 35.9 bits (79), Expect = 0.18
 Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +3

Query: 288 SSLSRSVSHCFRAPSQRA-RTAPPSAPLVFIY--TLGVGQTRPG 410
           + LSR    C+ AP   A RTAPP+APL  +Y  TLG     PG
Sbjct: 252 TELSRDPGGCYGAPLAEALRTAPPAAPLAGLYYGTLGTPGPYPG 295


>BC038590-1|AAH38590.1|  384|Homo sapiens SRY (sex determining
           region Y)-box 18 protein.
          Length = 384

 Score = 35.9 bits (79), Expect = 0.18
 Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +3

Query: 288 SSLSRSVSHCFRAPSQRA-RTAPPSAPLVFIY--TLGVGQTRPG 410
           + LSR    C+ AP   A RTAPP+APL  +Y  TLG     PG
Sbjct: 252 TELSRDPGGCYGAPLAEALRTAPPAAPLAGLYYGTLGTPGPYPG 295


>AL355803-1|CAC16611.1|  384|Homo sapiens SRY (sex determining
           region Y)-box 18 protein.
          Length = 384

 Score = 35.9 bits (79), Expect = 0.18
 Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +3

Query: 288 SSLSRSVSHCFRAPSQRA-RTAPPSAPLVFIY--TLGVGQTRPG 410
           + LSR    C+ AP   A RTAPP+APL  +Y  TLG     PG
Sbjct: 252 TELSRDPGGCYGAPLAEALRTAPPAAPLAGLYYGTLGTPGPYPG 295


>AJ243896-1|CAB95835.1|  384|Homo sapiens SOX18 protein protein.
          Length = 384

 Score = 35.9 bits (79), Expect = 0.18
 Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +3

Query: 288 SSLSRSVSHCFRAPSQRA-RTAPPSAPLVFIY--TLGVGQTRPG 410
           + LSR    C+ AP   A RTAPP+APL  +Y  TLG     PG
Sbjct: 252 TELSRDPGGCYGAPLAEALRTAPPAAPLAGLYYGTLGTPGPYPG 295


>AF270652-1|AAG48577.1|  384|Homo sapiens Sry-related HMG-box
           protein protein.
          Length = 384

 Score = 35.9 bits (79), Expect = 0.18
 Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +3

Query: 288 SSLSRSVSHCFRAPSQRA-RTAPPSAPLVFIY--TLGVGQTRPG 410
           + LSR    C+ AP   A RTAPP+APL  +Y  TLG     PG
Sbjct: 252 TELSRDPGGCYGAPLAEALRTAPPAAPLAGLYYGTLGTPGPYPG 295


>AB033888-1|BAA94874.1|  384|Homo sapiens SOX18 protein.
          Length = 384

 Score = 35.9 bits (79), Expect = 0.18
 Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +3

Query: 288 SSLSRSVSHCFRAPSQRA-RTAPPSAPLVFIY--TLGVGQTRPG 410
           + LSR    C+ AP   A RTAPP+APL  +Y  TLG     PG
Sbjct: 252 TELSRDPGGCYGAPLAEALRTAPPAAPLAGLYYGTLGTPGPYPG 295


>AK090473-1|BAC03454.1|  238|Homo sapiens FLJ00394 protein protein.
          Length = 238

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -1

Query: 427 RAPHFPPGLVCPTPRVYIKTRGAEGGAVLARCDG 326
           R P  PP L  P PR ++++ GA GG V  R  G
Sbjct: 198 RGPWAPPALTPPLPRHFLRS-GAAGGGVRVRPGG 230


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,200,341
Number of Sequences: 237096
Number of extensions: 2108031
Number of successful extensions: 4226
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4226
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)