Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0921
         (829 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64844-12|AAB18312.4|  417|Caenorhabditis elegans Hypothetical p...    31   1.0  
AL117206-8|CAB60449.2|  328|Caenorhabditis elegans Hypothetical ...    28   7.1  
AC024809-10|AAF59547.1|  272|Caenorhabditis elegans Hypothetical...    28   7.1  

>U64844-12|AAB18312.4|  417|Caenorhabditis elegans Hypothetical
           protein T22F3.10 protein.
          Length = 417

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = +3

Query: 3   GTYVLTPPRQKFY*KPIKAIFKFLYSSLIVCTQQLVIYLRTKLSFGFLIVS*FL 164
           GT + T P    Y K   A + FL + ++ C    ++ L  K+SF FLIV  FL
Sbjct: 37  GTIIGTIPINLLYVK-YGARYPFLIAGVVSCLATALVPLAAKISFFFLIVLRFL 89


>AL117206-8|CAB60449.2|  328|Caenorhabditis elegans Hypothetical
           protein Y67A10A.8 protein.
          Length = 328

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 416 VGCSDSLFHIFRIFMQFYYQNTSNFTIIEF 505
           VGCS   +HIF +    Y+Q + N  + E+
Sbjct: 266 VGCSHQWWHIFILGAMIYWQQSGNQLLTEY 295


>AC024809-10|AAF59547.1|  272|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.1 protein.
          Length = 272

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -1

Query: 523 TNATSQKFYYSKIARVLVIKLHKYSKNMEKRI 428
           T  TSQ+  Y ++ +  + KL+KY + + KR+
Sbjct: 38  TTPTSQEQLYEEVKKSFIPKLNKYRREVAKRL 69


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,672,965
Number of Sequences: 27780
Number of extensions: 328095
Number of successful extensions: 853
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)