Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0920
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   3.7  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   3.7  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   4.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.9  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   8.6  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +2

Query: 308 DPKACPPMDCDAGKDGIPMRRALPLK 385
           DP  C   DC   +DG  +   LP K
Sbjct: 164 DPAVCVLPDCFCSEDGTTIPGDLPSK 189


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 437 PSTPEDQHLLDA 472
           P +PED+ LLDA
Sbjct: 234 PKSPEDEELLDA 245


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 199 NNCSCTANKGHGGQWLPISIFA*LKQ 276
           +N  C A+ G G  +LP+++   +KQ
Sbjct: 43  DNRGCAASVGEGSFYLPMNMQGFVKQ 68


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 695 CKTCAERKVEAVYVLCVNXRC 633
           CK  A RKV  +  LC N  C
Sbjct: 141 CKDAALRKVVPLKKLCNNGTC 161


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -1

Query: 296 STSHIFACFNHAKMEIGNHWPP*PLLAVHEQLFENQKFNYVTKNL 162
           STS   A  N   +     + P PL    E+LFE  +  YVT++L
Sbjct: 216 STSKEIALNNDVLLFFVKVFRPEPLC---ERLFEASREEYVTRHL 257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,407
Number of Sequences: 336
Number of extensions: 4269
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)