Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0920
(797 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyce... 35 0.016
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 28 1.8
SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces pomb... 28 1.8
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 27 4.1
SPBC2D10.05 |exg3||glucan 1,3-beta-glucosidase Exg3|Schizosaccha... 26 5.4
SPAC186.07c |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 26 5.4
SPBC17D1.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 7.2
SPBC18H10.03 |tif35||translation initiation factor eIF3g|Schizos... 26 7.2
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 25 9.5
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 25 9.5
>SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 324
Score = 34.7 bits (76), Expect = 0.016
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2
Query: 629 QDNXYLHKGHRPPLPFVQRMFCINFPNPH*EQVXIWTHLLCCVALL 766
QDN Y+ G+RPP F + + + H E V IWTHL + L
Sbjct: 59 QDNQYIISGYRPP-SFSFYLCVKSIFHVHNESVNIWTHLFGAIVFL 103
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -1
Query: 776 IATPIMPRSKGDASKXLPVLSVDSEN---*CKTCAERKVE 666
+AT +P K K + +LS+DS N C TC E KV+
Sbjct: 19 VATDNIPIGKIIIRKRVDILSLDSANLTRTCSTCTEEKVK 58
>SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 990
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = -3
Query: 585 RLPYFANEFLGLFGGVMGQCSQINLMDNTPAFKTSAISASNRC*SSGVEGSGHPSSSSAK 406
R P A LG FGG + S L D K SA+ C + +E G PS + +
Sbjct: 891 RSPLIAKILLG-FGGNASRSSLPLLSDILGKLKAQNFSATRACLTQSLEEEGFPSRNVSN 949
Query: 405 D 403
+
Sbjct: 950 E 950
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 26.6 bits (56), Expect = 4.1
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = -3
Query: 429 HPSSSSAKDFVELVHLRGKALRIGIPSLPASQSIGGHALGSNIRFHFP 286
HP+++SA D E + + + IP+ P+S+S HA+ + +F FP
Sbjct: 59 HPTTASASDSDEATEIFTHSQPLPIPAGPSSKS---HAI--DFKFKFP 101
>SPBC2D10.05 |exg3||glucan 1,3-beta-glucosidase
Exg3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 464
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +1
Query: 223 KGHGGQWLPISIFA*LKQAKMWEVESDIGSQSVSSDGLRRRQGWDPDAESLASQMDELDE 402
+ H W+ I F+ +KQ + V +G S+ +D L + ++P AE + + L E
Sbjct: 62 EAHWKSWIGIEDFSYMKQHLVNSVRIPLGYWSLGNDELVKGTPFEPYAEVYRNSLHILCE 121
>SPAC186.07c |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 332
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 428 CPLPSTPEDQHLLDAEMAEVLKAGV 502
CPL TP+ +HL+D ++ +K GV
Sbjct: 206 CPL--TPDTEHLVDEKLLASMKKGV 228
>SPBC17D1.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 368
Score = 25.8 bits (54), Expect = 7.2
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = -3
Query: 504 NTPAFKTSAISASNRC*SSGVEGSGHPSSSSAKDFVELVHLRGKALRIGIPSLPASQSIG 325
N P F TSA+S + + V S PSS K + G L P+ PAS +G
Sbjct: 67 NNP-FSTSALSEAL---NGSVSMSHVPSSGLLKSTLSSTPTAGSNLLGTSPAEPASGLVG 122
Query: 324 GHALGSNI 301
GS++
Sbjct: 123 SSGFGSSM 130
>SPBC18H10.03 |tif35||translation initiation factor
eIF3g|Schizosaccharomyces pombe|chr 2|||Manual
Length = 282
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 345 PASQSIGGHALGSNIRFHFPHLRLFQSREDGN 250
P S G ALG R+ PHLR RE G+
Sbjct: 161 PVSSRASG-ALGEKGRYIAPHLRAGSGRESGD 191
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 370 SPHRDPILACVAIHRRT 320
SPH +PILA + RRT
Sbjct: 334 SPHEEPILASTSADRRT 350
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 313 QSVSSDGLRRRQGW-DPDAESL 375
Q + D +RR QGW PD E+L
Sbjct: 354 QQIKEDEIRRAQGWFFPDKEAL 375
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,402,232
Number of Sequences: 5004
Number of extensions: 71420
Number of successful extensions: 191
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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