Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0920
         (797 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   2.0  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   2.7  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    24   4.7  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   6.3  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +2

Query: 545 PNRPRNSFAKYGRRRGTCAISDICHV 622
           P+ PR S A+YG RRG    S I  V
Sbjct: 532 PDSPRLSDAQYGFRRGRSTFSAIQRV 557


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 545 PNRPRNSFAKYGRRRGTCAISDI 613
           P+ P+ S A+YG RRG   IS I
Sbjct: 537 PDSPQLSDAQYGFRRGRSTISAI 559


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -2

Query: 460 MLILRC*RQRTSFFFFCEGLRRARPFERQGSPHRDPI 350
           M++ R  R  T   FF   L  A+  ++Q  PHR P+
Sbjct: 492 MIVYR--RSLTLSLFFKAYLAIAQSLDKQSIPHRTPV 526


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 21/54 (38%), Positives = 29/54 (53%)
 Frame = +2

Query: 461 LLDAEMAEVLKAGVLSMRLIWEHWPITPPNRPRNSFAKYGRRRGTCAISDICHV 622
           +LDA + +VL+  +L+ RL   H  +  P  PR S  +YG RRG   I  I  V
Sbjct: 495 MLDA-LGKVLERLILN-RL---HEFLEDPESPRLSDRQYGFRRGCSTIGLIQRV 543


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 871,292
Number of Sequences: 2352
Number of extensions: 17916
Number of successful extensions: 50
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)