Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0920
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70848-1|AAB09107.2| 434|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AC006733-6|AAF60489.2| 581|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 3.9
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 29 3.9
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 29 3.9
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 29 3.9
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 29 3.9
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 5.1
AC024785-5|AAF60596.1| 577|Caenorhabditis elegans C-type lectin... 28 8.9
>U70848-1|AAB09107.2| 434|Caenorhabditis elegans Hypothetical
protein C43G2.1 protein.
Length = 434
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/45 (51%), Positives = 27/45 (60%)
Frame = +2
Query: 626 LQDNXYLHKGHRPPLPFVQRMFCINFPNPH*EQVXIWTHLLCCVA 760
LQDN +L GHRPPLP F + + H E IWTHL+ CVA
Sbjct: 170 LQDNEFLRHGHRPPLPSFSECF-KSIWSLHTETGNIWTHLIGCVA 213
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 565 VRKVWEASWNVCHFRHLPRW 624
V K +EA W V + HLP W
Sbjct: 150 VTKTYEARWKVLKYEHLPEW 169
>AC006733-6|AAF60489.2| 581|Caenorhabditis elegans Hypothetical
protein Y32H12A.5 protein.
Length = 581
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/45 (53%), Positives = 25/45 (55%)
Frame = +2
Query: 626 LQDNXYLHKGHRPPLPFVQRMFCINFPNPH*EQVXIWTHLLCCVA 760
LQDN YL GHRPPLP F F H E IWTH+ CVA
Sbjct: 280 LQDNEYLRTGHRPPLPSFSSCFKSIFA-LHTETGNIWTHMYGCVA 323
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 5/82 (6%)
Frame = +1
Query: 565 VRKVWEASWNVCHFRHLPRWA-----XXXXXXXXXXXXASTFRSAHVLHQFSESTLRTGX 729
+++ WEA W +F LP W +S F+S LH T
Sbjct: 260 IKRFWEARWKATNFETLPEWLQDNEYLRTGHRPPLPSFSSCFKSIFALH---TETGNIWT 316
Query: 730 HLDASPLLRGIIGVAIYFLSRP 795
H+ G+ I+FL+RP
Sbjct: 317 HMYGCV---AFFGIGIWFLTRP 335
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 386 WTSSTKSFAEEEEGCPLPSTPEDQHLLDAEMAEVLKAGV 502
W+S+++ + + +TPED +D ++AE L+AG+
Sbjct: 2607 WSSNSRELKNVGDEIKIDATPEDAQAVDTKLAE-LQAGI 2644
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 386 WTSSTKSFAEEEEGCPLPSTPEDQHLLDAEMAEVLKAGV 502
W+S+++ + + +TPED +D ++AE L+AG+
Sbjct: 2607 WSSNSRELKNVGDEIKIDATPEDAQAVDTKLAE-LQAGI 2644
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 386 WTSSTKSFAEEEEGCPLPSTPEDQHLLDAEMAEVLKAGV 502
W+S+++ + + +TPED +D ++AE L+AG+
Sbjct: 2607 WSSNSRELKNVGDEIKIDATPEDAQAVDTKLAE-LQAGI 2644
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 386 WTSSTKSFAEEEEGCPLPSTPEDQHLLDAEMAEVLKAGV 502
W+S+++ + + +TPED +D ++AE L+AG+
Sbjct: 2607 WSSNSRELKNVGDEIKIDATPEDAQAVDTKLAE-LQAGI 2644
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 386 WTSSTKSFAEEEEGCPLPSTPEDQHLLDAEMAEVLKAGV 502
W+S+++ + + +TPED +D ++AE L+AG+
Sbjct: 2607 WSSNSRELKNVGDEIKIDATPEDAQAVDTKLAE-LQAGI 2644
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 386 WTSSTKSFAEEEEGCPLPSTPEDQHLLDAEMAEVLKAGV 502
W+S+++ + + +TPED +D ++AE L+AG+
Sbjct: 2607 WSSNSRELKNVGDEIKIDATPEDAQAVDTKLAE-LQAGI 2644
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 386 WTSSTKSFAEEEEGCPLPSTPEDQHLLDAEMAEVLKAGV 502
W+S+++ + + +TPED +D ++AE L+AG+
Sbjct: 2607 WSSNSRELKNVGDEIKIDATPEDAQAVDTKLAE-LQAGI 2644
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 386 WTSSTKSFAEEEEGCPLPSTPEDQHLLDAEMAEVLKAGV 502
W+S+++ + + +TPED +D ++AE L+AG+
Sbjct: 2607 WSSNSRELKNVGDEIKIDATPEDAQAVDTKLAE-LQAGI 2644
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 308 DPKACPPMDCDAGKDGIP-MRRALPLKWTSSTKSFAEEEEGCPLPSTPED 454
D A PPMDC A D +P + + + + T T ++ PS P+D
Sbjct: 460 DSPASPPMDCPASPDMVPVIPQTVKIIPTVPTIPLETQDVDMREPSAPKD 509
>AC024785-5|AAF60596.1| 577|Caenorhabditis elegans C-type lectin
protein 73 protein.
Length = 577
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = -3
Query: 360 GIPSLPASQSIGGHALGSNI---RFHFPHLRLFQSREDGNWQP 241
GI SL ++ +G H +G+N+ +F R + E+ +W+P
Sbjct: 448 GINSLKEAEQLGNHVVGANLNNEQFWLGAQRRTECLENNDWKP 490
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,110,806
Number of Sequences: 27780
Number of extensions: 418211
Number of successful extensions: 1112
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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