Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0919
         (789 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    26   0.30 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.69 
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   2.8  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   2.8  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   4.9  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   4.9  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   4.9  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    22   4.9  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   4.9  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   6.4  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   8.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.5  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +3

Query: 531 RCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSP 626
           R  R VVPP   C  P+T+ P P     D++ P
Sbjct: 195 RSLRCVVPPTEDCDVPSTIPPPPPEEDDDSNIP 227


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 333 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 428
           +VT+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 205 GTRREEHHLLRNRP 164
           G R+  HHL++N+P
Sbjct: 82  GVRKVLHHLIKNKP 95


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
 Frame = +1

Query: 571 LRRRCLPHRAH-LRGIRTPPRHPASGLSRSRPHRLPHEDSHRARATSFTTTA 723
           L R C  +R   L G  +P       L + R H      SH  R T  TT A
Sbjct: 247 LARTCRDNRLLVLAGTSSPSNRFTRHLIQRRTHTRHTTTSHNTRGTPRTTPA 298


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 205 GTRREEHHLLRNRP 164
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 205 GTRREEHHLLRNRP 164
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 780 QSQERRAQLLLDVTNDFP 727
           Q++    ++LLDV N FP
Sbjct: 468 QNEAEEVKILLDVINHFP 485


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 16/74 (21%), Positives = 30/74 (40%)
 Frame = -1

Query: 768 RRAQLLLDVTNDFPLGGGSERSSPRSVRIFMR*SVRSRPAKSRRRMAWGSAYPS*MGTVW 589
           +R  +  D  N F     S R +P+S        V +   + +R  +   A+ S   ++ 
Sbjct: 65  KRKSISSDEENSFQGKHKSRRKAPQSFEDIQHQRVMANVRERQRTQSLNEAFASLRKSIP 124

Query: 588 ETPSPESSTIPVVR 547
             PS + S I  ++
Sbjct: 125 TMPSDKLSKIQTLK 138


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 302 PDPQIPHRTRNRH 340
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 96  KLVRCRCDKMKIKRPAVTANREKQIP 19
           K  R   D+ ++ RPA  ANR    P
Sbjct: 330 KRPRPNIDRHEVTRPAAPANRGNGFP 355


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +1

Query: 592 HRAHLRGIRTPPRHPASGLSRSRP 663
           H+A +R +  PP+       RS P
Sbjct: 62  HKAPIRPVALPPKREIPSPKRSSP 85


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 371 MPNLLHVIPVSDDSVFD 321
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 371 MPNLLHVIPVSDDSVFD 321
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 371 MPNLLHVIPVSDDSVFD 321
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 371 MPNLLHVIPVSDDSVFD 321
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,217
Number of Sequences: 336
Number of extensions: 4975
Number of successful extensions: 22
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)