Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0918
(676 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36640.1 68415.m04494 late embryogenesis abundant protein (EC... 47 1e-05
At2g36070.1 68415.m04429 mitochondrial import inner membrane tra... 36 0.025
At4g34430.4 68417.m04893 DNA-binding family protein contains Pfa... 33 0.13
At4g34430.3 68417.m04892 DNA-binding family protein contains Pfa... 33 0.13
At4g34430.2 68417.m04891 DNA-binding family protein contains Pfa... 33 0.13
At4g34430.1 68417.m04890 DNA-binding family protein contains Pfa... 33 0.13
At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar ... 33 0.13
At2g26570.1 68415.m03187 expressed protein contains Pfam profile... 33 0.17
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 32 0.30
At5g20440.1 68418.m02430 mob1/phocein family protein contains Pf... 32 0.40
At3g15670.1 68416.m01986 late embryogenesis abundant protein, pu... 32 0.40
At2g20510.1 68415.m02395 mitochondrial import inner membrane tra... 32 0.40
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 31 0.70
At5g18620.2 68418.m02206 DNA-dependent ATPase, putative similar ... 31 0.93
At5g18620.1 68418.m02205 DNA-dependent ATPase, putative similar ... 31 0.93
At2g19950.1 68415.m02332 expressed protein contains 2 transmembr... 31 0.93
At5g45720.1 68418.m05621 hypothetical protein 30 1.2
At5g39420.1 68418.m04775 protein kinase family protein contains ... 30 1.2
At4g27630.2 68417.m03972 expressed protein 30 1.2
At4g27630.1 68417.m03971 expressed protein 30 1.2
At3g58840.1 68416.m06558 expressed protein 30 1.2
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 30 1.2
At1g72100.1 68414.m08334 late embryogenesis abundant domain-cont... 30 1.2
At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxida... 30 1.2
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 30 1.6
At3g50370.1 68416.m05508 expressed protein 29 2.1
At3g09980.1 68416.m01198 expressed protein contains Pfam profile... 29 2.1
At1g64990.1 68414.m07366 expressed protein contains similarity t... 29 2.1
At4g32160.1 68417.m04574 phox (PX) domain-containing protein con... 29 2.8
At4g27595.1 68417.m03964 protein transport protein-related low s... 29 2.8
At3g09550.1 68416.m01134 ankyrin repeat family protein contains ... 29 2.8
At2g48160.1 68415.m06031 PWWP domain-containing protein 29 2.8
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 29 2.8
At2g27170.1 68415.m06029 structural maintenance of chromosomes (... 29 2.8
At1g70920.1 68414.m08183 homeobox-leucine zipper protein, putati... 29 2.8
At1g07630.1 68414.m00818 protein phosphatase 2C family protein /... 29 3.8
At1g06530.1 68414.m00692 myosin heavy chain-related similar to m... 29 3.8
At5g52410.2 68418.m06502 expressed protein 28 5.0
At5g52410.1 68418.m06503 expressed protein 28 5.0
At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C... 28 5.0
At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C... 28 5.0
At1g54560.1 68414.m06222 myosin, putative similar to myosin GI:4... 28 5.0
At1g45545.1 68414.m05199 hypothetical protein contains Pfam prof... 28 5.0
At5g61920.1 68418.m07773 hypothetical protein 28 6.6
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 28 6.6
At2g36410.2 68415.m04470 expressed protein contains Pfam profile... 28 6.6
At2g36410.1 68415.m04469 expressed protein contains Pfam profile... 28 6.6
At2g28620.1 68415.m03479 kinesin motor protein-related 28 6.6
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 28 6.6
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 28 6.6
At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family pr... 28 6.6
At3g59080.1 68416.m06586 aspartyl protease family protein contai... 27 8.7
At3g50100.1 68416.m05477 exonuclease family protein contains exo... 27 8.7
At2g39300.1 68415.m04825 expressed protein ; expression supporte... 27 8.7
>At2g36640.1 68415.m04494 late embryogenesis abundant protein
(ECP63) / LEA protein nearly identical to to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 448
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Frame = +3
Query: 138 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKGRLR-SVLQQLNAFAKSLQGALGDA 314
K IE K KT E + ++ K+ + +D + + G L+ S ++ L G +A
Sbjct: 226 KAIEAKDKTAEKTGEYKDYTVEKATEGKDVTVSKLGELKDSAVETAKRAMGFLSGKTEEA 285
Query: 315 NGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSS 494
GKA E + +++N+E+ E R+ ++ L+E+ A Q Q++++ + +
Sbjct: 286 KGKAVETKDTAKENMEKAGEVTRQKMEEMRLEGKELKEEAGAKAQEASQKTRESTESGAQ 345
Query: 495 NVQET 509
+ET
Sbjct: 346 KAEET 350
>At2g36070.1 68415.m04429 mitochondrial import inner membrane
translocase subunit TIM44, putative contains similarity
to Swiss-Prot:O35857 import inner membrane translocase
subunit TIM44, mitochondrial precursor [Mus musculus];
contains Pfam domian PF04280: Mitochondrial import inner
membrane, translocase subunit TIM44
Length = 469
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/76 (28%), Positives = 43/76 (56%)
Frame = +3
Query: 279 FAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTV 458
F+K ++G D+N + ++ +++ ++ AEEL+ D++ EKL Q
Sbjct: 51 FSKKIRGE-ADSNPEFQKTVKEFKER----AEELQGVKEDLKVRTKQTTEKLYKQGQGVW 105
Query: 459 QESQKLAKKVSSNVQE 506
E++ +AKKVSS+V++
Sbjct: 106 TEAESVAKKVSSSVKD 121
>At4g34430.4 68417.m04893 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 986
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 285 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 458
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765
Query: 459 QESQKLAKKVSSN 497
E +LAK+ +N
Sbjct: 766 GEKVQLAKEEGAN 778
>At4g34430.3 68417.m04892 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 983
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 285 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 458
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 704 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 763
Query: 459 QESQKLAKKVSSN 497
E +LAK+ +N
Sbjct: 764 GEKVQLAKEEGAN 776
>At4g34430.2 68417.m04891 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 285 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 458
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765
Query: 459 QESQKLAKKVSSN 497
E +LAK+ +N
Sbjct: 766 GEKVQLAKEEGAN 778
>At4g34430.1 68417.m04890 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 285 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 458
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765
Query: 459 QESQKLAKKVSSN 497
E +LAK+ +N
Sbjct: 766 GEKVQLAKEEGAN 778
>At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1055
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +3
Query: 159 KEFHKTLEQQFNSLTKSKDAQ---DFSKAWKGRLRSVLQQLNAFAKSLQGALGDANGKAK 329
KE K +Q+ + +S++A D + KGRL+ +LQQ FA A D + K
Sbjct: 85 KEMQKLKKQKIQEMLESQNASIDADMNNKGKGRLKYLLQQTELFA---HFAKSDGSSSQK 141
Query: 330 EALEQSRQNIERTAEE 377
+A + R + T EE
Sbjct: 142 KAKGRGRHASKITEEE 157
>At2g26570.1 68415.m03187 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
weak similarity to merozoite surface protein 3 alpha
(GI:27596802) [Plasmodium vivax]
Length = 807
Score = 33.1 bits (72), Expect = 0.17
Identities = 27/107 (25%), Positives = 47/107 (43%)
Frame = +3
Query: 162 EFHKTLEQQFNSLTKSKDAQDFSKAWKGRLRSVLQQLNAFAKSLQGALGDANGKAKEALE 341
E +T + + +K KDA++ +L+ ++ + AKSL + KAKE E
Sbjct: 524 EIDRTRSEIASVQSKEKDAREKMVELPKQLQQAAEEADE-AKSLAEVAREELRKAKEEAE 582
Query: 342 QSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAK 482
Q++ L A ++E A E+L A ++ES+ K
Sbjct: 583 QAKAGASTMESRLFAAQKEIE--AAKASERLALAAIKALEESESTLK 627
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 32.3 bits (70), Expect = 0.30
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +3
Query: 330 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ--ES-QKLAKKVSSNV 500
EAL+ S Q + AE LRKA + E + L +L+ A + Q ES Q+L +K+S++
Sbjct: 997 EALKASLQAERQAAENLRKAFSEAEARNSELATELENATRKADQLHESVQRLEEKLSNSE 1056
Query: 501 QE 506
E
Sbjct: 1057 SE 1058
>At5g20440.1 68418.m02430 mob1/phocein family protein contains Pfam
profile: PF03637 mob1/phocein family
Length = 217
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +3
Query: 345 SRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETMRNW 521
S N+ RT ++ HP+ + + +RE + + ++E+ +L + V N M N+
Sbjct: 9 SSNNVVRTVPSKKRKHPEYKSKGSQIRELISGIRSDNLREAVRLPQGVDINEWFAMNNF 67
>At3g15670.1 68416.m01986 late embryogenesis abundant protein,
putative / LEA protein, putative similar to SP|P13934
Late embryogenesis abundant protein 76 (LEA 76)
{Brassica napus}; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 225
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +3
Query: 294 QGALGDANGKAKEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQ 470
Q G A G ++ E+ R +TA+ + KAH + + QAA Q + +Q
Sbjct: 18 QEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQTAQAAQQKAHETAQ 77
Query: 471 KLAKKVSSNVQ 503
+K S Q
Sbjct: 78 SAKEKTSQTAQ 88
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Frame = +3
Query: 306 GDANGKAKEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQKLAK 482
G+ GKA+E Q+ + AEE R K + E Q+A T Q +Q +
Sbjct: 11 GETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQTAQAAQQ 70
Query: 483 KVSSNVQ 503
K Q
Sbjct: 71 KAHETAQ 77
>At2g20510.1 68415.m02395 mitochondrial import inner membrane
translocase subunit TIM44, putative contains similarity
to Swiss-Prot:O35857 import inner membrane translocase
subunit TIM44, mitochondrial precursor [Mus musculus];
contains Pfam domian PF04280: Mitochondrial import inner
membrane, translocase subunit TIM44
Length = 472
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/83 (21%), Positives = 40/83 (48%)
Frame = +3
Query: 264 QQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAA 443
++ + F + + G+A+ + E++ + ++ EE + D++ EKL
Sbjct: 43 RRFSVFTEFSKNIRGEAHSNPE--FERTVKELKERTEEFKGVTEDLKVRTKQTTEKLYKQ 100
Query: 444 VQNTVQESQKLAKKVSSNVQETM 512
E++ AKKVSS+V++ +
Sbjct: 101 ADGVWTEAESAAKKVSSSVKDKL 123
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +3
Query: 339 EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQN---TVQESQKLAKKVSSNVQET 509
E+ + + R AEE + +++ A R KL+ V N TV + +KLAKK+S +E
Sbjct: 557 EEEIEEMIREAEEFAEEDKIMKEKIDA-RNKLETYVYNMKSTVADKEKLAKKISDEDKEK 615
Query: 510 M 512
M
Sbjct: 616 M 616
>At5g18620.2 68418.m02206 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1072
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +3
Query: 159 KEFHKTLEQQFNSLTKSKDAQ---DFSKAWKGRLRSVLQQLNAFAKSLQGALGDANGKAK 329
KE K +Q+ + S++A D + KGR++ +LQQ FA A D + K
Sbjct: 90 KEMQKMKKQKIQQILDSQNASIDADMNNKGKGRIKYLLQQTELFA---HFAKSDPSPSQK 146
Query: 330 EALEQSRQNIERTAEE 377
+ + R + + T EE
Sbjct: 147 KGKGRGRHSSKLTEEE 162
>At5g18620.1 68418.m02205 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1069
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +3
Query: 159 KEFHKTLEQQFNSLTKSKDAQ---DFSKAWKGRLRSVLQQLNAFAKSLQGALGDANGKAK 329
KE K +Q+ + S++A D + KGR++ +LQQ FA A D + K
Sbjct: 90 KEMQKMKKQKIQQILDSQNASIDADMNNKGKGRIKYLLQQTELFA---HFAKSDPSPSQK 146
Query: 330 EALEQSRQNIERTAEE 377
+ + R + + T EE
Sbjct: 147 KGKGRGRHSSKLTEEE 162
>At2g19950.1 68415.m02332 expressed protein contains 2 transmembrane
domains; weak similarity to HPSR2 - heavy chain
potential motor protein (GI:871048) [Giardia
intestinalis]
Length = 702
Score = 30.7 bits (66), Expect = 0.93
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +3
Query: 138 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKG-RLRSVLQQLNAFAKSLQGALGDA 314
K E + K L + +TK + + + A K + +++ ++A Q AL +
Sbjct: 318 KSYEASIRHLQKDLSAAKSEVTKVESSMVEALAAKNSEIETLVSAMDALKN--QAALNEG 375
Query: 315 NGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 431
+ +AL + ER AEE R AH + K A RE+
Sbjct: 376 KLSSLQALREELATTERRAEEERSAH-NATKMAAMERER 413
>At5g45720.1 68418.m05621 hypothetical protein
Length = 900
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1
Query: 292 RLLAKALSCCSTDRSRPFQALLKSCASFD 206
R+ A+AL+C ST++S+P + SC S+D
Sbjct: 395 RVFARALNCHSTEQSKPC-GVCSSCVSYD 422
>At5g39420.1 68418.m04775 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 644
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/94 (24%), Positives = 46/94 (48%)
Frame = +3
Query: 129 DFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKGRLRSVLQQLNAFAKSLQGALG 308
D +++ H + + + ++ SL S DFS+ + + L+ L +S+ G L
Sbjct: 555 DVIEEVPSHESKLSR-IGERHGSLDGS--GLDFSQREEDSPKKTLEHLQFGKQSISGPLI 611
Query: 309 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKN 410
+GK E L+++ NI + +RK+H E++
Sbjct: 612 FKSGKIDEILQRNESNIR---QAVRKSHLQREQD 642
>At4g27630.2 68417.m03972 expressed protein
Length = 467
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 159 KEFHKTLEQQFNSLTKSKDAQDFSKAWKGRLRSVL 263
+E K L + L ++KDA FS+ WKG +++ L
Sbjct: 263 EELSKQLFLEIYELRQAKDAAAFSRTWKGHVQNFL 297
>At4g27630.1 68417.m03971 expressed protein
Length = 348
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 159 KEFHKTLEQQFNSLTKSKDAQDFSKAWKGRLRSVL 263
+E K L + L ++KDA FS+ WKG +++ L
Sbjct: 144 EELSKQLFLEIYELRQAKDAAAFSRTWKGHVQNFL 178
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 30.3 bits (65), Expect = 1.2
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 6/132 (4%)
Frame = +3
Query: 138 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKGRLRSVLQQLNA-FAKSLQGALGDA 314
KD+E + +E++ + K A + L + + L+ SL G A
Sbjct: 61 KDVEAEMNQRFGEMEKEIEEYEEEKKALEAISTRAVELETEVSNLHDDLITSLNGVDKTA 120
Query: 315 NGKA--KEALEQSRQNIE---RTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 479
A K+AL + + +E + AE LRK +VEK L K+ V+E ++ +
Sbjct: 121 EEVAELKKALAEIVEKLEGCEKEAEGLRKDRAEVEKRVRDLERKIGVL---EVREMEEKS 177
Query: 480 KKVSSNVQETMR 515
KK+ S +E MR
Sbjct: 178 KKLRS--EEEMR 187
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 30.3 bits (65), Expect = 1.2
Identities = 30/116 (25%), Positives = 60/116 (51%)
Frame = +3
Query: 168 HKTLEQQFNSLTKSKDAQDFSKAWKGRLRSVLQQLNAFAKSLQGALGDANGKAKEALEQS 347
++ L+Q+F+ + K Q S++ L QL + L+G +G + + + AL++
Sbjct: 313 NEKLKQEFDQ-AQEKSLQSSSES--ELLAETNNQLKIKIQELEGLIGSGSVEKETALKRL 369
Query: 348 RQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETMR 515
+ IER ++ E ++ L EKL+ +N ++E +KLA + +S V +T +
Sbjct: 370 EEAIERFNQK--------ETESSDLVEKLKTH-ENQIEEYKKLAHE-ASGVADTRK 415
>At1g72100.1 68414.m08334 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to embryogenic gene [Betula
pendula] GI:4539485; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 480
Score = 30.3 bits (65), Expect = 1.2
Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 1/129 (0%)
Frame = +3
Query: 123 APDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKGRLRSVLQQLNAFAKSLQGA 302
A D + + H ++ T+ Q K + + +G + A A
Sbjct: 168 AHDVKETVTHAARDVEDTVADQAQ-YAKGRVTEKAHDPKEGVAHKAHDAKESVADKAHDA 226
Query: 303 LGDANGKAKEALEQSRQNIERTAEEL-RKAHPDVEKNATALREKLQAAVQNTVQESQKLA 479
KA +A E+ R+ E + +KAH E+ +REK Q + +S+
Sbjct: 227 KESVAQKAHDAKEKVREKAHDVKETVAQKAHESKERAKDRVREKAQELKETATHKSKNAW 286
Query: 480 KKVSSNVQE 506
++V + +E
Sbjct: 287 ERVKNGARE 295
>At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxidase,
putative / ACC oxidase, putative nearly identical to ACC
oxidase (ACC ox1) GI:587086 from [Brassica oleracea]
Length = 320
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +3
Query: 129 DFFKDIEHHTKEFHKTL-EQQFNSLTKSKDAQDFSKAWKGRLRSVLQQLNAFAKSLQGAL 305
D IE TK+ +KT EQ+FN + KSK + + + +S +
Sbjct: 47 DLMDKIEKMTKDHYKTCQEQKFNDMLKSKGLDNLETEVEDVDWESTFYVRHLPQSNLNDI 106
Query: 306 GDANGKAKEALEQSRQNIERTAEEL 380
D + + + A++ + +E AE+L
Sbjct: 107 SDVSDEYRTAMKDFGKRLENLAEDL 131
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding protein,
C-terminal domain
Length = 1060
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 351 QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAK 482
+++E+ +E RKAH + A AL +LQAA + Q+LA+
Sbjct: 876 KSLEKLLDEERKAHIAANRRAEALSLELQAAQAHVDNLQQELAQ 919
>At3g50370.1 68416.m05508 expressed protein
Length = 2179
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +3
Query: 339 EQSRQNIERTAEELRKAHPDVEKNATALRE--KLQAAVQNTVQESQKLAKK 485
EQ R R AEELRK+ + EK+ + E + QAA Q ++ +K++++
Sbjct: 531 EQERLEATRRAEELRKSKEE-EKHRLFMEEERRKQAAKQKLLELEEKISRR 580
>At3g09980.1 68416.m01198 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 178
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +3
Query: 291 LQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQ 470
L G++ ++ +KE E SR + R ++EK +RE++QA + +E++
Sbjct: 28 LSGSMSFSSQMSKEDEEMSRTALSA----FRAKEEEIEKKKMEIRERVQAQLGRVEEETK 83
Query: 471 KLA 479
+LA
Sbjct: 84 RLA 86
>At1g64990.1 68414.m07366 expressed protein contains similarity to
putative G-protein coupled receptor GI:6649579 from
[Homo sapiens]
Length = 468
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 159 KEFHKTLEQQFNSLTKSKDAQDFSKAWKGRLRSVL 263
+E K L + L ++KDA +S+ WKG ++++L
Sbjct: 264 EELSKQLFLEVYELRQAKDAAAYSRTWKGHVQNLL 298
>At4g32160.1 68417.m04574 phox (PX) domain-containing protein
contains Pfam profile PF00787: PX domain
Length = 723
Score = 29.1 bits (62), Expect = 2.8
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Frame = +3
Query: 255 SVLQQLNAFAKSLQGALGDANGKAKEALEQS------RQN-IERTAEELRKAHPDVEKNA 413
+V LN L+G L ++KE LEQ+ R N ++ EELR+ ++E
Sbjct: 423 AVKDYLNKKVNDLEGELETTKQRSKENLEQAIMSERERFNQMQWDMEELRQKSYEMEMKL 482
Query: 414 TALRE---KLQAAVQNTVQESQKLAKKVSSNVQE 506
+ + + VQ+T+ E L+K++ + Q+
Sbjct: 483 KSREDGSSHAEPTVQSTISEKHVLSKELDARKQQ 516
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 309 DANGKAKEAL---EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 479
D K KE+L E QNI + AEELR D K E+L AA ++ V++ KL
Sbjct: 647 DQLSKVKESLVDKETKLQNIIQEAEELRVKEIDYLKKI----EELSAAKESLVEKETKLL 702
Query: 480 KKV 488
V
Sbjct: 703 STV 705
>At3g09550.1 68416.m01134 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 436
Score = 29.1 bits (62), Expect = 2.8
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +3
Query: 168 HKTLEQQFNSLTKSKDAQDFSKAWK--GRLRSVLQQLNAFAKSLQGALGDANGKAKEALE 341
HKT LT S++ + + G L++ +LN L+ + + LE
Sbjct: 177 HKTAYDIAEGLTHSEETAEIKEILSRCGALKA--NELNQPRDELRKTVTEIKKDVHTQLE 234
Query: 342 QSRQ---NIERTAEELRKAHPDVEKNAT 416
Q+R+ N++ A+ELRK H NAT
Sbjct: 235 QTRKTNKNVDGIAKELRKLHRAGINNAT 262
>At2g48160.1 68415.m06031 PWWP domain-containing protein
Length = 1366
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 11 PVRISSALSLSTAHH-GRQVR--SSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP 169
P+R++ LS ST H+ G + S ++L S P++DG+ + R H PH P
Sbjct: 1184 PLRMNPPLSGSTMHYQGPESSYISGVQLTNSIPQADGSNFQHRPYPSHPHPHPPPP 1239
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 187 SLTRSPSQRTHRTSARLGKDGSDPCCNSSTPSPRVSRERSETRTARPRR 333
S +RSP +R R + + P +PSP R RS + AR RR
Sbjct: 283 SRSRSPIRRHRRPTHEGRRQSPAPSRRRRSPSPPARRRRSPSPPARRRR 331
>At2g27170.1 68415.m06029 structural maintenance of chromosomes
(SMC) family protein similar to basement
membrane-associated chondroitin proteoglycan Bamacan
[Rattus norvegicus] GI:1785540; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain. No suitalble
start codon was identified.
Length = 1207
Score = 29.1 bits (62), Expect = 2.8
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +3
Query: 264 QQLNAFAKSLQGALGDAN-GKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQA 440
QQL+ KSL+ + D A+E LEQ + +EE K + VEK A + L
Sbjct: 214 QQLDKQRKSLEYTIYDKELHDAREKLEQVEVARTKASEESTKMYDRVEK-AQDDSKSLDE 272
Query: 441 AVQNTVQESQKLAK-KVSSNVQET 509
+++ +E Q L K K + Q+T
Sbjct: 273 SLKELTKELQTLYKEKETVEAQQT 296
>At1g70920.1 68414.m08183 homeobox-leucine zipper protein, putative
/ HD-ZIP transcription factor, putative similar to
homeodomain leucine zipper protein GI:5006851 from
[Oryza sativa]
Length = 206
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 562 HPGGDQEDPGGRQRQAVSVDIELSHLINISFI 657
H D + GGR+R+ + + E SHL+ SFI
Sbjct: 55 HVNEDDSNSGGRRRKKLRLTKEQSHLLEESFI 86
>At1g07630.1 68414.m00818 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2c
(GI:3608412) [Mesembryanthemum crystallinum]; contains
Pfam PF00481 : Protein phosphatase 2C domain
Length = 662
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Frame = +3
Query: 237 WKGRLRSVLQQLN--AFAKSLQGALGDA-----NGKAKEALEQSRQNIERTAEELRKAHP 395
W ++R L+++N L+G GD N A + NIE E +R HP
Sbjct: 449 WLAKIRQDLERINEETMMNDLEGCEGDQSSLVPNLSAFQLTVDHSTNIEEEVERIRNEHP 508
Query: 396 D 398
D
Sbjct: 509 D 509
>At1g06530.1 68414.m00692 myosin heavy chain-related similar to
myosin heavy chain (GI:1408194) {Placopecten
magellanicus}; similar to Myosin heavy chain, clone 203
(Fragment) (SP:P39922){Hydra attenuata}; contains one
transmembrane domain
Length = 323
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/84 (25%), Positives = 43/84 (51%)
Frame = +3
Query: 249 LRSVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALRE 428
LR+V ++ K L+ LG + KE E++++ R EE+R+ + EK L+E
Sbjct: 156 LRTVKEENEKRMKELESKLGAL--EVKELDEKNKKF--RAEEEMREKIDNKEKEVHDLKE 211
Query: 429 KLQAAVQNTVQESQKLAKKVSSNV 500
K+++ + + +L K ++ +
Sbjct: 212 KIKSLESDVAKGKTELQKWITEKM 235
>At5g52410.2 68418.m06502 expressed protein
Length = 761
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/85 (25%), Positives = 39/85 (45%)
Frame = +3
Query: 261 LQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQA 440
+++L AKS L + ALE+ R +IE E L + ++E+ +L +A
Sbjct: 497 VEKLAEEAKSELARLRVEKEEETLALERERTSIETEMEALARIRNELEEQLQSLASN-KA 555
Query: 441 AVQNTVQESQKLAKKVSSNVQETMR 515
+ + +L K+V QE +R
Sbjct: 556 EMSYEKERFDRLQKQVEDENQEILR 580
>At5g52410.1 68418.m06503 expressed protein
Length = 510
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/85 (25%), Positives = 39/85 (45%)
Frame = +3
Query: 261 LQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQA 440
+++L AKS L + ALE+ R +IE E L + ++E+ +L +A
Sbjct: 246 VEKLAEEAKSELARLRVEKEEETLALERERTSIETEMEALARIRNELEEQLQSLASN-KA 304
Query: 441 AVQNTVQESQKLAKKVSSNVQETMR 515
+ + +L K+V QE +R
Sbjct: 305 EMSYEKERFDRLQKQVEDENQEILR 329
>At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +3
Query: 321 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKL 476
KA + + +IE EELR HPD + N L+ K+ V+ +Q S+ +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSI 237
>At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +3
Query: 321 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKL 476
KA + + +IE EELR HPD + N L+ K+ V+ +Q S+ +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSI 237
>At1g54560.1 68414.m06222 myosin, putative similar to myosin GI:433663
from [Arabidopsis thaliana]
Length = 1529
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +3
Query: 237 WKGRL-RSVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNA 413
W+G+L R L+QL ++ GAL +A K+ LE+ + + A+ +++ D+E+
Sbjct: 868 WRGKLARRELRQLKMASRET-GALKEA----KDMLEKKVEELTYRAQLEKRSRVDLEEEK 922
Query: 414 TALREKLQAAVQ 449
+KLQ++++
Sbjct: 923 NQEIKKLQSSLE 934
>At1g45545.1 68414.m05199 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 752
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +3
Query: 282 AKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ 461
AKSL A + KAKE ++++ + +L ++ ++E A+ EKL A +Q
Sbjct: 512 AKSLAIAAREELRKAKEESDEAKTGLSAVERQLMESKKEME--ASRASEKLALAAIKALQ 569
Query: 462 ESQ 470
E++
Sbjct: 570 ETE 572
>At5g61920.1 68418.m07773 hypothetical protein
Length = 238
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +3
Query: 330 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ--AAVQNTVQESQKLAKKVSSNVQ 503
E+LE S Q +ER EE ++ + E+ + EKL ++ + + K +K+ S +
Sbjct: 170 ESLEASSQELERLKEEHQRLRKEFEEEKSGNVEKLAQLKGMERKIIGAVKAIEKLRSEI- 228
Query: 504 ETMRN 518
T RN
Sbjct: 229 STARN 233
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 387 PCGAPRPCARCSASTVPKPPWPCRSRLRALPGDSW 283
P PRPC+R + P + RALPG W
Sbjct: 61 PPPLPRPCSRPPKTKCSLKPLHWVKKTRALPGSLW 95
>At2g36410.2 68415.m04470 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 192
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 318 GKAKEALEQSRQNIERTAEEL---RKAHPDVEKNATALREKLQAAVQNTVQESQKLA 479
G + SR++ E T L R ++EK +RE++QA + QE+++L+
Sbjct: 45 GSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLS 101
>At2g36410.1 68415.m04469 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 195
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 318 GKAKEALEQSRQNIERTAEEL---RKAHPDVEKNATALREKLQAAVQNTVQESQKLA 479
G + SR++ E T L R ++EK +RE++QA + QE+++L+
Sbjct: 45 GSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLS 101
>At2g28620.1 68415.m03479 kinesin motor protein-related
Length = 1076
Score = 27.9 bits (59), Expect = 6.6
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Frame = +3
Query: 129 DFFKDIEHHTKEFHKTLEQQFNSLTK-SKDAQDFSKAWKGRLRSVLQQLNAFAKSLQGAL 305
D K + +F KTL+ N LTK ++DAQ+ ++ Q+L+AF K + ++
Sbjct: 713 DSAKSVSTVMLDFFKTLDTHANKLTKLAEDAQNVNE----------QKLSAFTKKFEESI 762
Query: 306 GDANGKAKEAL-EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAK 482
+ + E + E + R E ++ A D+ + +++ LQ + + +Q+S K
Sbjct: 763 ANEEKQMLEKVAELLASSNARKKELVQIAVQDIRQGSSSQTGALQQEM-SAMQDSASSIK 821
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094)
[Homo sapiens]
Length = 927
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Frame = +3
Query: 270 LNAFAKSLQGALGDANGKAKEALEQ---SRQNIERTAEELRKAHPDVEK----NATALRE 428
L A L+ + + K K+ L++ + I++ E + + D+E+ N++A+ E
Sbjct: 725 LEGRANQLEVEIRELRRKHKQELQEVLLHNELIQKDLEREKASRLDLERTARINSSAVSE 784
Query: 429 KLQAAVQNTVQESQKLAKKVS 491
+L A QN+ E+ K ++K S
Sbjct: 785 QLPIARQNSAFENDKFSEKRS 805
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/93 (21%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +3
Query: 237 WKGRL-RSVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNA 413
W+ ++ R L+ L AK GAL DA K + +E+ N+E +++R + +
Sbjct: 864 WRVKVARRELRNLKMAAKET-GALQDAKTKLENQVEELTSNLE-LEKQMRMEIEEAKSQE 921
Query: 414 TALREKLQAAVQNTVQESQKLAKKVSSNVQETM 512
+ + ++ ++++Q+ K S++Q +
Sbjct: 922 IEALQSVLTDIKLQLRDTQETKSKEISDLQSVL 954
>At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family
protein / kinesin motor family protein similar to
kinesin-like protein GB:CAB41097 GI:5541717 from
[Arabidopsis thaliana]; contains Pfam profiles PF00225:
Kinesin motor domain, PF00514:
Armadillo/beta-catenin-like repeat
Length = 894
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 276 AFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNT 455
+ +K L+ L + + L+ ++ER + + +VEKN EK + Q
Sbjct: 416 SLSKKLEVQLDKVIAENERQLKAFDDDVERINRQAQNRISEVEKNFAEALEKEKLKCQME 475
Query: 456 VQES-QKLAKKVSSN 497
ES +KL +K+ SN
Sbjct: 476 YMESVKKLEEKLISN 490
>At3g59080.1 68416.m06586 aspartyl protease family protein contains
similarity to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) [Nicotiana tabacum]; contains Pfam
profile PF00026: Eukaryotic aspartyl protease
Length = 535
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 360 RCSASTVPKPPWPCRSRLRALPGDSW 283
RC+ + P PP PC+S ++ P W
Sbjct: 229 RCNLVSSPDPPMPCKSDNQSCPYYYW 254
>At3g50100.1 68416.m05477 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 406
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 264 QQLNAFAKSLQGA-LGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 431
Q L+ K LQ L NG KE L +N + ++ R++H D+ + T ++K
Sbjct: 11 QVLDELVKLLQSRDLRGENGNWKEFLHVYDKNADSPSDPSRRSHEDLVQFLTTFKKK 67
>At2g39300.1 68415.m04825 expressed protein ; expression supported
by MPSS
Length = 768
Score = 27.5 bits (58), Expect = 8.7
Identities = 32/148 (21%), Positives = 62/148 (41%), Gaps = 13/148 (8%)
Frame = +3
Query: 111 VRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFS-KAWKGRLRSVLQQLNAFAK 287
V+ D K +E E LE + + + ++ S K + RLR +++L
Sbjct: 330 VKNDWDLLLKRLEKEKTELQVQLETELDRRSSEWTSKVESFKVEEKRLRERVRELAEHNV 389
Query: 288 SLQGALGDANGKAKEALEQSRQ------NIERTAEELRKAHPDVEKNATALREKLQAA-- 443
SLQ + + K E ++ R + TAEE+R+ + + +N + L+E +
Sbjct: 390 SLQREISTFHEKETERIDMIRHLDETVTELSATAEEMREENLFLMQNLSKLQESYTGSTD 449
Query: 444 ----VQNTVQESQKLAKKVSSNVQETMR 515
V+ +E K++ +V +R
Sbjct: 450 DLDYVRRNFEEKDMECKELHKSVTRLLR 477
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,305,592
Number of Sequences: 28952
Number of extensions: 198307
Number of successful extensions: 1083
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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