Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0917
         (827 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    25   0.73 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     25   0.97 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   5.2  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   6.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   6.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   6.8  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   9.0  

>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +1

Query: 667 HPGFLRHCAHQGLHGTHLRHE--VEQRVHNRQXHKGVHLAAARQGHPLXNRPXNG 825
           HPG++   A  GL+  H+ H   ++   H+   +  +H   A   +P  N    G
Sbjct: 13  HPGYMDGGAGAGLYEPHVAHRPGLQGLHHSPHLNHAMHPYHANHVNPTANHVMGG 67


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 24.6 bits (51), Expect = 0.97
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = -3

Query: 240 GSKHTSDDSSGKSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 112
           G+K +    + K PG S     GD + + V  H     T++ W
Sbjct: 93  GNKRSIIVVNRKMPGPSVEVCLGDEVIIDVVNHLSSDSTTIHW 135


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 614 IIHKFPDSNLMKSIIFVVAMSNWMESL 534
           II +F    L   +  VV +SNW E L
Sbjct: 239 IIARFNIERLCNGLKRVVKLSNWREPL 265


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 625 RNLGRVGTIVSRERHPGFLRHCAH 696
           R LGR+     RE H  ++ H ++
Sbjct: 302 RELGRIFRAYCRENHASWVNHLSN 325


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -3

Query: 201 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 112
           PG S +   GD++ + V  H +    ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -3

Query: 201 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 112
           PG S +   GD++ + V  H +    ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +1

Query: 595 SGNLCMITGGRNLGRVGTIVSRERHPGFLRHCAHQGL 705
           S +LC I G R  G+   + S E   GF +    + L
Sbjct: 82  SKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDL 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,063
Number of Sequences: 336
Number of extensions: 4690
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)