Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0916
         (814 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54L44 Cluster: Putative uncharacterized protein; n=1; ...    34   3.7  
UniRef50_Q12IM0 Cluster: Aminoglycoside phosphotransferase; n=1;...    34   4.9  

>UniRef50_Q54L44 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 979

 Score = 34.3 bits (75), Expect = 3.7
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = -2

Query: 243 FR*AHNVTSSPVAYSKINVFSVFIFNLVIKNISSQILL*NEKKYF*NFLYN 91
           F+   ++  SP    K N FS  IFNL+I NI+ ++ +    + F N+L+N
Sbjct: 531 FKLTQSLPPSPSLSIKFNYFSDLIFNLLIDNINDKLFIRMIIESFINYLHN 581


>UniRef50_Q12IM0 Cluster: Aminoglycoside phosphotransferase; n=1;
           Shewanella denitrificans OS217|Rep: Aminoglycoside
           phosphotransferase - Shewanella denitrificans (strain
           OS217 / ATCC BAA-1090 / DSM 15013)
          Length = 402

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 24/79 (30%), Positives = 38/79 (48%)
 Frame = -2

Query: 426 YVLNTFCIYYFSTGGRENHNPSRICRYHNLAYLNRRQPVISGLKPLAWRSCVMAIDL*NY 247
           +VL     + F       +N +RIC Y N   +   Q  +S +KPLA  S V+A+DL   
Sbjct: 83  FVLQKINCHVFPAPWTLINNSARICDYLN-QQVTAGQYQLSAIKPLATDSGVLALDLGGK 141

Query: 246 GFR*AHNVTSSPVAYSKIN 190
           GF    +   + +  S++N
Sbjct: 142 GFWRLLSYVPNSLTLSEVN 160


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 767,170,217
Number of Sequences: 1657284
Number of extensions: 15962137
Number of successful extensions: 30807
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 29437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30792
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)