Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0916
         (814 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   3.4  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   5.9  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   5.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   5.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   5.9  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   5.9  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 378 ENHNPSRICRYHNLAYLNRRQPVISGLKPLA 286
           ++H P  + +   L  L R QP +S + P A
Sbjct: 711 QSHQPGAMEQVSYLTSLERTQPTMSQMPPTA 741


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 441 INIILYVLNTFCIYYFST 388
           IN  +Y L T C+YYFST
Sbjct: 293 INQWVYPL-TGCLYYFST 309


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 490 LWSCLLSYYVKVIIHFHKYYSI 425
           ++S L S+Y+  II    YY+I
Sbjct: 345 IYSSLSSFYIPCIIMVFLYYNI 366


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 752 IWRSASPPGHRFDGPNYYVVLL 687
           +W    PPG RF  P+   V+L
Sbjct: 644 VWMIIEPPGTRFFYPDRKQVIL 665


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 752 IWRSASPPGHRFDGPNYYVVLL 687
           +W    PPG RF  P+   V+L
Sbjct: 734 VWMIIEPPGTRFFYPDRKQVIL 755


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 255 INLSPSHTIATPTASNLKLLVGGDLN 332
           +   P         SNL+L +GGDL+
Sbjct: 98  LEAGPDEPAGAEIPSNLQLYLGGDLD 123


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,013
Number of Sequences: 438
Number of extensions: 5553
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)