Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0914
(692 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5C1K0 Cluster: SJCHGC08432 protein; n=1; Schistosoma j... 85 2e-15
UniRef50_P49591 Cluster: Seryl-tRNA synthetase, cytoplasmic (EC ... 84 3e-15
UniRef50_Q4TI53 Cluster: Chromosome undetermined SCAF2397, whole... 84 4e-15
UniRef50_Q013J4 Cluster: SYS_HELAN Seryl-tRNA synthetase; n=5; E... 69 8e-11
UniRef50_A5KAF6 Cluster: Seryl-tRNA synthetase, putative; n=6; P... 64 4e-09
UniRef50_UPI0000E824F4 Cluster: PREDICTED: seryl-tRNA synthetase... 63 5e-09
UniRef50_A5BLA2 Cluster: Putative uncharacterized protein; n=1; ... 61 3e-08
UniRef50_UPI000056385E Cluster: serine--tRNA ligase; n=1; Giardi... 60 5e-08
UniRef50_Q10QF5 Cluster: Seryl-tRNA synthetase, putative, expres... 57 4e-07
UniRef50_A2XDK2 Cluster: Putative uncharacterized protein; n=2; ... 57 4e-07
UniRef50_P07284 Cluster: Seryl-tRNA synthetase, cytoplasmic (EC ... 50 5e-05
UniRef50_Q74NI2 Cluster: NEQ308; n=1; Nanoarchaeum equitans|Rep:... 46 7e-04
UniRef50_A4R1J4 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q4QH70 Cluster: Seryl-tRNA synthetase, putative; n=6; T... 45 0.002
UniRef50_A2FSM1 Cluster: Seryl-tRNA synthetase family protein; n... 45 0.002
UniRef50_A5UNY7 Cluster: Seryl-tRNA synthetase, SerS; n=2; Metha... 45 0.002
UniRef50_Q2UTJ1 Cluster: Seryl-tRNA synthetase; n=2; Eukaryota|R... 42 0.011
UniRef50_A7ARB1 Cluster: Seryl-tRNA synthetase, putative; n=1; B... 39 0.10
UniRef50_A7E4G6 Cluster: Putative uncharacterized protein; n=1; ... 39 0.10
UniRef50_Q5CVB3 Cluster: Seryl-tRNA synthetase, cytoplasmic; n=2... 39 0.13
UniRef50_Q4UCK4 Cluster: Seryl-tRNA synthetase, putative; n=1; T... 38 0.18
UniRef50_A7DPK0 Cluster: Seryl-tRNA synthetase; n=1; Candidatus ... 38 0.31
UniRef50_Q3LW41 Cluster: Seryl-tRNA synthetase; n=1; Bigelowiell... 37 0.41
UniRef50_Q2GW59 Cluster: Putative uncharacterized protein; n=1; ... 37 0.41
UniRef50_Q9AW01 Cluster: Seryl-tRNA synthetase; n=1; Guillardia ... 36 0.94
UniRef50_Q8ZTP4 Cluster: Seryl-tRNA synthetase (EC 6.1.1.11) (Se... 36 0.94
UniRef50_Q9HNJ8 Cluster: Seryl-tRNA synthetase (EC 6.1.1.11) (Se... 36 1.2
UniRef50_Q9A6T4 Cluster: Seryl-tRNA synthetase (EC 6.1.1.11) (Se... 35 1.6
UniRef50_UPI0001509B9B Cluster: hypothetical protein TTHERM_0068... 34 2.9
UniRef50_Q9RUV5 Cluster: Seryl-tRNA synthetase (EC 6.1.1.11) (Se... 34 3.8
UniRef50_Q9YAG3 Cluster: Seryl-tRNA synthetase (EC 6.1.1.11) (Se... 34 3.8
UniRef50_UPI00006CBA8E Cluster: PHD-finger family protein; n=1; ... 33 6.6
UniRef50_Q4KG67 Cluster: Flagellar assembly protein FliH; n=18; ... 33 8.8
UniRef50_Q0M376 Cluster: Seryl-tRNA synthetase; n=3; Alphaproteo... 33 8.8
UniRef50_Q6KZN5 Cluster: Seryl-tRNA synthetase (EC 6.1.1.11) (Se... 33 8.8
>UniRef50_Q5C1K0 Cluster: SJCHGC08432 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08432 protein - Schistosoma
japonicum (Blood fluke)
Length = 231
Score = 85.0 bits (201), Expect = 2e-15
Identities = 37/56 (66%), Positives = 43/56 (76%)
Frame = +2
Query: 515 VPVDDDEDHNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKGP 682
VP+ DE+ NL+ RT G FRK SHVDL+ M+DG DGERGS VAGGRGY+LKGP
Sbjct: 145 VPISKDEEDNLIIRTFGKSDFRKPLSHVDLVVMVDGFDGERGSMVAGGRGYFLKGP 200
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/64 (57%), Positives = 44/64 (68%)
Frame = +1
Query: 85 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKMYV 264
MVLDLDLFR DK G+PD IR N+ KRF+ LVD VVE D WRK R AD+ NK+K
Sbjct: 1 MVLDLDLFRTDKGGDPDVIRSNEIKRFRGTKLVDLVVEADENWRKARFRADHLNKVKNLC 60
Query: 265 AKKL 276
+K +
Sbjct: 61 SKAI 64
Score = 39.9 bits (89), Expect = 0.058
Identities = 23/85 (27%), Positives = 40/85 (47%)
Frame = +3
Query: 252 ENVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKXVRVLXXNAX 431
+N+CSK I ++K+ E S + + + L +L +L+PL++ Q+K +
Sbjct: 57 KNLCSKAIAKRIKDNEDSPDCEITIFKGVLERLDSLADVDLQPLSIAQLKSLSCFIDEEI 116
Query: 432 SKXDEGLLAAEKARSAALREVGNHL 506
L+ E R L E+GN L
Sbjct: 117 KTNAASLIELESIRQHHLYEIGNLL 141
>UniRef50_P49591 Cluster: Seryl-tRNA synthetase, cytoplasmic (EC
6.1.1.11) (Seryl-tRNA(Ser/Sec) synthetase); n=74;
Eumetazoa|Rep: Seryl-tRNA synthetase, cytoplasmic (EC
6.1.1.11) (Seryl-tRNA(Ser/Sec) synthetase) - Homo
sapiens (Human)
Length = 514
Score = 84.2 bits (199), Expect = 3e-15
Identities = 41/74 (55%), Positives = 51/74 (68%)
Frame = +1
Query: 85 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKMYV 264
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN NKLK
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 265 AKKLV*K*RTRNPV 306
+K + K + + PV
Sbjct: 61 SKTIGEKMKKKEPV 74
Score = 83.4 bits (197), Expect = 5e-15
Identities = 37/57 (64%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Frame = +2
Query: 512 SVPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKG 679
SVP+ +DED N VER GDC RKKYSHVDL+ M+DG +GE+G+ VAG RGY+LKG
Sbjct: 142 SVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKG 198
Score = 66.9 bits (156), Expect = 4e-10
Identities = 40/85 (47%), Positives = 50/85 (58%)
Frame = +3
Query: 252 ENVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKXVRVLXXNAX 431
+N+CSK IG KMK KEP G +DE VP + + +LT D L L V+QIK VR+L A
Sbjct: 57 KNLCSKTIGEKMKKKEPVG-DDESVPENVLS-FDDLTADALANLKVSQIKKVRLLIDEAI 114
Query: 432 SKXDEGLLAAEKARSAALREVGNHL 506
K D + E R LRE+GN L
Sbjct: 115 LKCDAERIKLEAERFENLREIGNLL 139
>UniRef50_Q4TI53 Cluster: Chromosome undetermined SCAF2397, whole
genome shotgun sequence; n=2; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF2397,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 175
Score = 83.8 bits (198), Expect = 4e-15
Identities = 38/64 (59%), Positives = 47/64 (73%)
Frame = +1
Query: 85 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKMYV 264
MVLDLDLFR DK G+P+ +RE+Q+KRFKDV LVD +V DT WRK R ADN NK K
Sbjct: 1 MVLDLDLFRTDKGGDPEIVRESQRKRFKDVTLVDKLVAADTEWRKCRFTADNLNKAKNLC 60
Query: 265 AKKL 276
++ +
Sbjct: 61 SRSI 64
>UniRef50_Q013J4 Cluster: SYS_HELAN Seryl-tRNA synthetase; n=5;
Eukaryota|Rep: SYS_HELAN Seryl-tRNA synthetase -
Ostreococcus tauri
Length = 624
Score = 69.3 bits (162), Expect = 8e-11
Identities = 33/58 (56%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = +2
Query: 509 ESVPVDDDEDHNLVERTDGDCGFRKKY-SHVDLICMIDGMDGERGSAVAGGRGYYLKG 679
+SVP+DD+ED+N VER G+ + +HVDLI M+D D E+G+ VAGGRGYYLKG
Sbjct: 120 DSVPIDDNEDNNKVERVWGEKRMEENLPNHVDLIAMLDIADTEQGTEVAGGRGYYLKG 177
Score = 47.2 bits (107), Expect = 4e-04
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Frame = +1
Query: 88 VLDLDLFRADKDGNP----DKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEAD----NF 243
+LD++L R DK G+P D +RE++++R++ VD V+ D WR RHE D F
Sbjct: 1 MLDVNLLRPDKGGDPVRSDDVVRESERRRYRKPEGVDDVLTLDLEWRDARHELDRIGGEF 60
Query: 244 NKLKMYVA 267
NK VA
Sbjct: 61 NKANKEVA 68
>UniRef50_A5KAF6 Cluster: Seryl-tRNA synthetase, putative; n=6;
Plasmodium|Rep: Seryl-tRNA synthetase, putative -
Plasmodium vivax
Length = 616
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/64 (46%), Positives = 42/64 (65%)
Frame = +1
Query: 85 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKMYV 264
MVLD++LFR +K GNP+KI+E++KKRF D VD V+E D WRK + + K V
Sbjct: 67 MVLDINLFRKEKGGNPEKIKESEKKRFHDETNVDKVIEFDEQWRKCIFKLEELKKNINLV 126
Query: 265 AKKL 276
K++
Sbjct: 127 NKEI 130
Score = 37.5 bits (83), Expect = 0.31
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 572 GFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKG 679
G ++ Y H DL+ I G + ++G VAG RGYYL G
Sbjct: 246 GGKRYYYHFDLLRKIGGANFKKGIQVAGHRGYYLTG 281
>UniRef50_UPI0000E824F4 Cluster: PREDICTED: seryl-tRNA synthetase,
partial; n=2; Gallus gallus|Rep: PREDICTED: seryl-tRNA
synthetase, partial - Gallus gallus
Length = 281
Score = 63.3 bits (147), Expect = 5e-09
Identities = 40/78 (51%), Positives = 49/78 (62%)
Frame = +3
Query: 252 ENVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKXVRVLXXNAX 431
+N+CSK IG KMK KEP GS DE VP E A NL LT D L L V+QIK VR+L A
Sbjct: 11 KNLCSKTIGDKMKKKEPVGS-DESVP-ESAQNLDELTADVLGGLQVSQIKKVRLLIDEAI 68
Query: 432 SKXDEGLLAAEKARSAAL 485
+ D ++A +RS A+
Sbjct: 69 LECDAERVSAAGSRSHAV 86
>UniRef50_A5BLA2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 466
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 4/65 (6%)
Frame = +1
Query: 88 VLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADN----FNKLK 255
+LD++LFR DK NP+ IRE+Q++R+ +V LVD V+ D WR+ + E +N FNK+
Sbjct: 1 MLDINLFREDKGHNPEIIRESQRRRYANVDLVDEVIHLDKEWRQRQFEFENLRKEFNKIN 60
Query: 256 MYVAK 270
VAK
Sbjct: 61 KQVAK 65
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +2
Query: 509 ESVPVDDDEDHNLVERTDGDCGFRKKY-SHVDLICMIDGMDGERGSAVAGGRGYYLKG 679
+SVPV +DE +N V R+ G+ K +HV+L+ ++ D ++G+ +AGGRG+YLKG
Sbjct: 150 DSVPVSNDEANNAVIRSWGEKKVEPKLKNHVELVELLGIADLKKGANIAGGRGFYLKG 207
>UniRef50_UPI000056385E Cluster: serine--tRNA ligase; n=1; Giardia
lamblia ATCC 50803|Rep: serine--tRNA ligase - Giardia
lamblia ATCC 50803
Length = 457
Score = 60.1 bits (139), Expect = 5e-08
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +1
Query: 85 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNK 249
MVLD++LFR K GNP+K++E+Q++R+ +VD V+E D W +EA +K
Sbjct: 1 MVLDINLFRVSKGGNPEKVKESQRRRYASTEIVDKVIELDKAWVSKDYEASQLSK 55
Score = 36.7 bits (81), Expect = 0.54
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Frame = +2
Query: 509 ESVPVDDDEDHNLVERTDGDC--------GFRKKYSHVDLICMIDGMDGERGSAVAGGRG 664
++V VD++ED+N V T+ G K +HV L+ MD RG ++G RG
Sbjct: 115 DAVVVDNNEDNNKVVYTNDAVVRANPSPNGVEKTLNHVTLMTNCRMMDCPRGVKISGNRG 174
Query: 665 YYLKG 679
Y+L G
Sbjct: 175 YFLTG 179
>UniRef50_Q10QF5 Cluster: Seryl-tRNA synthetase, putative,
expressed; n=4; Oryza sativa|Rep: Seryl-tRNA synthetase,
putative, expressed - Oryza sativa subsp. japonica
(Rice)
Length = 445
Score = 57.2 bits (132), Expect = 4e-07
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +2
Query: 509 ESVPVDDDEDHNLVERTDGDCGFRKKY-SHVDLICMIDGMDGERGSAVAGGRGYYLK 676
ESVPV DDE +NL+ RT G+ +HVDL M+D + E+G VAGGRGYYLK
Sbjct: 114 ESVPVSDDEANNLIVRTWGEKRMEGNLKNHVDLCKMLDIVALEKGVDVAGGRGYYLK 170
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/54 (40%), Positives = 35/54 (64%)
Frame = +1
Query: 88 VLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNK 249
+LD++LFR +K G+P+ IR++Q+ R V LVD V+ D WR+ + E D +
Sbjct: 1 MLDINLFRTEKGGDPELIRKSQRNRSASVELVDEVIALDDQWRQRQFELDKIRQ 54
>UniRef50_A2XDK2 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 393
Score = 57.2 bits (132), Expect = 4e-07
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +2
Query: 509 ESVPVDDDEDHNLVERTDGDCGFRKKY-SHVDLICMIDGMDGERGSAVAGGRGYYLK 676
ESVPV DDE +NL+ RT G+ +HVDL M+D + E+G VAGGRGYYLK
Sbjct: 114 ESVPVSDDEANNLIVRTWGEKRMEGNLKNHVDLCKMLDIVALEKGVDVAGGRGYYLK 170
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/54 (40%), Positives = 35/54 (64%)
Frame = +1
Query: 88 VLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNK 249
+LD++LFR +K G+P+ IR++Q+ R V LVD V+ D WR+ + E D +
Sbjct: 1 MLDINLFRTEKGGDPELIRKSQRNRSASVELVDEVIALDDQWRQRQFELDKIRQ 54
>UniRef50_P07284 Cluster: Seryl-tRNA synthetase, cytoplasmic (EC
6.1.1.11) (Seryl-tRNA(Ser/Sec) synthetase); n=43;
Eukaryota|Rep: Seryl-tRNA synthetase, cytoplasmic (EC
6.1.1.11) (Seryl-tRNA(Ser/Sec) synthetase) -
Saccharomyces cerevisiae (Baker's yeast)
Length = 462
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +1
Query: 88 VLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNK 249
+LD++ F DK GNP+ IR++QK R V +VD ++ W K R E D NK
Sbjct: 1 MLDINQFIEDKGGNPELIRQSQKARNASVEIVDEIISDYKDWVKTRFELDELNK 54
>UniRef50_Q74NI2 Cluster: NEQ308; n=1; Nanoarchaeum equitans|Rep:
NEQ308 - Nanoarchaeum equitans
Length = 484
Score = 46.4 bits (105), Expect = 7e-04
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +1
Query: 130 PDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKMYVAKKL 276
P+K +E KKRF D ++VD + D LWR L+ E DN L ++K +
Sbjct: 11 PEKYKEMLKKRFMDTSIVDEFLAYDNLWRSLKKELDNLRCLHNAISKAI 59
>UniRef50_A4R1J4 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 443
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Frame = +2
Query: 509 ESVPVDDDEDHNLVERTDGDCGF----RKKYSHVDLICMIDGMDGERGSAVAGGRGYYLK 676
+SVPV D+ED+N + RT G R+ SH +++ +DG D +RG G RGY+L+
Sbjct: 115 DSVPVSDNEDNNEIIRTYCPEGLTVEKRECLSHHEVLTRLDGYDPDRGIKAVGHRGYFLR 174
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/64 (35%), Positives = 37/64 (57%)
Frame = +1
Query: 85 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKMYV 264
MVLD+ F ++ GNP+KIRE+Q++R V +VD ++ R+ ++ A N V
Sbjct: 1 MVLDVTDFITERGGNPEKIRESQRRRHAPVEVVDEIIAMWDDHRRTQYAATQMNAQINDV 60
Query: 265 AKKL 276
KK+
Sbjct: 61 QKKI 64
>UniRef50_Q4QH70 Cluster: Seryl-tRNA synthetase, putative; n=6;
Trypanosomatidae|Rep: Seryl-tRNA synthetase, putative -
Leishmania major
Length = 474
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Frame = +2
Query: 509 ESVPVDDDEDH-NLVERTDGDCGFRKKYSHVDLICMIDGMDGERG-SAVAGGRGYYLKG 679
ESVPV +DE+ N+V RT GD R + +HVD + + MD + +A+AGGR + L+G
Sbjct: 142 ESVPVSNDEETGNVVVRTFGDVTRRMRMTHVDCMERLGLMDTSKTVTAMAGGRAFVLRG 200
Score = 34.7 bits (76), Expect = 2.2
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +1
Query: 85 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKL 252
M LD+ LFR + D +RE++++R+ +VD ++E D WR+ + + K+
Sbjct: 1 MGLDIQLFRDPEMA--DIVRESERRRYARPEIVDDIIEIDKRWRRTQFLTEASKKM 54
>UniRef50_A2FSM1 Cluster: Seryl-tRNA synthetase family protein; n=2;
Trichomonas vaginalis G3|Rep: Seryl-tRNA synthetase
family protein - Trichomonas vaginalis G3
Length = 501
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +2
Query: 593 HVDLICMIDGMDGERGSAVAGGRGYYLKG 679
H +L+ MIDG + ERG+ VAG RGYYLKG
Sbjct: 161 HNELLAMIDGYEPERGARVAGHRGYYLKG 189
>UniRef50_A5UNY7 Cluster: Seryl-tRNA synthetase, SerS; n=2;
Methanobacteriaceae|Rep: Seryl-tRNA synthetase, SerS -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 425
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +2
Query: 509 ESVPVDDDEDHNLVERTDGDCG-FR-KKYSHVDLICMIDGMDGERGSAVAGGRGYYLK 676
E VP+ D ED N + + G+ F + +HVDLI IDG D + + +AG R YYLK
Sbjct: 109 EDVPISDTEDDNKIVKEYGEIPEFDFEPLNHVDLIEKIDGADMKTAAQIAGARFYYLK 166
Score = 41.1 bits (92), Expect = 0.025
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +1
Query: 88 VLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRK 219
+LD+ LFR NP+ I +++KKRF+ + V+E DTLWR+
Sbjct: 1 MLDIKLFRE----NPELIFDSEKKRFRGTETAEKVIEYDTLWRE 40
>UniRef50_Q2UTJ1 Cluster: Seryl-tRNA synthetase; n=2; Eukaryota|Rep:
Seryl-tRNA synthetase - Aspergillus oryzae
Length = 494
Score = 42.3 bits (95), Expect = 0.011
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Frame = +1
Query: 88 VLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHE----ADNFNKLK 255
+LD+ F +D+ GNP+K++E+Q+KRF ++VD ++ R+ R+E N L+
Sbjct: 1 MLDIADFVSDRGGNPNKVKESQRKRFAPESVVDEILTLYEEARRARYEVMQIGSQLNGLQ 60
Query: 256 MYVAKK 273
+ KK
Sbjct: 61 KEIGKK 66
Score = 33.9 bits (74), Expect = 3.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 590 SHVDLICMIDGMDGERGSAVAGGRGYYLKG 679
SH +++ +DG D ERG + G RGY L G
Sbjct: 165 SHHEVLTRLDGYDPERGVKIVGHRGYCLTG 194
>UniRef50_A7ARB1 Cluster: Seryl-tRNA synthetase, putative; n=1;
Babesia bovis|Rep: Seryl-tRNA synthetase, putative -
Babesia bovis
Length = 502
Score = 39.1 bits (87), Expect = 0.10
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
Frame = +2
Query: 527 DDEDHNLVE-RTDGDCGFRKK----YSHVDLICMIDGMDGERGSAVAGGRGYYLKGPC 685
D ++++ E +T G+ G R SH D++ ++G++ ++G VAG RGYYL+G C
Sbjct: 159 DIKEYSTTETKTVGEHGIRLPPWPVLSHCDVMLNLNGVNLKKGIEVAGHRGYYLRGQC 216
>UniRef50_A7E4G6 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 598
Score = 39.1 bits (87), Expect = 0.10
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Frame = +2
Query: 509 ESVPVDDDEDHNLVERTDGDCG--FRKK--YSHVDLICMIDGMDGERGSAV 649
ESVPV++DEDHN + RT G KK SH +++ +DG D ERG V
Sbjct: 280 ESVPVNNDEDHNELLRTWAPEGVTVEKKDVLSHHEVLTRLDGYDPERGVKV 330
>UniRef50_Q5CVB3 Cluster: Seryl-tRNA synthetase, cytoplasmic; n=2;
Cryptosporidium|Rep: Seryl-tRNA synthetase, cytoplasmic
- Cryptosporidium parvum Iowa II
Length = 454
Score = 38.7 bits (86), Expect = 0.13
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +2
Query: 515 VPVDDDEDHNLVERTDGDC------GFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLK 676
VP+ + ED NLV RT G+ G K H +++ + D +G+ +AG RGY+LK
Sbjct: 119 VPISNTEDDNLVLRTWGEIPDIKVDGTPGKLHHNEIMSRLGFYDSVKGAELAGHRGYFLK 178
Score = 36.3 bits (80), Expect = 0.71
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +1
Query: 85 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWR----KLRHEADNFNKL 252
M +D++ R +K G+ KI E++ R+K + ++ +V+ D WR KL N +
Sbjct: 1 MPIDINRIRVEKGGDYQKIAESEMARYKGLETLEELVKVDQKWREDMFKLEQSKKELNSI 60
Query: 253 KMYVAK 270
+A+
Sbjct: 61 SKEIAQ 66
>UniRef50_Q4UCK4 Cluster: Seryl-tRNA synthetase, putative; n=1;
Theileria annulata|Rep: Seryl-tRNA synthetase, putative
- Theileria annulata
Length = 532
Score = 38.3 bits (85), Expect = 0.18
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +1
Query: 85 MVLDLDLFRADKDGNPDK-IRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKMY 261
MVLD++ FR D N K ++E++++R + ++VD V+E D W+K D K
Sbjct: 1 MVLDINYFR---DENLLKQLKESEERRCESNSVVDKVIEADKDWKKAMFAYDQLKKSVNE 57
Query: 262 VAKKL 276
V+KK+
Sbjct: 58 VSKKI 62
>UniRef50_A7DPK0 Cluster: Seryl-tRNA synthetase; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Seryl-tRNA synthetase
- Candidatus Nitrosopumilus maritimus SCM1
Length = 421
Score = 37.5 bits (83), Expect = 0.31
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +2
Query: 509 ESVPVDDDEDHNLVERTDGDCG-FRKKYS-HVDLICMIDGMDGERGSAVAGGRGYYLK 676
ESVPV D+ N R G+ F K + H+D+ +D +D ER + VAG R YYLK
Sbjct: 109 ESVPVGPDDTANKEMRKWGEIPQFDFKINDHIDMSENLDLVDLERAAKVAGARFYYLK 166
>UniRef50_Q3LW41 Cluster: Seryl-tRNA synthetase; n=1; Bigelowiella
natans|Rep: Seryl-tRNA synthetase - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 408
Score = 37.1 bits (82), Expect = 0.41
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 584 KYSHVDLICMIDGMDGERGSAVAGGRGYYLKG 679
+YSHV+++ +D +D G AG RGY+LKG
Sbjct: 115 RYSHVEIMRKLDIVDLNNGLKAAGNRGYFLKG 146
>UniRef50_Q2GW59 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 608
Score = 37.1 bits (82), Expect = 0.41
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +1
Query: 115 DKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFN 246
++ GNP+KIRE+Q+KR V +VD V+ R+ ++A N
Sbjct: 197 ERGGNPEKIRESQRKRHAPVEVVDEVIAMWEDHRRTAYDATQCN 240
>UniRef50_Q9AW01 Cluster: Seryl-tRNA synthetase; n=1; Guillardia
theta|Rep: Seryl-tRNA synthetase - Guillardia theta
(Cryptomonas phi)
Length = 425
Score = 35.9 bits (79), Expect = 0.94
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +2
Query: 578 RKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKGP 682
+KK +HV+L+ + +D +RG V+G R YYL GP
Sbjct: 134 KKKTNHVELLKNLRIVDYKRGVKVSGNRAYYLIGP 168
>UniRef50_Q8ZTP4 Cluster: Seryl-tRNA synthetase (EC 6.1.1.11)
(Seryl-tRNA(Ser/Sec) synthetase); n=1; Pyrobaculum
aerophilum|Rep: Seryl-tRNA synthetase (EC 6.1.1.11)
(Seryl-tRNA(Ser/Sec) synthetase) - Pyrobaculum
aerophilum
Length = 451
Score = 35.9 bits (79), Expect = 0.94
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +1
Query: 127 NPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEAD----NFNKLKMYVAK 270
+PD +R+ R D +LVD +E D WR+L+ E D +NKL AK
Sbjct: 12 SPDVVRKVLTARRMDASLVDKFLELDEKWRRLKKEVDELRHEYNKLSKEGAK 63
>UniRef50_Q9HNJ8 Cluster: Seryl-tRNA synthetase (EC 6.1.1.11)
(Seryl-tRNA(Ser/Sec) synthetase); n=6;
Halobacteriaceae|Rep: Seryl-tRNA synthetase (EC
6.1.1.11) (Seryl-tRNA(Ser/Sec) synthetase) -
Halobacterium salinarium (Halobacterium halobium)
Length = 460
Score = 35.5 bits (78), Expect = 1.2
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +2
Query: 509 ESVPVDDDEDHNLVERTDGDCGFR----KKYSHVDLICMIDGMDGERGSAVAGGRGYYLK 676
E PV D E N+ R +G R H DL +D +D ERG+ V+GG Y+ K
Sbjct: 111 EDAPVGDSEAENVERRREGFDDRRDLPESVVPHYDLGEELDILDFERGAKVSGGGFYFSK 170
Query: 677 G 679
G
Sbjct: 171 G 171
>UniRef50_Q9A6T4 Cluster: Seryl-tRNA synthetase (EC 6.1.1.11)
(Seryl-tRNA(Ser/Sec) synthetase); n=8;
Alphaproteobacteria|Rep: Seryl-tRNA synthetase (EC
6.1.1.11) (Seryl-tRNA(Ser/Sec) synthetase) - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 482
Score = 35.1 bits (77), Expect = 1.6
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Frame = +2
Query: 506 AESVPVDDDEDHNLVERTDGDCG------FRKKYSHVDLICMIDGMDGERGSAVAGGRGY 667
A VP +DE NL +R GD K HVDL + GMD E + ++G R
Sbjct: 110 APEVPAGEDEHGNLEQRRWGDATKLPAGKLNKPKDHVDLGAALGGMDFEAAARMSGARFV 169
Query: 668 YLK 676
LK
Sbjct: 170 VLK 172
>UniRef50_UPI0001509B9B Cluster: hypothetical protein
TTHERM_00683210; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00683210 - Tetrahymena
thermophila SB210
Length = 604
Score = 34.3 bits (75), Expect = 2.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 240 IVSFVAQFPPQGVLLDDCIHKGNIFKSLLLIFSNFIW 130
I + + Q+ G+ L DC+H GN K I + FIW
Sbjct: 402 IYTLLDQYDSSGLTLLDCLHSGNFLKFQTFILNLFIW 438
>UniRef50_Q9RUV5 Cluster: Seryl-tRNA synthetase (EC 6.1.1.11)
(Seryl-tRNA(Ser/Sec) synthetase); n=9; Bacteria|Rep:
Seryl-tRNA synthetase (EC 6.1.1.11) (Seryl-tRNA(Ser/Sec)
synthetase) - Deinococcus radiodurans
Length = 425
Score = 33.9 bits (74), Expect = 3.8
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 515 VPVDDDEDHNLVERTDGDC-GFR-KKYSHVDLICMIDGMDGERGSAVAGGRGYYLKG 679
VPV DED N+ R +G+ GF V+++ D ER + V+G R Y LKG
Sbjct: 109 VPVGKDEDDNVELRREGELPGFDFTPLDQVEILEKQGWADFERVARVSGSRSYLLKG 165
>UniRef50_Q9YAG3 Cluster: Seryl-tRNA synthetase (EC 6.1.1.11)
(Seryl-tRNA(Ser/Sec) synthetase); n=9; Thermoprotei|Rep:
Seryl-tRNA synthetase (EC 6.1.1.11) (Seryl-tRNA(Ser/Sec)
synthetase) - Aeropyrum pernix
Length = 460
Score = 33.9 bits (74), Expect = 3.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 127 NPDKIRENQKKRFKDVALVDAVVEQDTLWRKL 222
NP+ ++E+ +KR D A+VD D WR+L
Sbjct: 13 NPEALKEHVRKRLMDPAIVDRAYRLDVEWRRL 44
>UniRef50_UPI00006CBA8E Cluster: PHD-finger family protein; n=1;
Tetrahymena thermophila SB210|Rep: PHD-finger family
protein - Tetrahymena thermophila SB210
Length = 1487
Score = 33.1 bits (72), Expect = 6.6
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +3
Query: 252 ENVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNL 374
EN S+E LK KN+EPS S+DE E +L DNL
Sbjct: 262 ENNISEESQLKQKNEEPSQSQDEIDEKEKKCDLEQTNEDNL 302
>UniRef50_Q4KG67 Cluster: Flagellar assembly protein FliH; n=18;
Pseudomonas|Rep: Flagellar assembly protein FliH -
Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)
Length = 280
Score = 32.7 bits (71), Expect = 8.8
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +3
Query: 297 EPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKXVRVLXXNA--XSKXDEGLLAAE-K 467
+P E EP P E+ + + + ++PLT+ +++ +R N + EG + K
Sbjct: 30 DPEPPEPEPEPEEVQEEIEEVPLEEVQPLTLEELESIRQEAYNEGFATGEKEGFHSTTLK 89
Query: 468 ARSAALREVGNHLQSLYQLM 527
R A + LQ+L QLM
Sbjct: 90 VRQEAEVALSAKLQALEQLM 109
>UniRef50_Q0M376 Cluster: Seryl-tRNA synthetase; n=3;
Alphaproteobacteria|Rep: Seryl-tRNA synthetase -
Caulobacter sp. K31
Length = 474
Score = 32.7 bits (71), Expect = 8.8
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = +2
Query: 506 AESVPVDDDEDHNLVERTDGDCG------FRKKYSHVDLICMIDGMDGERGSAVAGGRGY 667
A VP +DE N+ R GD HVDL + GMD E + ++G R
Sbjct: 110 APEVPAGEDEAGNVEIRRWGDASKLPAGRLNNPKDHVDLGAALGGMDFEAAARMSGARFV 169
Query: 668 YLKG 679
LKG
Sbjct: 170 VLKG 173
>UniRef50_Q6KZN5 Cluster: Seryl-tRNA synthetase (EC 6.1.1.11)
(Seryl-tRNA(Ser/Sec) synthetase); n=4;
Thermoplasmatales|Rep: Seryl-tRNA synthetase (EC
6.1.1.11) (Seryl-tRNA(Ser/Sec) synthetase) - Picrophilus
torridus
Length = 444
Score = 32.7 bits (71), Expect = 8.8
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +2
Query: 575 FRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLK 676
+R K SHVDLI ++ D ER +AG R Y+LK
Sbjct: 154 YRPK-SHVDLISELNLADIERAGKIAGARFYFLK 186
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,109,692
Number of Sequences: 1657284
Number of extensions: 12090706
Number of successful extensions: 36677
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36661
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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