Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0914
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   0.44 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.4  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    22   4.1  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   5.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   5.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   5.5  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   7.2  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   9.6  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   9.6  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   9.6  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 133 DKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLK 255
           D IR ++  RF    +V    EQ+TL  +++ E+D  + LK
Sbjct: 331 DIIRIDRNTRFNQDKIVALRQEQETLKSQVQRESDVVDSLK 371


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 174 NIFKSLLLIFSNFIWIT 124
           N++  LLL+F  ++WI+
Sbjct: 121 NLYMVLLLLFDAYLWIS 137


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +1

Query: 454 WLLRKRVPLHSGKLEIICRVC 516
           WLL+  +  H+G+    C  C
Sbjct: 21  WLLQGHIRTHTGEKPFSCTYC 41


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 288 KNKEPSGSEDEPVPSEIANN 347
           KN+E +G    P P E++N+
Sbjct: 147 KNEEVAGGFTCPAPGEVSNS 166


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 288 KNKEPSGSEDEPVPSEIANN 347
           KN+E +G    P P E++N+
Sbjct: 147 KNEEVAGGFTCPAPGEVSNS 166


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 16  TCLIILKNISTYVIYLS*INNVNMV 90
           TC  I+  ++TY++ L   NN + V
Sbjct: 348 TCEEIVAGVTTYLVILIQFNNSDFV 372


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 178 LVDAVVEQDTLWRKLRHEADNFNKLKMYV 264
           L +A V+   LW++LR+E     +L + +
Sbjct: 130 LKNARVKNTALWKQLRYEHYRLYQLSVLI 158


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 460 LRKRVPLHSGKLEIICRVC 516
           L K + +HSG+    C++C
Sbjct: 93  LTKHLRIHSGEKPYECKLC 111


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 460 LRKRVPLHSGKLEIICRVC 516
           L K + +HSG+    C++C
Sbjct: 349 LTKHLRIHSGEKPYECKLC 367


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -3

Query: 351 PGYWRSPRGRVRLQSHWVPCSSFSNQFLCYIH 256
           PG      G   +++ WVP + F N+   Y H
Sbjct: 107 PGVETLSVGSEFIKNIWVPDTFFVNEKQSYFH 138


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,283
Number of Sequences: 336
Number of extensions: 3187
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)