Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0914
(692 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D49914-1|BAA95602.1| 514|Homo sapiens Seryl tRNA Synthetase pro... 84 4e-16
BC111398-1|AAI11399.1| 511|Homo sapiens SARS protein protein. 84 4e-16
BC009390-1|AAH09390.1| 514|Homo sapiens seryl-tRNA synthetase p... 84 4e-16
BC000716-1|AAH00716.1| 514|Homo sapiens seryl-tRNA synthetase p... 84 4e-16
AL356389-5|CAI13600.1| 536|Homo sapiens seryl-tRNA synthetase p... 84 4e-16
AL356389-4|CAI13599.1| 514|Homo sapiens seryl-tRNA synthetase p... 84 4e-16
AK222677-1|BAD96397.1| 514|Homo sapiens seryl-tRNA synthetase v... 84 4e-16
X91257-1|CAA62635.1| 514|Homo sapiens seryl-tRNA synthetase pro... 83 7e-16
AF275150-1|AAF91411.1| 1115|Homo sapiens transmembrane-type prot... 33 1.3
M81750-1|AAA69696.1| 407|Homo sapiens myeloid cell nuclear diff... 32 2.2
BC032319-1|AAH32319.1| 407|Homo sapiens myeloid cell nuclear di... 32 2.2
BC020715-1|AAH20715.1| 310|Homo sapiens Unknown (protein for IM... 32 2.2
AL513205-11|CAH73796.1| 407|Homo sapiens myeloid cell nuclear d... 32 2.2
D15049-1|BAA03645.2| 1117|Homo sapiens protein tyrosine phosphat... 31 3.9
BC111716-1|AAI11717.1| 1115|Homo sapiens protein tyrosine phosph... 31 3.9
BC111715-1|AAI11716.1| 937|Homo sapiens PTPRH protein protein. 31 3.9
BC146797-1|AAI46798.1| 754|Homo sapiens nibrin protein. 30 6.8
AY566246-1|AAS59158.1| 754|Homo sapiens Nijmegen breakage syndr... 30 6.8
AK223256-1|BAD96976.1| 754|Homo sapiens nibrin variant protein. 30 6.8
AF069291-2|AAC62232.1| 754|Homo sapiens nibrin protein. 30 6.8
AF058696-1|AAC39752.1| 754|Homo sapiens cell cycle regulatory p... 30 6.8
AF051334-1|AAC39732.1| 754|Homo sapiens nibrin protein. 30 6.8
AB013139-1|BAA28616.1| 754|Homo sapiens NBS1 protein. 30 6.8
>D49914-1|BAA95602.1| 514|Homo sapiens Seryl tRNA Synthetase
protein.
Length = 514
Score = 84.2 bits (199), Expect = 4e-16
Identities = 41/74 (55%), Positives = 51/74 (68%)
Frame = +1
Query: 85 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKMYV 264
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN NKLK
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 265 AKKLV*K*RTRNPV 306
+K + K + + PV
Sbjct: 61 SKTIGEKMKKKEPV 74
Score = 83.4 bits (197), Expect = 7e-16
Identities = 37/57 (64%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Frame = +2
Query: 512 SVPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKG 679
SVP+ +DED N VER GDC RKKYSHVDL+ M+DG +GE+G+ VAG RGY+LKG
Sbjct: 142 SVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKG 198
Score = 66.9 bits (156), Expect = 6e-11
Identities = 40/85 (47%), Positives = 50/85 (58%)
Frame = +3
Query: 252 ENVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKXVRVLXXNAX 431
+N+CSK IG KMK KEP G +DE VP + + +LT D L L V+QIK VR+L A
Sbjct: 57 KNLCSKTIGEKMKKKEPVG-DDESVPENVLS-FDDLTADALANLKVSQIKKVRLLIDEAI 114
Query: 432 SKXDEGLLAAEKARSAALREVGNHL 506
K D + E R LRE+GN L
Sbjct: 115 LKCDAERIKLEAERFENLREIGNLL 139
>BC111398-1|AAI11399.1| 511|Homo sapiens SARS protein protein.
Length = 511
Score = 84.2 bits (199), Expect = 4e-16
Identities = 41/74 (55%), Positives = 51/74 (68%)
Frame = +1
Query: 85 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKMYV 264
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN NKLK
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 265 AKKLV*K*RTRNPV 306
+K + K + + PV
Sbjct: 61 SKTIGEKMKKKEPV 74
Score = 83.4 bits (197), Expect = 7e-16
Identities = 37/57 (64%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Frame = +2
Query: 512 SVPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKG 679
SVP+ +DED N VER GDC RKKYSHVDL+ M+DG +GE+G+ VAG RGY+LKG
Sbjct: 142 SVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKG 198
Score = 66.9 bits (156), Expect = 6e-11
Identities = 40/85 (47%), Positives = 50/85 (58%)
Frame = +3
Query: 252 ENVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKXVRVLXXNAX 431
+N+CSK IG KMK KEP G +DE VP + + +LT D L L V+QIK VR+L A
Sbjct: 57 KNLCSKTIGEKMKKKEPVG-DDESVPENVLS-FDDLTADALANLKVSQIKKVRLLIDEAI 114
Query: 432 SKXDEGLLAAEKARSAALREVGNHL 506
K D + E R LRE+GN L
Sbjct: 115 LKCDAERIKLEAERFENLREIGNLL 139
>BC009390-1|AAH09390.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 84.2 bits (199), Expect = 4e-16
Identities = 41/74 (55%), Positives = 51/74 (68%)
Frame = +1
Query: 85 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKMYV 264
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN NKLK
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 265 AKKLV*K*RTRNPV 306
+K + K + + PV
Sbjct: 61 SKTIGEKMKKKEPV 74
Score = 83.4 bits (197), Expect = 7e-16
Identities = 37/57 (64%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Frame = +2
Query: 512 SVPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKG 679
SVP+ +DED N VER GDC RKKYSHVDL+ M+DG +GE+G+ VAG RGY+LKG
Sbjct: 142 SVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKG 198
Score = 66.9 bits (156), Expect = 6e-11
Identities = 40/85 (47%), Positives = 50/85 (58%)
Frame = +3
Query: 252 ENVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKXVRVLXXNAX 431
+N+CSK IG KMK KEP G +DE VP + + +LT D L L V+QIK VR+L A
Sbjct: 57 KNLCSKTIGEKMKKKEPVG-DDESVPENVLS-FDDLTADALANLKVSQIKKVRLLIDEAI 114
Query: 432 SKXDEGLLAAEKARSAALREVGNHL 506
K D + E R LRE+GN L
Sbjct: 115 LKCDAERIKLEAERFENLREIGNLL 139
>BC000716-1|AAH00716.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 84.2 bits (199), Expect = 4e-16
Identities = 41/74 (55%), Positives = 51/74 (68%)
Frame = +1
Query: 85 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKMYV 264
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN NKLK
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 265 AKKLV*K*RTRNPV 306
+K + K + + PV
Sbjct: 61 SKTIGEKMKKKEPV 74
Score = 83.4 bits (197), Expect = 7e-16
Identities = 37/57 (64%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Frame = +2
Query: 512 SVPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKG 679
SVP+ +DED N VER GDC RKKYSHVDL+ M+DG +GE+G+ VAG RGY+LKG
Sbjct: 142 SVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKG 198
Score = 66.9 bits (156), Expect = 6e-11
Identities = 40/85 (47%), Positives = 50/85 (58%)
Frame = +3
Query: 252 ENVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKXVRVLXXNAX 431
+N+CSK IG KMK KEP G +DE VP + + +LT D L L V+QIK VR+L A
Sbjct: 57 KNLCSKTIGEKMKKKEPVG-DDESVPENVLS-FDDLTADALANLKVSQIKKVRLLIDEAI 114
Query: 432 SKXDEGLLAAEKARSAALREVGNHL 506
K D + E R LRE+GN L
Sbjct: 115 LKCDAERIKLEAERFENLREIGNLL 139
>AL356389-5|CAI13600.1| 536|Homo sapiens seryl-tRNA synthetase
protein.
Length = 536
Score = 84.2 bits (199), Expect = 4e-16
Identities = 41/74 (55%), Positives = 51/74 (68%)
Frame = +1
Query: 85 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKMYV 264
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN NKLK
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 265 AKKLV*K*RTRNPV 306
+K + K + + PV
Sbjct: 61 SKTIGEKMKKKEPV 74
Score = 83.4 bits (197), Expect = 7e-16
Identities = 37/57 (64%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Frame = +2
Query: 512 SVPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKG 679
SVP+ +DED N VER GDC RKKYSHVDL+ M+DG +GE+G+ VAG RGY+LKG
Sbjct: 142 SVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKG 198
Score = 66.9 bits (156), Expect = 6e-11
Identities = 40/85 (47%), Positives = 50/85 (58%)
Frame = +3
Query: 252 ENVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKXVRVLXXNAX 431
+N+CSK IG KMK KEP G +DE VP + + +LT D L L V+QIK VR+L A
Sbjct: 57 KNLCSKTIGEKMKKKEPVG-DDESVPENVLS-FDDLTADALANLKVSQIKKVRLLIDEAI 114
Query: 432 SKXDEGLLAAEKARSAALREVGNHL 506
K D + E R LRE+GN L
Sbjct: 115 LKCDAERIKLEAERFENLREIGNLL 139
>AL356389-4|CAI13599.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 84.2 bits (199), Expect = 4e-16
Identities = 41/74 (55%), Positives = 51/74 (68%)
Frame = +1
Query: 85 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKMYV 264
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN NKLK
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 265 AKKLV*K*RTRNPV 306
+K + K + + PV
Sbjct: 61 SKTIGEKMKKKEPV 74
Score = 83.4 bits (197), Expect = 7e-16
Identities = 37/57 (64%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Frame = +2
Query: 512 SVPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKG 679
SVP+ +DED N VER GDC RKKYSHVDL+ M+DG +GE+G+ VAG RGY+LKG
Sbjct: 142 SVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKG 198
Score = 66.9 bits (156), Expect = 6e-11
Identities = 40/85 (47%), Positives = 50/85 (58%)
Frame = +3
Query: 252 ENVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKXVRVLXXNAX 431
+N+CSK IG KMK KEP G +DE VP + + +LT D L L V+QIK VR+L A
Sbjct: 57 KNLCSKTIGEKMKKKEPVG-DDESVPENVLS-FDDLTADALANLKVSQIKKVRLLIDEAI 114
Query: 432 SKXDEGLLAAEKARSAALREVGNHL 506
K D + E R LRE+GN L
Sbjct: 115 LKCDAERIKLEAERFENLREIGNLL 139
>AK222677-1|BAD96397.1| 514|Homo sapiens seryl-tRNA synthetase
variant protein.
Length = 514
Score = 84.2 bits (199), Expect = 4e-16
Identities = 41/74 (55%), Positives = 51/74 (68%)
Frame = +1
Query: 85 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKMYV 264
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN NKLK
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 265 AKKLV*K*RTRNPV 306
+K + K + + PV
Sbjct: 61 SKTIGEKMKKKEPV 74
Score = 83.4 bits (197), Expect = 7e-16
Identities = 37/57 (64%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Frame = +2
Query: 512 SVPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKG 679
SVP+ +DED N VER GDC RKKYSHVDL+ M+DG +GE+G+ VAG RGY+LKG
Sbjct: 142 SVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKG 198
Score = 66.9 bits (156), Expect = 6e-11
Identities = 40/85 (47%), Positives = 50/85 (58%)
Frame = +3
Query: 252 ENVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKXVRVLXXNAX 431
+N+CSK IG KMK KEP G +DE VP + + +LT D L L V+QIK VR+L A
Sbjct: 57 KNLCSKTIGEKMKKKEPVG-DDESVPENVLS-FDDLTADALANLKVSQIKKVRLLIDEAI 114
Query: 432 SKXDEGLLAAEKARSAALREVGNHL 506
K D + E R LRE+GN L
Sbjct: 115 LKCDAERIKLEAERFENLREIGNLL 139
>X91257-1|CAA62635.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 83.4 bits (197), Expect = 7e-16
Identities = 37/57 (64%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Frame = +2
Query: 512 SVPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKG 679
SVP+ +DED N VER GDC RKKYSHVDL+ M+DG +GE+G+ VAG RGY+LKG
Sbjct: 142 SVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKG 198
Score = 82.2 bits (194), Expect = 2e-15
Identities = 40/74 (54%), Positives = 51/74 (68%)
Frame = +1
Query: 85 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKMYV 264
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN +KLK
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLSKLKNLC 60
Query: 265 AKKLV*K*RTRNPV 306
+K + K + + PV
Sbjct: 61 SKTIGEKMKKKEPV 74
Score = 66.9 bits (156), Expect = 6e-11
Identities = 40/85 (47%), Positives = 50/85 (58%)
Frame = +3
Query: 252 ENVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKXVRVLXXNAX 431
+N+CSK IG KMK KEP G +DE VP + + +LT D L L V+QIK VR+L A
Sbjct: 57 KNLCSKTIGEKMKKKEPVG-DDESVPENVLS-FDDLTADALANLKVSQIKKVRLLIDEAI 114
Query: 432 SKXDEGLLAAEKARSAALREVGNHL 506
K D + E R LRE+GN L
Sbjct: 115 LKCDAERIKLEAERFENLREIGNLL 139
>AF275150-1|AAF91411.1| 1115|Homo sapiens transmembrane-type protein
tyrosine phosphatase H protein.
Length = 1115
Score = 32.7 bits (71), Expect = 1.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 500 SSAESVPVDDDEDHNLVERTDGDCGFRKKYSHVDLI 607
SS +P +D DH D +CGF KY + L+
Sbjct: 795 SSPGDIPAEDFADHVRKNERDSNCGFADKYQQLSLV 830
>M81750-1|AAA69696.1| 407|Homo sapiens myeloid cell nuclear
differentiation antigen protein.
Length = 407
Score = 31.9 bits (69), Expect = 2.2
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 85 MVLDLDLF-RADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKMY 261
+ DL L + ++ N KI + +K+F+ VA +D ++E L++ +N K K
Sbjct: 29 LAYDLGLTTKMQEEYNRIKITDLMEKKFQGVACLDKLIELAKDMPSLKNLVNNLRKEKSK 88
Query: 262 VAKKL 276
VAKK+
Sbjct: 89 VAKKI 93
>BC032319-1|AAH32319.1| 407|Homo sapiens myeloid cell nuclear
differentiation antigen protein.
Length = 407
Score = 31.9 bits (69), Expect = 2.2
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 85 MVLDLDLF-RADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKMY 261
+ DL L + ++ N KI + +K+F+ VA +D ++E L++ +N K K
Sbjct: 29 LAYDLGLTTKMQEEYNRIKITDLMEKKFQGVACLDKLIELAKDMPSLKNLVNNLRKEKSK 88
Query: 262 VAKKL 276
VAKK+
Sbjct: 89 VAKKI 93
>BC020715-1|AAH20715.1| 310|Homo sapiens Unknown (protein for
IMAGE:4717988) protein.
Length = 310
Score = 31.9 bits (69), Expect = 2.2
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 85 MVLDLDLF-RADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKMY 261
+ DL L + ++ N KI + +K+F+ VA +D ++E L++ +N K K
Sbjct: 29 LAYDLGLTTKMQEEYNRIKITDLMEKKFQGVACLDKLIELAKDMPSLKNLVNNLRKEKSK 88
Query: 262 VAKKL 276
VAKK+
Sbjct: 89 VAKKI 93
>AL513205-11|CAH73796.1| 407|Homo sapiens myeloid cell nuclear
differentiation antigen protein.
Length = 407
Score = 31.9 bits (69), Expect = 2.2
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 85 MVLDLDLF-RADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKMY 261
+ DL L + ++ N KI + +K+F+ VA +D ++E L++ +N K K
Sbjct: 29 LAYDLGLTTKMQEEYNRIKITDLMEKKFQGVACLDKLIELAKDMPSLKNLVNNLRKEKSK 88
Query: 262 VAKKL 276
VAKK+
Sbjct: 89 VAKKI 93
>D15049-1|BAA03645.2| 1117|Homo sapiens protein tyrosine phosphatase
precursor protein.
Length = 1117
Score = 31.1 bits (67), Expect = 3.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 500 SSAESVPVDDDEDHNLVERTDGDCGFRKKYSHVDLI 607
SS +P +D DH D +CGF +Y + L+
Sbjct: 797 SSPGDIPAEDFADHVRKNERDSNCGFADEYQQLSLV 832
>BC111716-1|AAI11717.1| 1115|Homo sapiens protein tyrosine
phosphatase, receptor type, H, precursor protein.
Length = 1115
Score = 31.1 bits (67), Expect = 3.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 500 SSAESVPVDDDEDHNLVERTDGDCGFRKKYSHVDLI 607
SS +P +D DH D +CGF +Y + L+
Sbjct: 795 SSPGDIPAEDFADHVRKNERDSNCGFADEYQQLSLV 830
>BC111715-1|AAI11716.1| 937|Homo sapiens PTPRH protein protein.
Length = 937
Score = 31.1 bits (67), Expect = 3.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 500 SSAESVPVDDDEDHNLVERTDGDCGFRKKYSHVDLI 607
SS +P +D DH D +CGF +Y + L+
Sbjct: 617 SSPGDIPAEDFADHVRKNERDSNCGFADEYQQLSLV 652
>BC146797-1|AAI46798.1| 754|Homo sapiens nibrin protein.
Length = 754
Score = 30.3 bits (65), Expect = 6.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 112 ADKDGNPDKIRENQKKRFKDVALVDAVVEQ 201
A K +K+R N+K+ DVA+ D V+EQ
Sbjct: 536 ASKSHAAEKLRSNKKREMDDVAIEDEVLEQ 565
>AY566246-1|AAS59158.1| 754|Homo sapiens Nijmegen breakage syndrome
1 (nibrin) protein.
Length = 754
Score = 30.3 bits (65), Expect = 6.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 112 ADKDGNPDKIRENQKKRFKDVALVDAVVEQ 201
A K +K+R N+K+ DVA+ D V+EQ
Sbjct: 536 ASKSHAAEKLRSNKKREMDDVAIEDEVLEQ 565
>AK223256-1|BAD96976.1| 754|Homo sapiens nibrin variant protein.
Length = 754
Score = 30.3 bits (65), Expect = 6.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 112 ADKDGNPDKIRENQKKRFKDVALVDAVVEQ 201
A K +K+R N+K+ DVA+ D V+EQ
Sbjct: 536 ASKSHAAEKLRSNKKREMDDVAIEDEVLEQ 565
>AF069291-2|AAC62232.1| 754|Homo sapiens nibrin protein.
Length = 754
Score = 30.3 bits (65), Expect = 6.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 112 ADKDGNPDKIRENQKKRFKDVALVDAVVEQ 201
A K +K+R N+K+ DVA+ D V+EQ
Sbjct: 536 ASKSHAAEKLRSNKKREMDDVAIEDEVLEQ 565
>AF058696-1|AAC39752.1| 754|Homo sapiens cell cycle regulatory
protein p95 protein.
Length = 754
Score = 30.3 bits (65), Expect = 6.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 112 ADKDGNPDKIRENQKKRFKDVALVDAVVEQ 201
A K +K+R N+K+ DVA+ D V+EQ
Sbjct: 536 ASKSHAAEKLRSNKKREMDDVAIEDEVLEQ 565
>AF051334-1|AAC39732.1| 754|Homo sapiens nibrin protein.
Length = 754
Score = 30.3 bits (65), Expect = 6.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 112 ADKDGNPDKIRENQKKRFKDVALVDAVVEQ 201
A K +K+R N+K+ DVA+ D V+EQ
Sbjct: 536 ASKSHAAEKLRSNKKREMDDVAIEDEVLEQ 565
>AB013139-1|BAA28616.1| 754|Homo sapiens NBS1 protein.
Length = 754
Score = 30.3 bits (65), Expect = 6.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 112 ADKDGNPDKIRENQKKRFKDVALVDAVVEQ 201
A K +K+R N+K+ DVA+ D V+EQ
Sbjct: 536 ASKSHAAEKLRSNKKREMDDVAIEDEVLEQ 565
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,935,979
Number of Sequences: 237096
Number of extensions: 1744806
Number of successful extensions: 4385
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4377
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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