Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0914
         (692 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68882-1|CAA93105.1|  487|Caenorhabditis elegans Hypothetical pr...    87   1e-17
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr...    32   0.45 
Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical pr...    31   1.0  
AC024796-11|AAK29890.2|  828|Caenorhabditis elegans Hypothetical...    29   4.2  
Z99278-4|CAB16492.1|  871|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z99278-3|CAB16493.1|  867|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z75710-9|CAB00024.2|  752|Caenorhabditis elegans Hypothetical pr...    28   7.3  
U41029-1|AAF99951.1|  479|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>Z68882-1|CAA93105.1|  487|Caenorhabditis elegans Hypothetical
           protein C47E12.1 protein.
          Length = 487

 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 38/57 (66%), Positives = 45/57 (78%)
 Frame = +2

Query: 512 SVPVDDDEDHNLVERTDGDCGFRKKYSHVDLICMIDGMDGERGSAVAGGRGYYLKGP 682
           SV V  DE +N +ERT GD   +KKYSHVDL+ M+DG DGERG+ VAGGRGY+LKGP
Sbjct: 143 SVVVSKDEANNKIERTFGDLSTKKKYSHVDLVVMVDGFDGERGTVVAGGRGYFLKGP 199



 Score = 74.9 bits (176), Expect = 5e-14
 Identities = 35/73 (47%), Positives = 49/73 (67%)
 Frame = +1

Query: 85  MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKMYV 264
           MVLD+D+FR +K GNP+ IR++Q+ RFKD  LVD V+E D  WRK R  AD  N+ K  +
Sbjct: 1   MVLDIDMFRTEKGGNPEIIRKSQQDRFKDPKLVDEVIELDEKWRKERFVADQLNRQKNAI 60

Query: 265 AKKLV*K*RTRNP 303
           +K +  K + + P
Sbjct: 61  SKAIGEKMKKKEP 73



 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 35/87 (40%), Positives = 47/87 (54%)
 Frame = +3

Query: 252 ENVCSKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKXVRVLXXNAX 431
           +N  SK IG KMK KEP G++D  V  +I   L  L  D L  LTV Q+K +RVL     
Sbjct: 57  KNAISKAIGEKMKKKEPQGTDDS-VADDIVARLAELKIDELSQLTVVQLKKLRVLVDEKS 115

Query: 432 SKXDEGLLAAEKARSAALREVGNHLQS 512
            +    ++A E AR   L ++GN + S
Sbjct: 116 VQTAAAVIANENARHEKLIQIGNLIHS 142


>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical
           protein F45E4.4 protein.
          Length = 2361

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 220 LRHEADNFNKLKMYVAKKLV*K*RTRNPVALKTNPSPRRSP 342
           +RHE  ++     + + K     R R+ +A+ TNPSP  SP
Sbjct: 1   MRHEEQSYGLFSFFTSSKRSVSDRPRSALAMFTNPSPSASP 41


>Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical protein
            ZC434.5 protein.
          Length = 1149

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 14/45 (31%), Positives = 29/45 (64%)
 Frame = +3

Query: 207  LVEEIAPRS*QFQ*TENVCSKEIGLKMKNKEPSGSEDEPVPSEIA 341
            LV E+  +  + Q T++  +K + LK + K+ +GS+ +P P+++A
Sbjct: 1027 LVRELKMKDAKSQETKDAIAKLLQLKKQYKDATGSDYKPAPAQLA 1071


>AC024796-11|AAK29890.2|  828|Caenorhabditis elegans Hypothetical
           protein Y48G1C.8 protein.
          Length = 828

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 324 VPSEIANNLVNLTGDNLKPLTVN 392
           VP+    N +N TGD L P TVN
Sbjct: 444 VPANFVANQINHTGDGLSPWTVN 466


>Z99278-4|CAB16492.1|  871|Caenorhabditis elegans Hypothetical
           protein Y53C12B.3b protein.
          Length = 871

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 112 ADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADN 240
           + K  +P +I ++Q     DV   D +VEQD    K RH ++N
Sbjct: 767 SQKPIDPQEISDDQDDTVPDVP--DQIVEQDNQSHKSRHNSEN 807


>Z99278-3|CAB16493.1|  867|Caenorhabditis elegans Hypothetical
           protein Y53C12B.3a protein.
          Length = 867

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 112 ADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADN 240
           + K  +P +I ++Q     DV   D +VEQD    K RH ++N
Sbjct: 764 SQKPIDPQEISDDQDDTVPDVP--DQIVEQDNQSHKSRHNSEN 804


>Z75710-9|CAB00024.2|  752|Caenorhabditis elegans Hypothetical
           protein D1081.3 protein.
          Length = 752

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 151 DFLEFYLDYRLYRHEISLSRGPC 83
           DF E+Y D R Y +EI    G C
Sbjct: 206 DFYEYYFDLRRYNNEICAFSGVC 228


>U41029-1|AAF99951.1|  479|Caenorhabditis elegans Hypothetical
           protein F47G3.3 protein.
          Length = 479

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/43 (25%), Positives = 25/43 (58%)
 Frame = +1

Query: 52  VIYLS*INNVNMVLDLDLFRADKDGNPDKIRENQKKRFKDVAL 180
           V+Y+  +  +N+  +L+LF A+K  +P + ++     +K+  L
Sbjct: 163 VMYIKYLQQMNLHAELELFAAEKIAHPHEYQQEGSSYWKEECL 205


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,676,106
Number of Sequences: 27780
Number of extensions: 293190
Number of successful extensions: 944
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)