Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0913
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.4  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   4.6  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   4.6  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   4.6  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   6.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 325 VFEIRKLRSIFFFFCI 278
           VF+   LR I++F+C+
Sbjct: 47  VFKCYNLRRIYYFYCV 62


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -2

Query: 132 YKLIPTVLRNIESRLIF--KLFLFV*YVNVILKVNLIFFKVFF 10
           Y L    L+++ + L+   K+FLF  Y N+ +   +  FK  F
Sbjct: 61  YWLQDDALKSVYASLLCTEKIFLFAIYTNLSILTTVTIFKSAF 103


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 458 SQYCCYMKFLYCTILHK 408
           S YC ++ F++C   H+
Sbjct: 289 STYCLFLLFVFCDCSHQ 305


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 458 SQYCCYMKFLYCTILHK 408
           S YC ++ F++C   H+
Sbjct: 289 STYCLFLLFVFCDCSHQ 305


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 458 SQYCCYMKFLYCTILHK 408
           S YC ++ F++C   H+
Sbjct: 289 STYCLFLLFVFCDCSHQ 305


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 668 GDKFANLLNHQY 633
           GD+F N LNH +
Sbjct: 398 GDQFYNFLNHNF 409


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 622 LSKMYWWFNKFANLSPKYFIKSV 690
           L  + WW N  +  SP  FIK +
Sbjct: 262 LVSLGWWENYISRHSPIPFIKKL 284


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 622 LSKMYWWFNKFANLSPKYFIKSV 690
           L  + WW N  +  SP  FIK +
Sbjct: 262 LVSLGWWENYISRHSPIPFIKKL 284


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 622 LSKMYWWFNKFANLSPKYFIKSV 690
           L  + WW N  +  SP  FIK +
Sbjct: 262 LVSLGWWENYISRHSPIPFIKKL 284


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 622 LSKMYWWFNKFANLSPKYFIKSV 690
           L  + WW N  +  SP  FIK +
Sbjct: 262 LVSLGWWENYISRHSPIPFIKKL 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,209
Number of Sequences: 336
Number of extensions: 3846
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)