Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0913
         (751 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81147-2|CAB03532.1|  372|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z67990-6|CAA91937.1|  199|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z81147-2|CAB03532.1|  372|Caenorhabditis elegans Hypothetical
           protein T09E11.2 protein.
          Length = 372

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
 Frame = -3

Query: 398 LDVQTLLIFIYKITKFLIT*KLTDCFRDSKIEVNIFFFLYI*ACLLWKEAY---KAARSA 228
           L+ +  L F   + KF+   K T  F  S+ ++NIF      A  +WK  Y     A   
Sbjct: 264 LETENNLNFDINLKKFIEQVKSTLLFSFSQFKLNIFELAAFKAICIWKLIYHETSRAMKI 323

Query: 227 IPLSHYAEAMSANR 186
           I   HY    SA R
Sbjct: 324 IAQEHYDGVASALR 337


>Z67990-6|CAA91937.1|  199|Caenorhabditis elegans Hypothetical
           protein F02D10.6 protein.
          Length = 199

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -3

Query: 338 KLTDCFRDSKIEVNIFFFLYI*ACLLW 258
           KL +  R+SK+E+ + FFL +   ++W
Sbjct: 7   KLPEISRESKMEITLLFFLTVEMVIVW 33


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,456,406
Number of Sequences: 27780
Number of extensions: 326100
Number of successful extensions: 720
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)