Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0912
(546 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 140 9e-34
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 138 3e-33
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 134 4e-32
11_08_0094 - 28314681-28314747,28315264-28315353,28315589-283157... 31 0.79
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 31 0.79
05_01_0508 + 4242705-4242886,4243129-4243234,4246179-4246517 29 1.8
04_04_1108 + 30961600-30962013,30963131-30964465 29 2.4
09_06_0320 - 22297579-22297760,22298433-22299358,22299422-222997... 28 4.2
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 27 7.4
11_06_0027 + 19363678-19363698,19364442-19364484,19366240-193662... 27 7.4
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 27 7.4
09_06_0319 - 22293869-22293906,22294539-22295808 27 7.4
06_02_0084 - 11547820-11548773 27 7.4
02_05_0844 - 32144417-32144764,32145588-32145686,32146218-321464... 27 7.4
10_08_1022 + 22337332-22339398 27 9.8
05_01_0378 + 2970528-2971008,2971961-2972036,2972108-2972253,297... 27 9.8
>11_01_0740 +
6243517-6243526,6244822-6245323,6245415-6245496,
6245741-6245821
Length = 224
Score = 140 bits (338), Expect = 9e-34
Identities = 66/97 (68%), Positives = 77/97 (79%)
Frame = +3
Query: 255 LVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPI 434
+ KN GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ +
Sbjct: 76 MTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVL 135
Query: 435 MSVRSSDRWKAQVIEALRRAKFKFPDVKKIYVSKEVG 545
+SVR + EALRRAKFKFP +KI S++ G
Sbjct: 136 LSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWG 172
Score = 132 bits (320), Expect = 1e-31
Identities = 59/80 (73%), Positives = 66/80 (82%)
Frame = +1
Query: 31 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 210
MGRRPARCYR KNKPYPKSR+CRGVPDPKIRI+D+G K+ VD+FP CVHLVS E E +
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 211 SSEALEAGRICCNKYS*RTA 270
SSEALEA RI CNKY + A
Sbjct: 61 SSEALEAARIACNKYMTKNA 80
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 138 bits (334), Expect = 3e-33
Identities = 65/97 (67%), Positives = 76/97 (78%)
Frame = +3
Query: 255 LVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPI 434
+ K+ GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ +
Sbjct: 72 MTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVL 131
Query: 435 MSVRSSDRWKAQVIEALRRAKFKFPDVKKIYVSKEVG 545
+SVR EALRRAKFKFP +KI S++ G
Sbjct: 132 LSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWG 168
Score = 113 bits (271), Expect = 1e-25
Identities = 50/73 (68%), Positives = 59/73 (80%)
Frame = +1
Query: 52 CYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEA 231
CYR KNKPYPKSR+CRGVPDPKIRI+D+G K+ VD+F CVHLVS E E ++SEALEA
Sbjct: 4 CYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEA 63
Query: 232 GRICCNKYS*RTA 270
RI CNKY ++A
Sbjct: 64 ARIACNKYMTKSA 76
>03_02_0897 -
12239375-12239458,12240035-12240116,12240213-12240714,
12241150-12241303,12241458-12241629,12242237-12242443,
12242926-12243323
Length = 532
Score = 134 bits (324), Expect = 4e-32
Identities = 63/97 (64%), Positives = 75/97 (77%)
Frame = +3
Query: 255 LVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPI 434
+ K+ GKD FH+R+ HP+HV+RINKMLSCAGADRLQTGMRGAFGKP GT ARVRIGQ +
Sbjct: 383 MAKHAGKDAFHLRVCAHPYHVLRINKMLSCAGADRLQTGMRGAFGKPTGTCARVRIGQVL 442
Query: 435 MSVRSSDRWKAQVIEALRRAKFKFPDVKKIYVSKEVG 545
+SVR D A EALRRAKFKFP +++ S + G
Sbjct: 443 LSVRCRDANAAHAQEALRRAKFKFPGRQRVIFSAKWG 479
Score = 127 bits (307), Expect = 5e-30
Identities = 55/71 (77%), Positives = 61/71 (85%)
Frame = +1
Query: 43 PARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEA 222
P RCYR KNKPYPKSR+CRGVPDPKIRIFD+G+K+ + DDFPLCVHLVS E E +SSEA
Sbjct: 312 PVRCYRQIKNKPYPKSRYCRGVPDPKIRIFDVGQKKRSADDFPLCVHLVSWEKENVSSEA 371
Query: 223 LEAGRICCNKY 255
LEA RI CNKY
Sbjct: 372 LEAARIACNKY 382
>11_08_0094 -
28314681-28314747,28315264-28315353,28315589-28315725,
28317020-28317589
Length = 287
Score = 30.7 bits (66), Expect = 0.79
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -3
Query: 271 PQFFTSTYCSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRR 128
P+F+T ++C R + L +++ R AR + RQ S SS P+ +
Sbjct: 50 PRFYTCSFCQREFRSAQALGGHMNVHRRDRAR-LRQRQTSSSSSPSHQ 96
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 30.7 bits (66), Expect = 0.79
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -3
Query: 433 MGCPMRTRATVP*GLPNAPRIPVWSLSAPAH 341
+ CP+ + + VP LP++P P++S ++P +
Sbjct: 1625 LSCPLTSPSYVPTSLPHSPTSPIYSATSPIY 1655
>05_01_0508 + 4242705-4242886,4243129-4243234,4246179-4246517
Length = 208
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = -2
Query: 326 DADNVERVKSHADMELILSAVLYEYLLQQIR-----PASKASELSCSYSSDTKCTHSGKS 162
+ DN+ V AD L+++A +++Q + PA+ A+ C+ S TK H G+
Sbjct: 143 NCDNLPVVPLGADQPLVMAACKRAAVIKQQQQASSSPATAAAAAQCAVPSSTKAIHVGEE 202
Query: 161 STVA 150
+ ++
Sbjct: 203 AHIS 206
>04_04_1108 + 30961600-30962013,30963131-30964465
Length = 582
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -3
Query: 271 PQFFTSTYCSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSS 143
P F+ C + PP PL++ V + P+A + S + +++S
Sbjct: 95 PGRFSCPLCGAEIAPPPPLAAVVSVVAPPAAIPITSNRPAMTS 137
>09_06_0320 - 22297579-22297760,22298433-22299358,22299422-22299747,
22300591-22300660,22301632-22301726,22301917-22302048,
22302154-22302222,22302953-22303051,22303169-22303253,
22303353-22303453,22303660-22303728,22303861-22303901,
22304085-22304303,22304444-22304470,22304562-22304660,
22304898-22305106,22305382-22305485,22305753-22305894,
22305991-22306289,22306508-22306903
Length = 1229
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 387 GKPQGTVARVRIGQPIMSVRSSD 455
G PQ T+ R+ +G P +S++S+D
Sbjct: 1089 GTPQQTLERLHVGHPTLSLQSND 1111
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 27.5 bits (58), Expect = 7.4
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = -3
Query: 286 WN*SFPQFFTSTYCS-RYVLPPKPLSSAVHIRRTP--SARTVESRQR--SLSSYPNRRYG 122
W+ + P F + R LP PLS + +P S R + SR R SLS P+RR
Sbjct: 257 WHSNVPGFSHDAPANLRTSLPDHPLSHSRGGSPSPPISGRDMGSRGRRQSLSPTPSRRAS 316
Query: 121 SWDQVHPDRTSISDTVYFCSTGSISL 44
S + DR S S+G L
Sbjct: 317 SSHSIERDRLSSYSKASATSSGEDDL 342
>11_06_0027 +
19363678-19363698,19364442-19364484,19366240-19366276,
19366359-19366602,19366749-19366765,19366901-19366986,
19367347-19367378,19367455-19367615,19367722-19367818,
19367894-19368085,19368172-19368233,19368302-19368448,
19368776-19369589
Length = 650
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = -2
Query: 521 LFDVRELELGTAQSLDDLCLPPVTRAHGHDGLSNANTCYSTLRLAKRTT 375
+F++ E A +L+D CL + + HD LS +C + + + T
Sbjct: 179 MFNIPHREQVVAATLED-CLDHIVEENVHDSLSRCESCMNDQKSTSKCT 226
>10_08_0141 +
15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 154 TVDDFPLC-VHLVSDEYEQLSSEALEAGRICC 246
T D P C +HL SD Y S E ++AG+ C
Sbjct: 587 TTDWNPRCDIHLKSDGYTNYSLETVQAGKQQC 618
>09_06_0319 - 22293869-22293906,22294539-22295808
Length = 435
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 387 GKPQGTVARVRIGQPIMSVRSSD 455
G PQ T+ R+ +G P +S+ S D
Sbjct: 343 GTPQPTLERLHVGHPTLSLHSDD 365
>06_02_0084 - 11547820-11548773
Length = 317
Score = 27.5 bits (58), Expect = 7.4
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +3
Query: 336 LSCAGADRLQTGMRGAFGK--PQGTVARVRIGQPIMSVRSSDRWK 464
L G DR Q GMRGA P RVR +P R +W+
Sbjct: 133 LGAGGGDRGQLGMRGAADGWWPDWRERRVRWRRPAWRERRGRQWR 177
>02_05_0844 -
32144417-32144764,32145588-32145686,32146218-32146410,
32147049-32147107,32147189-32147263,32147557-32147670,
32147776-32147895,32148204-32148216,32148421-32148512,
32149078-32149164,32149254-32149328,32149630-32149680,
32149852-32149947,32150135-32150221,32150312-32150368,
32150475-32150600,32150709-32150949,32151028-32151114,
32151260-32151637,32152847-32153187
Length = 912
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -3
Query: 172 VESRQRSLSSYPNRRYGSWDQVHPDRTSISDTVYFCSTG 56
+ S + + S GSW H D +++ DT+ CS+G
Sbjct: 758 MNSSNQQIGSPSEEDLGSWGH-HSDPSTVPDTILQCSSG 795
>10_08_1022 + 22337332-22339398
Length = 688
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -1
Query: 138 QIEDTDLGIRYTPTEPRFRIRFIFAVPVASRWPAPHGDLYKVTP 7
++ TD+ + + PR R F + AS WP PH D P
Sbjct: 216 ELGSTDVIFQTGDSIPRIRALFNLSAAAASSWP-PHPDAASADP 258
>05_01_0378 +
2970528-2971008,2971961-2972036,2972108-2972253,
2972300-2972817
Length = 406
Score = 27.1 bits (57), Expect = 9.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 332 NVIMRWS**APDWDAWCVWQASGYCSTCSHWT 427
NV+ RW P AWC + S + CS W+
Sbjct: 342 NVLGRWGH-GPVPGAWCSGRKSWFSDPCSQWS 372
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,413,309
Number of Sequences: 37544
Number of extensions: 404966
Number of successful extensions: 1133
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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