Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0912
(546 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical pr... 140 6e-34
AF016450-13|AAB65988.2| 472|Caenorhabditis elegans Hypothetical... 29 1.7
Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical pr... 28 3.8
AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like pro... 28 3.8
AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical ... 28 3.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 27 6.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 27 6.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 27 6.7
>Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical
protein F10B5.1 protein.
Length = 214
Score = 140 bits (339), Expect = 6e-34
Identities = 62/75 (82%), Positives = 65/75 (86%)
Frame = +1
Query: 31 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 210
MGRRPARCYRY KNKPYPKSRFCRGVPD KIRIFDLG KRA VD FP CVH++S+E E L
Sbjct: 1 MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHL 60
Query: 211 SSEALEAGRICCNKY 255
SSEALEA RIC NKY
Sbjct: 61 SSEALEAARICANKY 75
Score = 133 bits (322), Expect = 7e-32
Identities = 64/97 (65%), Positives = 74/97 (76%)
Frame = +3
Query: 255 LVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPI 434
+VKNCGKD FH+R+R HPFHV RINKMLSCAGADRLQTGMRGA+GKPQG VARV IG +
Sbjct: 76 MVKNCGKDGFHLRVRKHPFHVTRINKMLSCAGADRLQTGMRGAYGKPQGLVARVDIGDIL 135
Query: 435 MSVRSSDRWKAQVIEALRRAKFKFPDVKKIYVSKEVG 545
S+R + IEA RRAKFKFP + I S++ G
Sbjct: 136 FSMRIKEGNVKHAIEAFRRAKFKFPGRQIIVSSRKWG 172
>AF016450-13|AAB65988.2| 472|Caenorhabditis elegans Hypothetical
protein B0238.9 protein.
Length = 472
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/68 (20%), Positives = 32/68 (47%)
Frame = +2
Query: 71 INRIRNRGSVGVYLIPRSVSSIWVRRERPLTTFHCACTWCPTNMNS*AQRLWRQDVSAAI 250
+ R+ + GS + +P+ +++W R+ + L C C M Q L+ ++ +
Sbjct: 82 VKRLASLGSARGWTVPQRRNNLWERKGQSLIGKFCRCRCDRGQMTRDKQALYEKEKAVEK 141
Query: 251 STRKELRK 274
+K+ +K
Sbjct: 142 EKKKKAKK 149
>Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical
protein F07A11.6d protein.
Length = 567
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -2
Query: 464 LPPVTRAHGHDGLSNANTCYSTLRLAKRTTHPSLEPISSSA 342
+P VT A + LSN T ST LA T +L P+S A
Sbjct: 46 VPVVTTASTPNPLSNLETLLSTASLANLATGGALNPLSMLA 86
>Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical
protein C09G5.2 protein.
Length = 476
Score = 28.3 bits (60), Expect = 3.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 394 GLPNAPRIPVWSLSAPA 344
G PN+P +P+W LS P+
Sbjct: 232 GFPNSPLLPIWLLSYPS 248
>AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like
protein 2 protein.
Length = 205
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 91 RFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGR 237
R C + K I D K+ A ++ + +++ EYEQ++S +AG+
Sbjct: 93 RACDFMSQLKTDISDADKQLAQLNAQAAALEMIASEYEQMASSVPDAGQ 141
>AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical
protein D1007.15 protein.
Length = 1184
Score = 28.3 bits (60), Expect = 3.8
Identities = 24/73 (32%), Positives = 35/73 (47%)
Frame = -1
Query: 276 PFRSSLRVLIAADTSCLQSL*AQLFIFVGHQVHAQWKVVNGRSLLTQIEDTDLGIRYTPT 97
P ++ L ++AD S LQ QL + H V + + +LL I T + Y+
Sbjct: 226 PIKNHLETALSADDSPLQ-FDYQLQYMI-HNVFEHYVIPV--ALLCSILGTIVRFCYSDD 281
Query: 96 EPRFRIRFIFAVP 58
E F RF+FAVP
Sbjct: 282 ENLFGTRFVFAVP 294
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -1
Query: 153 RSLLTQIED--TDLGIRYTPTEPRFRIRFIFAVPVA 52
RS + IE +D+ + TP +P+ +F+F VPVA
Sbjct: 593 RSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVA 628
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -1
Query: 153 RSLLTQIED--TDLGIRYTPTEPRFRIRFIFAVPVA 52
RS + IE +D+ + TP +P+ +F+F VPVA
Sbjct: 593 RSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVA 628
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -1
Query: 153 RSLLTQIED--TDLGIRYTPTEPRFRIRFIFAVPVA 52
RS + IE +D+ + TP +P+ +F+F VPVA
Sbjct: 176 RSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVA 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,060,683
Number of Sequences: 27780
Number of extensions: 317378
Number of successful extensions: 900
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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