Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0911
(614 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943... 37 0.011
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 37 0.015
07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177... 35 0.059
10_08_0412 - 17729765-17730283,17731256-17731726 29 2.9
12_02_0269 - 16617292-16618852,16622763-16623562 29 3.9
07_03_1304 - 25629822-25629839,25630091-25631148,25631784-256349... 29 3.9
06_01_0257 - 1908922-1909283,1909828-1909924,1910695-1910786,191... 28 5.1
08_02_0769 - 21012521-21013331,21013692-21013821,21013915-21014047 28 6.8
01_01_0498 - 3666752-3667072,3667670-3668061,3668571-3668912,366... 28 6.8
10_08_0858 - 21108283-21108387,21108820-21108889,21109490-211096... 27 8.9
09_04_0493 - 18046553-18046990,18047061-18047180,18047290-180474... 27 8.9
09_04_0241 + 15962439-15962795,15962809-15963102 27 8.9
08_02_0421 - 16932354-16932427,16932909-16933076,16933443-16934544 27 8.9
04_03_0890 + 20576843-20578119,20578563-20578806,20578890-20580002 27 8.9
02_05_0659 + 30679809-30680253,30680699-30680715,30682373-306825... 27 8.9
02_01_0085 + 610872-611297 27 8.9
01_06_0358 - 28677781-28677901,28678327-28678430,28678542-286786... 27 8.9
>06_02_0297 -
13891954-13892556,13893019-13893855,13894179-13894394,
13895455-13895874,13896198-13896506
Length = 794
Score = 37.1 bits (82), Expect = 0.011
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Frame = +3
Query: 3 LISDRQYGFRHGHR------WA-----EALESKGEALAVSLDIAKAFDRVWHRALLXKLS 149
L+SD YGF G W + +SK E + + LD KAFD + H A+L +
Sbjct: 416 LVSDNHYGFIKGKTIQDCPAWPFEYIHQCQQSKREIVLLKLDFEKAFDTIEHSAILSVMQ 475
Query: 150 SYGVPEGLCKWI 185
G P +W+
Sbjct: 476 HMGFPLKWIEWV 487
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +3
Query: 66 KGEALAVSLDIAKAFDRVWHRALLXKLSSYGVPEGLCKWIPSFLDGRRS 212
K + L + LD AKAFD V ++L LS G P+ WI + L +S
Sbjct: 33 KCQTLIIKLDFAKAFDSVNWQSLFQILSVKGFPDNWISWIKNLLQTSKS 81
>07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,
1778770-1778900,1779530-1779788,1779823-1780098,
1780100-1781352
Length = 1344
Score = 34.7 bits (76), Expect = 0.059
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +3
Query: 66 KGEALAVSLDIAKAFDRVWHRALLXKLSSYGVPEGLCKWIPSFLDGRRS 212
K + + V LD KAFD V +L L+ G PE WI L +S
Sbjct: 1048 KCQTIIVKLDFTKAFDSVIWSSLFKILAVRGFPENWISWIKGLLSSSKS 1096
>10_08_0412 - 17729765-17730283,17731256-17731726
Length = 329
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -3
Query: 105 PSRYQGSQQEPRPCSPRLQPTCD 37
PSRY+ ++Q+ + C+P TCD
Sbjct: 244 PSRYEINKQQVQQCTPSFTATCD 266
>12_02_0269 - 16617292-16618852,16622763-16623562
Length = 786
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -2
Query: 352 VIRIAMNAINRQNVIDIQDEKRGEEPNLVECQRNVHGIRTVTVYNDR 212
VIR + + R N + + + NL++ ++H +R+V + DR
Sbjct: 514 VIRTDQDCLRRHNFLIRRLSYQSNRGNLIQASESLHQVRSVIYFGDR 560
>07_03_1304 -
25629822-25629839,25630091-25631148,25631784-25634928,
25635454-25636293
Length = 1686
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +2
Query: 338 CYADDSTGNARYIGHQSLSQSVVQERRSKLVSEVENSMG 454
CY D+ N+ ++ HQ S ++ + L+ N MG
Sbjct: 335 CYGDNFVLNSTFLDHQDFSSKIIYTTDNCLLHHCMNDMG 373
>06_01_0257 -
1908922-1909283,1909828-1909924,1910695-1910786,
1910873-1910993,1911672-1911866
Length = 288
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -2
Query: 403 HALRETLMADISRIPRAVIRIAMNAINRQNVIDIQDEKRGEEPNLV 266
+++ LM DI IP A +R AMN IN + + +GE ++
Sbjct: 143 YSIEHILMVDI--IPDAAVRRAMNEINAAQRLQLASVYKGEAEKIL 186
>08_02_0769 - 21012521-21013331,21013692-21013821,21013915-21014047
Length = 357
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 491 FNPDKDQVLRVHCEEGTHLSWRAM 562
+ P++DQ L + EE H SWRA+
Sbjct: 17 WTPEEDQKLLAYIEEHGHGSWRAL 40
>01_01_0498 -
3666752-3667072,3667670-3668061,3668571-3668912,
3669982-3670131,3670211-3670308,3670430-3670489,
3670605-3670676,3670766-3670909,3671003-3671074,
3671170-3671302,3671649-3671751
Length = 628
Score = 27.9 bits (59), Expect = 6.8
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Frame = -1
Query: 593 LGKVXRGYFLALRAMTNGFLLRSERAKLG---LYRG*IKPSSIHPIRRLAP*SS-----P 438
LG + R F LRA TN F ++ + G +Y+G ++ +I ++RL ++
Sbjct: 286 LGHLKRYAFKELRAATNNFNSKNILGEGGYGIVYKGFLRDGAIVAVKRLKDYNAVGGEVQ 345
Query: 437 LQTQVLIVSLA 405
QT+V ++SLA
Sbjct: 346 FQTEVEVISLA 356
>10_08_0858 -
21108283-21108387,21108820-21108889,21109490-21109646,
21109930-21110062,21110409-21110583,21113353-21113453,
21113620-21113706,21115871-21115931,21116114-21116178,
21116534-21117631
Length = 683
Score = 27.5 bits (58), Expect = 8.9
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 203 AEITVVVDGDCPNTMNITLAFHKVRFFPTLFILYINDILSIDGIHCYADDSTGNARYIGH 382
A++ V VD C + ++ A H F + L + SID + D ++ RY+ H
Sbjct: 259 AKVVVSVDRGCDRS-DLPFAAHLFHSFHSAVYL----LESIDAVGTDPDTASKIERYLIH 313
Query: 383 QSLSQSVVQERRS 421
++ Q VV R+
Sbjct: 314 PAIEQCVVASHRA 326
>09_04_0493 -
18046553-18046990,18047061-18047180,18047290-18047478,
18047596-18047739,18048673-18048900,18049659-18049838,
18050304-18050399,18051096-18051262,18051356-18051773,
18052335-18052517,18053846-18053953,18054053-18054246,
18054503-18054662
Length = 874
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 114 CRRPSRYQGSQQEPRPCSPRLQPTCDRDGN 25
C PS +QG +E CS QP ++ N
Sbjct: 308 CDLPSSFQGKVEESEKCSTDTQPELSQEEN 337
>09_04_0241 + 15962439-15962795,15962809-15963102
Length = 216
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 39 HRWAEALESKGEALAVSLDIAKAFDRVWHRALLXKLSSYGVPEG 170
HR+AE+L ++ A+AVS D A + R L ++ G P G
Sbjct: 17 HRYAESLAARAAAVAVSFDYRVAPEHPCARGLRRRVG--GAPVG 58
>08_02_0421 - 16932354-16932427,16932909-16933076,16933443-16934544
Length = 447
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +1
Query: 97 SRRPS--TGSGIGHFCXSYHLTGSP-RVSASGSLAFWMGGDHGRCRR 228
+RRP T +G GH S L + V + S A + GGD+GR RR
Sbjct: 126 ARRPPRLTVAGYGHEVTSISLAAAEVTVLLNASRACYGGGDYGRGRR 172
>04_03_0890 + 20576843-20578119,20578563-20578806,20578890-20580002
Length = 877
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 97 SRRPSTGSGIGHFCXSYHLTGSPRVSASGSLAFWMGG 207
+RR +G G G++C H+ R AS W+ G
Sbjct: 346 ARRVGSGGGGGYYCSVEHVVTEVRALASCDGGIWLVG 382
>02_05_0659 +
30679809-30680253,30680699-30680715,30682373-30682530,
30682570-30682846
Length = 298
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 451 HRVLHFRHKF*SSLLHHALRETLMADISRIPRA 353
HRV R+KF S+L + + E L + RIP A
Sbjct: 162 HRVERKRNKFWVSVLANFVEELLYVPVDRIPHA 194
>02_01_0085 + 610872-611297
Length = 141
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -3
Query: 138 TEVPYARPCRRPSRYQGSQQEPRPCSPRLQPTCDRDGN 25
T P +R R S RP SPR QP C N
Sbjct: 96 TSCPPSRQISDRGRAAASPARSRPSSPRPQPCCAESAN 133
>01_06_0358 -
28677781-28677901,28678327-28678430,28678542-28678625,
28679221-28679265,28679523-28679594,28679721-28679759,
28679966-28680061,28680492-28680566,28681717-28681764,
28681888-28681971,28682141-28682341,28682394-28682561,
28683232-28683372,28683470-28683517,28683845-28684087,
28684184-28684297,28685134-28685163,28685361-28685951,
28686033-28686620,28686744-28686863,28687764-28687938,
28688397-28688562,28688653-28688755,28689227-28689319,
28690759-28690918,28691754-28691872
Length = 1275
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -3
Query: 306 IYRMKSVGKNRTLWNASVMFMVLGQSPSTTTVISAHPKS 190
I + ++ KNR ++ ++ ++LG PS AHP S
Sbjct: 212 INSLAAIAKNRPVYYERILPVLLGFDPSLEVAKGAHPAS 250
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,666,966
Number of Sequences: 37544
Number of extensions: 430397
Number of successful extensions: 1180
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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