Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0911
(614 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 47 2e-05
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 47 2e-05
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 45 9e-05
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 45 9e-05
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 45 9e-05
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 45 9e-05
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 45 9e-05
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 45 9e-05
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 45 9e-05
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 44 2e-04
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 43 3e-04
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 43 3e-04
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 43 3e-04
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 43 3e-04
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 43 3e-04
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 43 3e-04
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 42 5e-04
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 42 9e-04
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 40 0.004
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 38 0.008
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 37 0.019
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 36 0.033
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 36 0.043
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 36 0.043
BT029132-1|ABJ17065.1| 1335|Drosophila melanogaster IP16240p pro... 31 1.2
AE014297-3565|AAF56311.1| 1729|Drosophila melanogaster CG6631-PA... 31 1.2
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +3
Query: 51 EALESKGEALAVSLDIAKAFDRVWHRALLXKLSSYGVPEGLCKWIPSFLDGR 206
E+++SK V+LDI AFD VWH LL KL G P L K + +FL R
Sbjct: 595 ESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHR 646
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +3
Query: 51 EALESKGEALAVSLDIAKAFDRVWHRALLXKLSSYGVPEGLCKWIPSFLDGR 206
E+++SK V+LDI AFD VWH LL KL G P L K + +FL R
Sbjct: 543 ESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHR 594
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 44.8 bits (101), Expect = 9e-05
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +3
Query: 51 EALESKGEALAVSLDIAKAFDRVWHRALLXKLSSYGVPEGLCKWIPSFLDGR 206
EA E K AV LDI++AFDRVWH LL KL+ +P L + S+L R
Sbjct: 615 EAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNR 665
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 44.8 bits (101), Expect = 9e-05
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +3
Query: 51 EALESKGEALAVSLDIAKAFDRVWHRALLXKLSSYGVPEGLCKWIPSFLDGR 206
EA E K AV LDI++AFDRVWH LL KL+ +P L + S+L R
Sbjct: 499 EAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNR 549
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 44.8 bits (101), Expect = 9e-05
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +3
Query: 51 EALESKGEALAVSLDIAKAFDRVWHRALLXKLSSYGVPEGLCKWIPSFLDGR 206
EA E K AV LDI++AFDRVWH LL KL+ +P L + S+L R
Sbjct: 627 EAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNR 677
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 44.8 bits (101), Expect = 9e-05
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +3
Query: 51 EALESKGEALAVSLDIAKAFDRVWHRALLXKLSSYGVPEGLCKWIPSFLDGR 206
EA E K AV LDI++AFDRVWH LL KL+ +P L + S+L R
Sbjct: 615 EAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNR 665
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 44.8 bits (101), Expect = 9e-05
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +3
Query: 51 EALESKGEALAVSLDIAKAFDRVWHRALLXKLSSYGVPEGLCKWIPSFLDGR 206
EA E K AV LDI++AFDRVWH LL KL+ +P L + S+L R
Sbjct: 615 EAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNR 665
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 44.8 bits (101), Expect = 9e-05
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +3
Query: 51 EALESKGEALAVSLDIAKAFDRVWHRALLXKLSSYGVPEGLCKWIPSFLDGR 206
EA E K AV LDI++AFDRVWH LL KL+ +P L + S+L R
Sbjct: 577 EAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNR 627
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 44.8 bits (101), Expect = 9e-05
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +3
Query: 51 EALESKGEALAVSLDIAKAFDRVWHRALLXKLSSYGVPEGLCKWIPSFLDGR 206
EA E K AV LDI++AFDRVWH LL KL+ +P L + S+L R
Sbjct: 615 EAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNR 665
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 44.0 bits (99), Expect = 2e-04
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Frame = +3
Query: 3 LISDRQYGFRHGHRWAE-----------ALESKGEALAVSLDIAKAFDRVWHRALLXKLS 149
++ D Q+GFR GH E A + K AV +D+ +AFDRVWH L+ K+
Sbjct: 544 ILPDHQFGFRQGHSTVEQVHRLTKHILQAFDDKEYCNAVFIDMQQAFDRVWHDGLISKVK 603
Query: 150 SYGVPEGLCKWIPSFLDGRRSRSXXXXXXXIP*TLR 257
P + S+L+ RR IP +R
Sbjct: 604 KL-FPAPYYGVLKSYLEDRRFMVRVRNSYSIPRVMR 638
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 43.2 bits (97), Expect = 3e-04
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +3
Query: 51 EALESKGEALAVSLDIAKAFDRVWHRALLXKLSSYGVPEGLCKWIPSFLDGR 206
EA+E+K A+ LDI +AFDRVWH LL K P+ L + SFL+ R
Sbjct: 572 EAMENKEYAVGAFLDIQQAFDRVWHPGLLYKAKRLFPPQ-LYLVVKSFLEER 622
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 43.2 bits (97), Expect = 3e-04
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +3
Query: 51 EALESKGEALAVSLDIAKAFDRVWHRALLXKLSSYGVPEGLCKWIPSFLDGR 206
EA+E+K A+ LDI +AFDRVWH LL K P+ L + SFL+ R
Sbjct: 374 EAMENKEYAVGAFLDIQQAFDRVWHPGLLYKAKRLFPPQ-LYLVVKSFLEER 424
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 43.2 bits (97), Expect = 3e-04
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Frame = +3
Query: 6 ISDRQYGFR--HG--HRWA-------EALESKGEALAVSLDIAKAFDRVWHRALLXKLSS 152
I Q+GFR HG H+ A +A + K A LDI +AFDRVWH LL KLS
Sbjct: 145 IPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKLSR 204
Query: 153 YGVPEGLCKWIPSFLDGR 206
+P L + ++L R
Sbjct: 205 L-IPRYLFDLLENYLSNR 221
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 43.2 bits (97), Expect = 3e-04
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Frame = +3
Query: 6 ISDRQYGFR--HG--HRWA-------EALESKGEALAVSLDIAKAFDRVWHRALLXKLSS 152
I Q+GFR HG H+ A +A + K A LDI +AFDRVWH LL KLS
Sbjct: 592 IPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKLSR 651
Query: 153 YGVPEGLCKWIPSFLDGR 206
+P L + ++L R
Sbjct: 652 L-IPRYLFDLLENYLSNR 668
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 43.2 bits (97), Expect = 3e-04
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Frame = +3
Query: 6 ISDRQYGFR--HG--HRWA-------EALESKGEALAVSLDIAKAFDRVWHRALLXKLSS 152
I Q+GFR HG H+ A +A + K A LDI +AFDRVWH LL KLS
Sbjct: 592 IPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKLSR 651
Query: 153 YGVPEGLCKWIPSFLDGR 206
+P L + ++L R
Sbjct: 652 L-IPRYLFDLLENYLSNR 668
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 43.2 bits (97), Expect = 3e-04
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Frame = +3
Query: 6 ISDRQYGFR--HG--HRWA-------EALESKGEALAVSLDIAKAFDRVWHRALLXKLSS 152
I Q+GFR HG H+ A +A + K A LDI +AFDRVWH LL KLS
Sbjct: 592 IPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKLSR 651
Query: 153 YGVPEGLCKWIPSFLDGR 206
+P L + ++L R
Sbjct: 652 L-IPRYLFDLLENYLSNR 668
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 42.3 bits (95), Expect = 5e-04
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Frame = +3
Query: 3 LISDRQYGFRHGHRWAEAL--------ESKGEALAVSLDIAKAFDRVWHRALLXKLSSYG 158
LI+D+Q+GF+ G ++ L +SK V+LD ++AFDRV +++ +L +
Sbjct: 538 LINDKQFGFKKGKSTSDCLLYVDYLITKSKMHTSLVTLDFSRAFDRVGVHSIIQQLQEWK 597
Query: 159 VPEGLCKWIPSFLDGRR 209
+ K+I +F+ R+
Sbjct: 598 TGPKIIKYIKNFMSNRK 614
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 41.5 bits (93), Expect = 9e-04
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 11/77 (14%)
Frame = +3
Query: 12 DRQYGFRHGHRWAEAL-----------ESKGEALAVSLDIAKAFDRVWHRALLXKLSSYG 158
+ Q+GFR GH E L +SK ++ LDI +AFDRVWH L K+
Sbjct: 546 EHQFGFRAGHCTVEQLHRVVEQILTAYDSKEYCNSLFLDIREAFDRVWHIGLQLKIKQ-T 604
Query: 159 VPEGLCKWIPSFLDGRR 209
+P + S+L+GRR
Sbjct: 605 LPAPYFGLLKSYLEGRR 621
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +3
Query: 54 ALESKGEALAVSLDIAKAFDRVWHRALLXKLSSYGVPEGLCKWIPSFLDGR 206
A E + A+ LD+A+AFDRVW L+ K+ +P+ + K + S+LD R
Sbjct: 108 AFEHREYCTALFLDVAQAFDRVWLDGLMFKIIQL-LPQNIHKLLKSYLDKR 157
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 38.3 bits (85), Expect = 0.008
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 11/80 (13%)
Frame = +3
Query: 3 LISDRQYGFRHGHRWAE-----------ALESKGEALAVSLDIAKAFDRVWHRALLXKLS 149
+I Q+GFR H E A E + AV LD+++AFD+VW L+ K+
Sbjct: 541 IIPAHQFGFRESHGTIEQVNRITTEIRTAFEYREYCTAVFLDVSQAFDKVWLDGLMFKI- 599
Query: 150 SYGVPEGLCKWIPSFLDGRR 209
+PE K + S+L R+
Sbjct: 600 KISLPESTHKLLKSYLYDRK 619
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 37.1 bits (82), Expect = 0.019
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +3
Query: 54 ALESKGEALAVSLDIAKAFDRVWHRALLXKLSSYGVPEGLCKWIPSFLDGR 206
A E + A+ LD+A+AFDRVW LL K+ +P+ K + S+L R
Sbjct: 567 AFEHREYCTAIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNR 616
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 36.3 bits (80), Expect = 0.033
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +3
Query: 54 ALESKGEALAVSLDIAKAFDRVWHRALLXKLSSYGVPEGLCKWIPSFL 197
A E + A+ LD+A+AFDRVW LL K+ +P+ K + S+L
Sbjct: 567 AFEHREYCTAIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYL 613
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 35.9 bits (79), Expect = 0.043
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +3
Query: 87 SLDIAKAFDRVWHRALLXKLSSYGVPEGLCKWIPSFLDG 203
+LD++KAFD + H ++ L +YG P+G ++ + +G
Sbjct: 480 NLDVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEG 518
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 35.9 bits (79), Expect = 0.043
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3
Query: 39 HRWAEALESKGEALAVSLDIAKAFDRVWHRALLXKLSSYGVPEGLCKWIPSFLDGRRSR 215
H + AL +K ++ D +AFDRV A+L +L +G+ L I +F+ R R
Sbjct: 566 HFASNALSTKNHVSILATDFERAFDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFR 624
>BT029132-1|ABJ17065.1| 1335|Drosophila melanogaster IP16240p
protein.
Length = 1335
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -3
Query: 219 TTVISAHPKS*GSTCRDPRGPRKMIASTE-VPYARPCRRPSRYQGSQQEPRPCSPRLQPT 43
T +SA P T PR PRK + E VP P + P++ + +PR QP+
Sbjct: 310 TPPVSAPPSP---TKSPPRSPRKCVEREEPVPAPAPRKSPTKTAKGSPKKTVTAPRNQPS 366
Query: 42 CDRDG 28
R G
Sbjct: 367 VKRTG 371
>AE014297-3565|AAF56311.1| 1729|Drosophila melanogaster CG6631-PA,
isoform A protein.
Length = 1729
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -3
Query: 219 TTVISAHPKS*GSTCRDPRGPRKMIASTE-VPYARPCRRPSRYQGSQQEPRPCSPRLQPT 43
T +SA P T PR PRK + E VP P + P++ + +PR QP+
Sbjct: 310 TPPVSAPPSP---TKSPPRSPRKCVEREEPVPAPAPRKSPTKTAKGSPKKTVTAPRNQPS 366
Query: 42 CDRDG 28
R G
Sbjct: 367 VKRTG 371
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,102,526
Number of Sequences: 53049
Number of extensions: 694074
Number of successful extensions: 1849
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1845
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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