Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0911
(614 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g20120.1 68416.m02551 cytochrome P450 family protein contains... 29 1.9
At2g36470.1 68415.m04476 expressed protein 29 1.9
At2g20960.1 68415.m02479 expressed protein pEARLI 4 gene product... 29 3.2
At5g51570.1 68418.m06394 band 7 family protein similar to hypers... 28 4.3
At5g08660.1 68418.m01031 expressed protein contains Pfam domain ... 28 4.3
At1g70300.1 68414.m08088 potassium transporter, putative similar... 28 4.3
At3g32940.1 68416.m04174 expressed protein 27 7.5
At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11) ide... 27 7.5
At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11) ide... 27 7.5
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 27 9.9
At3g61250.1 68416.m06855 myb family transcription factor (MYB17)... 27 9.9
At3g02150.2 68416.m00185 TCP family transcription factor, putati... 27 9.9
At1g48050.1 68414.m05356 Ku80 family protein identical to Ku80-l... 27 9.9
>At3g20120.1 68416.m02551 cytochrome P450 family protein contains
Pfam profile: PF00067 cytochrome P450
Length = 378
Score = 29.5 bits (63), Expect = 1.9
Identities = 25/96 (26%), Positives = 45/96 (46%)
Frame = -2
Query: 427 KF*SSLLHHALRETLMADISRIPRAVIRIAMNAINRQNVIDIQDEKRGEEPNLVECQRNV 248
+F SSLL A+++ +I I + +++ N++ R ++ EK GE + +
Sbjct: 28 RFHSSLLDKAVKK----EIVEIGKEATKLSNNSLWRMSIGRSFSEKNGEAERVRGLVTEL 83
Query: 247 HGIRTVTVYNDRDLRPSKKLGIHLQRPSGTP*DDSF 140
G+ ++ RP +KLGI L + DSF
Sbjct: 84 DGLTKKVLFATLLHRPLEKLGISLFKKEIMCVSDSF 119
>At2g36470.1 68415.m04476 expressed protein
Length = 327
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -3
Query: 231 SPSTTTVISAHPKS*GSTCRDPRGPRKMIAST 136
S + T VIS PKS + R P+G RK+ +S+
Sbjct: 63 SDNLTVVISTPPKSYSVSLRKPKGSRKLTSSS 94
>At2g20960.1 68415.m02479 expressed protein pEARLI 4 gene product
[Arabidopsis thaliana] GI:871782
Length = 748
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = -3
Query: 174 RDPRGPRKMIASTEVPYARPCRRPSRYQGSQQEPRPCSPRLQPTCDR 34
R P GPR + Y P R + + EP P P+ QP R
Sbjct: 308 RSP-GPRSKTPEPQPTYFEPSSRTPKQRSKTPEPSPRIPQTQPMSHR 353
>At5g51570.1 68418.m06394 band 7 family protein similar to
hypersensitive-induced response protein [Zea mays]
GI:7716468; contains Pfam profile PF01145: SPFH domain /
Band 7 family
Length = 292
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -2
Query: 403 HALRETLMADISRIPRAVIRIAMNAINRQNVIDIQDEKRGEEPNLVECQR 254
+++ LM DI IP +R AMN IN + + +GE +++ +R
Sbjct: 143 YSIEHILMVDI--IPDPSVRKAMNEINAAQRLQLASVYKGEAEKILQVKR 190
>At5g08660.1 68418.m01031 expressed protein contains Pfam domain
PF05003: protein of unknown function (DUF668)
Length = 649
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +2
Query: 290 LFILYINDILSIDGIHCYADDSTGNARYIGHQSLSQSVVQERRSKLVS 433
L + Y N I+ ID + A T NAR +QSL + RSK+ S
Sbjct: 377 LALHYANIIVQIDTLVARASSITSNARDSLYQSLPPGIKLALRSKIKS 424
>At1g70300.1 68414.m08088 potassium transporter, putative similar to
potassium transporter HAK2p [Mesembryanthemum
crystallinum] gi|14091471|gb|AAK53759; KUP/HAK/KT
Transporter family member, PMID:11500563; contains Pfam
profile PF02705: K+ potassium transporter
Length = 782
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 197 GWAEITVVVDGDCPNTMNITLAFHKVRFFPTLFILYINDILSI 325
G A ITV++ C ++ I L +HK F +F+++ I S+
Sbjct: 427 GLAVITVMLVTTCLMSLVIVLCWHKSVIFAIVFVVFFGTIESL 469
>At3g32940.1 68416.m04174 expressed protein
Length = 607
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = -3
Query: 240 LGQSPSTTTVISAHPKS*GSTCRDPRGPRKMIASTEVPYARPCRRPSRYQGSQQEPRPCS 61
L +P T +V + P S GS + P GPR + + + P RP+ Q RP +
Sbjct: 347 LSNTPRTYSV-TLPPYS-GSQIQ-PIGPRSTVRPSTLFTFHPVHRPTLLPDIDQSVRPLA 403
Query: 60 PRLQP 46
P P
Sbjct: 404 PNFSP 408
>At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/57 (22%), Positives = 25/57 (43%)
Frame = +3
Query: 42 RWAEALESKGEALAVSLDIAKAFDRVWHRALLXKLSSYGVPEGLCKWIPSFLDGRRS 212
+WA L+S + ++ KA + K+ Y + C+W+P DG+ +
Sbjct: 392 KWALGLQSHAHPREIMNEVLKALQEL--NVCWKKIGHYNMK---CRWVPGLADGQNT 443
>At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/57 (22%), Positives = 25/57 (43%)
Frame = +3
Query: 42 RWAEALESKGEALAVSLDIAKAFDRVWHRALLXKLSSYGVPEGLCKWIPSFLDGRRS 212
+WA L+S + ++ KA + K+ Y + C+W+P DG+ +
Sbjct: 392 KWALGLQSHAHPREIMNEVLKALQEL--NVCWKKIGHYNMK---CRWVPGLADGQNT 443
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 435 KWRTLWGESPNGVN*TWFNSTPIKTKFCAFTAKKEPIC 548
+W T WG + + N T F S P F ++P+C
Sbjct: 17 EWATEWGGAKSKENRTPFKSLPYYCCALTFLPFEDPVC 54
>At3g61250.1 68416.m06855 myb family transcription factor (MYB17)
contains PFAM profile: Myb-like DNA-binding domain
PF00249
Length = 299
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 491 FNPDKDQVLRVHCEEGTHLSWRAM 562
+ P++D+VL H ++ H SWR +
Sbjct: 17 WTPEEDEVLVAHIKKNGHGSWRTL 40
>At3g02150.2 68416.m00185 TCP family transcription factor, putative
similar to transcription factor PCF6 [Oryza sativa
(japonica cultivar-group)] GI:20975255; contains Pfam
profile PF03634: TCP family transcription factor
Length = 355
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -3
Query: 261 ASVMFMVLGQSPSTTTVISAHP--KS*GSTCRDPRGPRKMIASTEVP 127
+ ++ + SP+TTT+ S P S GS + PR+M++ ++P
Sbjct: 239 SQILVCPMTTSPTTTTIQSLFPSSSSAGSGTMETLDPRQMVSHFQMP 285
>At1g48050.1 68414.m05356 Ku80 family protein identical to Ku80-like
protein [Arabidopsis thaliana] GI:12006422; contains
Pfam profiles: PF02197 Regulatory subunit of type II PKA
R-subunit, PF02735: Ku70/Ku80 beta-barrel domain,
PF03731: Ku70/Ku80 N-terminal alpha/beta domain,
PF03730: Ku70/Ku80 C-terminal arm
Length = 680
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 131 CPMPDPVEGLRDIKAHSKSLALALQGFSPPVTVTETVLS 15
CP DP EG +D + + ++ +A +G V + LS
Sbjct: 131 CPTKDPFEGTKDDQVSTIAMKMAAEGIKMESIVMRSNLS 169
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,531,662
Number of Sequences: 28952
Number of extensions: 327219
Number of successful extensions: 863
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -