Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0910
         (564 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_41009| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.65 
SB_40381| Best HMM Match : Evr1_Alr (HMM E-Value=1.1e-14)              30   1.1  
SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.6  
SB_14316| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.1  
SB_27655| Best HMM Match : 7tm_1 (HMM E-Value=2.90069e-43)             27   8.0  

>SB_41009| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 427

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 477 LETLELISQGGWRIYVVDVYGHQ*SLNTGWTVT 379
           ++ LE I +G W+ YV  +  H  +  TGW VT
Sbjct: 294 IQLLEKIDKGCWKAYVSTLVNHFQTPGTGWCVT 326


>SB_40381| Best HMM Match : Evr1_Alr (HMM E-Value=1.1e-14)
          Length = 332

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +3

Query: 195 DTCDNIRSKI-GTNLFYL*RTYIALETGQYATSQCLISVAKLGV*FAPGYIFIL 353
           D  D +R++I  T+  ++  T + L    Y TS CL+    +GV    GY++ +
Sbjct: 264 DDADLVRAQIPSTSRPHVITTVLTLGLNTYDTSLCLVVYTAIGVALIAGYLYFM 317


>SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1887

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +3

Query: 51   DELCSGGERCCGKN--EIITS*LKLCFSPPTR*GENEIASQCYQ 176
            D  C G ++CC ++    + S + LC  PP++  E ++ S+ Y+
Sbjct: 1636 DSDCPGSQKCCRQHFANCLASQM-LCIEPPSKVQEKQMLSRLYR 1678


>SB_14316| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1472

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 355 NKIKI*PGANHTPNLATEMRH*LVAYCPVS 266
           N ++I P   H  ++ T M + LV YCPV+
Sbjct: 132 NLVQISPRTKHENSVFTVMENTLVGYCPVT 161


>SB_27655| Best HMM Match : 7tm_1 (HMM E-Value=2.90069e-43)
          Length = 337

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 221 FAPYIITSVFFSLPMLIALRGYFIFTLTCR 132
           FAP + T VFF  P++  +  Y    LT R
Sbjct: 163 FAPLVTTGVFFLAPLVFIVLAYVGIFLTAR 192


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,516,515
Number of Sequences: 59808
Number of extensions: 377899
Number of successful extensions: 719
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1325051197
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)