Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0908
         (625 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    22   3.6  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   3.6  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   3.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   3.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   4.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.3  

>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 239 RIHAGHRPYR 210
           R+H G RPYR
Sbjct: 30  RLHTGERPYR 39



 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 248 RDRRIHAGHRPY 213
           R  R+H G RPY
Sbjct: 55  RHLRVHTGERPY 66


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 239 RIHAGHRPYRHR 204
           R H+G RPYR R
Sbjct: 70  RTHSGERPYRCR 81


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 239 RIHAGHRPYRHR 204
           R H+G RPYR R
Sbjct: 326 RTHSGERPYRCR 337


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 239 RIHAGHRPYR 210
           R+H G RPYR
Sbjct: 183 RLHTGERPYR 192



 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 248 RDRRIHAGHRPY 213
           R  R+H G RPY
Sbjct: 208 RHLRVHTGERPY 219


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -2

Query: 546 SSGWCSCTGYRSCTTRLHHHAPTDCVEGIGDDTG 445
           SS WC+ + Y S +     H P   +    DD G
Sbjct: 144 SSTWCNYSAYSSASRHHVDHQPVPYLTP-ADDRG 176


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +3

Query: 303 FRCVRARYHHLPC 341
           + C   R HH+PC
Sbjct: 935 YMCEGERKHHMPC 947


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,458
Number of Sequences: 336
Number of extensions: 2405
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)