Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0906
         (502 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   4.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   4.7  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   8.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 61   KQATSSS*STSWRPGA 108
            +  TS S +TSW PG+
Sbjct: 1347 QSTTSVSTTTSWNPGS 1362


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 59  RQPCLQVVGIFDVNGHLGF 3
           R P    +G+F +NG   F
Sbjct: 627 RAPTFTALGLFPINGSFAF 645


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +2

Query: 17  HSHQRFRRPEDKAGGSRRQARRDR 88
           H  +   R   ++GG RRQ R  R
Sbjct: 572 HYKEHIMRSITESGGRRRQTREKR 595


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 453 FKFITDVKNIFYSFIKNVY 397
           F+F+  V NIF +F+  ++
Sbjct: 66  FRFVYAVYNIFGAFVMGLF 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,097
Number of Sequences: 336
Number of extensions: 1801
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)