Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0906
(502 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 51 5e-07
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 50 1e-06
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 50 1e-06
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 3e-06
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 5e-05
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 38 0.004
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 38 0.004
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 36 0.019
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 36 0.025
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 36 0.025
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 36 0.025
SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3) 34 0.057
SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093) 31 0.53
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021) 31 0.71
SB_47047| Best HMM Match : DUF761 (HMM E-Value=3.2) 30 0.93
SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019) 29 1.6
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 29 1.6
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 29 2.8
SB_13997| Best HMM Match : EGF_CA (HMM E-Value=1.2e-05) 28 3.8
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 28 5.0
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 28 5.0
SB_49054| Best HMM Match : Chordopox_A30L (HMM E-Value=4.1) 27 6.6
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 51.2 bits (117), Expect = 5e-07
Identities = 26/76 (34%), Positives = 34/76 (44%)
Frame = +3
Query: 18 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 197
I ++D + AG +LVVIDF ATWCGPCK I P ++ +
Sbjct: 11 IVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVFTNLSMKF-MDVVFLKVDVDQ 69
Query: 198 XXXXASEYNINSMPTF 245
A I +MPTF
Sbjct: 70 CQLTAESCGIRAMPTF 85
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 50.0 bits (114), Expect = 1e-06
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = +3
Query: 69 DKLVVIDFMATWCGPCKMIGPKLDEIAAE 155
+++ IDF ATWCGPC+MIGPK +E+A E
Sbjct: 11 NEVAAIDFTATWCGPCRMIGPKFEEMAKE 39
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 49.6 bits (113), Expect = 1e-06
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 6 PKMSIHIKDSDDLKT-RLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXX 182
P+ ++ + + D T L AG KLVV DF A+WCGPCK I P + +E
Sbjct: 5 PRGNVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGL-SEKYKQAVFLK 63
Query: 183 XXXXXXXXXASEYNINSMPTF 245
A++ + +MPTF
Sbjct: 64 IDVDVCQELAAKQGVTAMPTF 84
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 48.4 bits (110), Expect = 3e-06
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +3
Query: 24 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 155
I++ + + + DKLVVIDF A WCGPC+ I PK ++A E
Sbjct: 15 IEERAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMALE 58
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 44.4 bits (100), Expect = 5e-05
Identities = 27/88 (30%), Positives = 39/88 (44%)
Frame = +3
Query: 63 AGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPT 242
A + V+DF A WCGPC PK +++A + SE NI+S PT
Sbjct: 449 ASEDAWVVDFYAPWCGPCMRFAPKYEQLAKMLKGKVRAAKVNCEQDYGLCSEANIHSYPT 508
Query: 243 FVLVRMARNWTNSLALTSTNSKQLSLNT 326
VR+ T +T + + L LN+
Sbjct: 509 ---VRLYLGSTRQ-GMTQSINGDLQLNS 532
Score = 31.1 bits (67), Expect = 0.53
Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +3
Query: 84 IDFMATWCGPCKMIGPKLDEIAAE-MXXXXXXXXXXXXXXXXXASEYNINSMPTFVL 251
+DF A WC PC + P+ + A + +YNI S PT +L
Sbjct: 307 VDFFAPWCPPCMRLLPEYRKAARSFVGKPVGFGTVDCTVHSQLCHQYNIRSYPTTIL 363
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 96 ATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 248
A WC PCK++ P+LD I AE A + +N++PT +
Sbjct: 46 ACWCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVI 96
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 102 WCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 248
WC PCK++ P+LD I AE A + +N++PT +
Sbjct: 2 WCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVI 50
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 12 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 155
+S + D D + AG +++++F A WCG CK + P+ E AAE
Sbjct: 536 LSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEY-ETAAE 582
Score = 35.5 bits (78), Expect = 0.025
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 72 KLVVIDFMATWCGPCKMIGPKLDEIAAEM 158
K V+I+F A WCG CK + PK +E+ ++
Sbjct: 881 KDVLIEFYAPWCGHCKSLEPKYNELGEKL 909
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 12 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 155
+S + D D + AG +++++F A WCG CK + P+ E AAE
Sbjct: 11 LSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEY-ETAAE 57
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 36.7 bits (81), Expect = 0.011
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +3
Query: 69 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM 158
+ L++++F A WCG CK + P+ ++ A E+
Sbjct: 193 ESLMLVEFFAPWCGHCKQLAPEYEKAAQEL 222
Score = 34.3 bits (75), Expect = 0.057
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +3
Query: 15 SIHIKDSDDLKTRLAEAGDK------LVVIDFMATWCGPCKMIGPKLDEIAAEM 158
S +K+ DD+ ++ D+ +++++F A WCG CK + P+ + A +M
Sbjct: 54 SDEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKM 107
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 35.9 bits (79), Expect = 0.019
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 57 AEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEM 158
A A +K V+++F A WCG CK + P+ + A ++
Sbjct: 37 AVAANKHVLVEFYAPWCGHCKALAPEYAKAAGQL 70
Score = 35.1 bits (77), Expect = 0.033
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 54 LAEAGDKLVVIDFMATWCGPCKMIGPKLDEI 146
+A DK V ++F A WCG CK + P D++
Sbjct: 397 VARNKDKNVFVEFYAPWCGHCKQLAPIWDQL 427
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 35.5 bits (78), Expect = 0.025
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +3
Query: 75 LVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPT 242
L +++F A WCG C+ + P+ + A E+ AS Y + PT
Sbjct: 99 LWLVEFFAPWCGHCQRLAPEWAKAATELKGKVKVGALDATVHTVTASRYQVQGYPT 154
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 35.5 bits (78), Expect = 0.025
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 66 GDKLVVIDFMATWCGPCKMIGPKLDEI 146
G+K +++F A WCG CK + P +++
Sbjct: 38 GEKFALVEFYAPWCGHCKQLAPTYEQL 64
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 35.5 bits (78), Expect = 0.025
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 36 DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEM 158
DD A K V++DF A WC CK + P ++A E+
Sbjct: 140 DDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDVAKEL 180
Score = 31.9 bits (69), Expect = 0.31
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 69 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM 158
++ V++DF A WC C+ + P D A ++
Sbjct: 68 NEYVLVDFYAPWCSDCQRLSPLFDTAALQL 97
>SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3)
Length = 222
Score = 34.3 bits (75), Expect = 0.057
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 54 LAEAGDKLVVIDFMATWCGPCKMIGP 131
L E+ K+ +IDF A+WC PC++ P
Sbjct: 172 LKESMGKVTIIDFWASWCQPCRVENP 197
>SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093)
Length = 148
Score = 31.1 bits (67), Expect = 0.53
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = +3
Query: 45 KTRLAEAGD----KLVVIDFMATWCGPCKMIGPKLDEIAAEM 158
K L +AG+ K++ + F A WC PC+ P L + E+
Sbjct: 13 KGELVDAGEAVKGKVIAVYFSAHWCPPCRQFTPILKDFYEEL 54
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 30.7 bits (66), Expect = 0.71
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 72 KLVVIDFMATWCGPCKMIGPKLDEIAAEM 158
+++++DF A WC C + PK ++ A ++
Sbjct: 40 EVMLVDFYAPWCSDCDNLRPKYEKAARDL 68
>SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021)
Length = 293
Score = 30.7 bits (66), Expect = 0.71
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 69 DKLVVIDFMATWCGPCKMIGPKLDEIAAE 155
+K+V I F A+WC PC+ P L + E
Sbjct: 154 NKVVAIYFSASWCPPCQKFTPLLKDFYEE 182
>SB_47047| Best HMM Match : DUF761 (HMM E-Value=3.2)
Length = 389
Score = 30.3 bits (65), Expect = 0.93
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -1
Query: 151 AAISSSLGPIILHGPHQVAMKSITTSLSPASASLVFRSSESL 26
+A SS + P++ H H V+ + ++ P S++ S E L
Sbjct: 338 SAQSSPINPVVYHDNHDVSTSGVKSATCPVCESVIHGSGEEL 379
>SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019)
Length = 415
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 72 KLVVIDFMATWCGPCKMIGPKLDE 143
K+V + F A WC PC+ PKL E
Sbjct: 30 KIVGLYFSAHWCPPCRGFTPKLVE 53
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +3
Query: 63 AGD---KLVVIDFMATWCGPCKMIGPKL 137
AGD K+V I F A WC PC+ P+L
Sbjct: 168 AGDLKGKIVGIYFSAHWCPPCRAFTPEL 195
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 78 VVIDFMATWCGPCKMIGPKLDEIA 149
V++ F A WCG CK PK ++ A
Sbjct: 167 VLVMFYAPWCGHCKNAKPKYEKAA 190
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 72 KLVVIDFMATWCGPCKMIGPKL 137
K V++ F A WCG CK P+L
Sbjct: 213 KHVLVMFYAPWCGHCKKAKPEL 234
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +3
Query: 6 PKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 149
P +H++D DD + + V++ F A WCG CK + P+ + A
Sbjct: 81 PSEVVHLRDDMFDDFVAK-----NPSVLVMFYAPWCGHCKAMKPEYVDAA 125
>SB_13997| Best HMM Match : EGF_CA (HMM E-Value=1.2e-05)
Length = 770
Score = 28.3 bits (60), Expect = 3.8
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = -2
Query: 486 FQRLQTQKINIFKFITDVKNIFYSFIKNVYMFXLX*FHLSFHRRLRTTLVSIYLCLRIVV 307
FQR+ T K+N K T + + +S N + L H LRT L + LC ++
Sbjct: 151 FQRIVTCKLNPLKD-TPGRAVLHSTSVNRRIQMLDNIHHYLFSSLRTRLHQVVLCYTVIE 209
Query: 306 LSLSTLAPENSS 271
+ ++ P +S+
Sbjct: 210 RNKRSMLPVSSA 221
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 372 LSFHRRLRTTLVSIYLCLRIVVLSLSTLAPENSSSFLPF*LR 247
L+ H R + L S+ + LR+ + AP +S PF LR
Sbjct: 591 LAIHHRRTSALASVAVTLRVTTTPAALNAPLQGASHSPFRLR 632
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 473 KHKKLISSNSLQTLKTFFIHLLKT 402
K KL+SSNS+ LK +HLL++
Sbjct: 810 KEGKLVSSNSMSKLKQKVVHLLES 833
>SB_49054| Best HMM Match : Chordopox_A30L (HMM E-Value=4.1)
Length = 432
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 2 KTQDVHSHQRFRRPEDKAGGSRRQARRDR 88
+ ++ +R RR ED+ G RR+ RRD+
Sbjct: 166 REKEREKERRRRRHEDEGSGDRRRERRDK 194
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 27.5 bits (58), Expect = 6.6
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 75 LVVIDFMATWCGPCKMIGPKLDEIA 149
++++DF A WC C+ + P+L+ A
Sbjct: 39 IMLVDFYAPWCHHCQELLPQLEGAA 63
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,826,915
Number of Sequences: 59808
Number of extensions: 235650
Number of successful extensions: 599
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1087245449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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