Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0906
         (502 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    82   1e-17
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          24   3.3  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   5.8  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   5.8  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          23   7.7  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          23   7.7  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          23   7.7  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   7.7  

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 81.8 bits (193), Expect = 1e-17
 Identities = 35/78 (44%), Positives = 48/78 (61%)
 Frame = +3

Query: 24  IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXX 203
           +KDS+D   +L  AGD+LVV+DF ATWCGPCK+I PKL+E   +                
Sbjct: 5   VKDSEDFNNKLEAAGDQLVVVDFFATWCGPCKVIAPKLEEFQNKYADKIVVVKVDVDECE 64

Query: 204 XXASEYNINSMPTFVLVR 257
             A++YNI SMPTF+ ++
Sbjct: 65  ELAAQYNIASMPTFLFIK 82


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 52  GWRKQATSSS*STSWRPGADRAR*SGLNW 138
           GW+ ++ SS  +    PGA RA    L+W
Sbjct: 214 GWKYRSISSLHAPPSHPGAHRAAEPRLDW 242


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -2

Query: 342 LVSIYLCLRIVVLSLSTLAPE 280
           LVSI +C+ +VVL++   +P+
Sbjct: 316 LVSISICVTVVVLNVHFRSPQ 336


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -2

Query: 342 LVSIYLCLRIVVLSLSTLAPE 280
           LVSI +C+ +VVL++   +P+
Sbjct: 316 LVSISICVTVVVLNVHFRSPQ 336


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 134 FRPDHLARSAPGRHEVDHDELVAC 63
           F+P  L   A G HE  ++ ++ C
Sbjct: 263 FQPSFLGMEACGIHETTYNSIMKC 286


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 134 FRPDHLARSAPGRHEVDHDELVAC 63
           F+P  L   A G HE  ++ ++ C
Sbjct: 263 FQPSFLGMEACGIHETTYNSIMKC 286


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 134 FRPDHLARSAPGRHEVDHDELVAC 63
           F+P  L   A G HE  ++ ++ C
Sbjct: 263 FQPSFLGMEACGIHETTYNSIMKC 286


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 422 KMFLTSVMNLKILIFCVCSLWNAKN 496
           ++ L  ++ + I+ FCV SLW  K+
Sbjct: 339 QIVLLIILLVAIVDFCVGSLWGPKS 363


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 465,748
Number of Sequences: 2352
Number of extensions: 7762
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)