Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0906
(502 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 59 2e-09
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 58 4e-09
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 56 1e-08
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 56 1e-08
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 55 3e-08
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 54 5e-08
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 53 1e-07
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 51 5e-07
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 51 5e-07
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 50 7e-07
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 50 9e-07
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 50 1e-06
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 49 2e-06
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 48 3e-06
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 48 4e-06
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 47 6e-06
At2g33270.1 68415.m04078 thioredoxin family protein contains Pfa... 47 6e-06
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 47 6e-06
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 46 1e-05
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 45 3e-05
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 45 3e-05
At1g08570.1 68414.m00950 thioredoxin family protein contains Pfa... 45 3e-05
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 44 4e-05
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 43 1e-04
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 41 5e-04
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 38 0.003
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 38 0.003
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 38 0.005
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 36 0.012
At5g06690.1 68418.m00756 thioredoxin family protein low similiar... 36 0.015
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 36 0.015
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 36 0.015
At2g40790.1 68415.m05032 thioredoxin family protein contains Pfa... 35 0.027
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 35 0.035
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 35 0.035
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 35 0.035
At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to thiore... 35 0.035
At5g04260.1 68418.m00417 thioredoxin family protein low similari... 34 0.047
At3g03860.1 68416.m00398 expressed protein 34 0.047
At2g35010.1 68415.m04295 thioredoxin family protein similar to S... 34 0.047
At1g60420.1 68414.m06802 DC1 domain-containing protein contains ... 34 0.047
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 33 0.11
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 33 0.11
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 32 0.19
At1g76080.1 68414.m08835 thioredoxin family protein low similari... 32 0.25
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 30 1.0
At1g43100.1 68414.m04965 glycoside hydrolase family 28 protein /... 29 1.8
At1g43090.1 68414.m04964 glycoside hydrolase family 28 protein /... 29 1.8
At1g43080.1 68414.m04963 glycoside hydrolase family 28 protein /... 29 1.8
At1g07700.3 68414.m00829 thioredoxin family protein low similari... 29 1.8
At1g07700.2 68414.m00827 thioredoxin family protein low similari... 29 1.8
At1g07700.1 68414.m00828 thioredoxin family protein low similari... 29 1.8
At4g31240.2 68417.m04435 expressed protein 28 4.1
At4g31240.1 68417.m04434 expressed protein 28 4.1
At5g61340.1 68418.m07697 expressed protein 27 5.4
At5g51290.1 68418.m06358 ceramide kinase-related contains weak s... 27 5.4
At4g13760.1 68417.m02135 glycoside hydrolase family 28 protein /... 27 5.4
At4g02330.1 68417.m00317 pectinesterase family protein contains ... 27 5.4
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 27 7.1
At2g15460.1 68415.m01768 glycoside hydrolase family 28 protein /... 27 7.1
At2g15450.1 68415.m01767 glycoside hydrolase family 28 protein /... 27 7.1
At4g12050.1 68417.m01917 DNA-binding protein-related contains Pf... 27 9.4
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 27 9.4
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 58.8 bits (136), Expect = 2e-09
Identities = 24/73 (32%), Positives = 41/73 (56%)
Frame = +3
Query: 54 LAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINS 233
L + DK V++DF ATWCGPC+++ P L+E++ + A++Y I +
Sbjct: 71 LLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDTEKYPSLANKYQIEA 130
Query: 234 MPTFVLVRMARNW 272
+PTF+L + + W
Sbjct: 131 LPTFILFKDGKLW 143
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 57.6 bits (133), Expect = 4e-09
Identities = 25/79 (31%), Positives = 41/79 (51%)
Frame = +3
Query: 21 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXX 200
H D ++ A+ +KL+VIDF A+WC PC+MI P +++A +
Sbjct: 12 HTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDEL 71
Query: 201 XXXASEYNINSMPTFVLVR 257
A E+ + +MPTFV ++
Sbjct: 72 QSVAKEFGVEAMPTFVFIK 90
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 56.0 bits (129), Expect = 1e-08
Identities = 25/66 (37%), Positives = 38/66 (57%)
Frame = +3
Query: 69 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 248
+KL+V+DF A+WCGPC+MI P + + A+ A E+N+ +MPTFV
Sbjct: 47 NKLLVVDFSASWCGPCRMIEPAIHAM-ADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFV 105
Query: 249 LVRMAR 266
LV+ +
Sbjct: 106 LVKRGK 111
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 56.0 bits (129), Expect = 1e-08
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +3
Query: 18 IHIKDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXX 191
+ IK+ + K+RL D KL+VI+F A WCGPCK + PKL+E+AA+
Sbjct: 40 VEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAKYTDVEFVKIDVD 99
Query: 192 XXXXXXASEYNINSMPTFVLVRMAR 266
E+N++++P V ++ R
Sbjct: 100 VLMSVW-MEFNLSTLPAIVFMKRGR 123
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 54.8 bits (126), Expect = 3e-08
Identities = 26/82 (31%), Positives = 42/82 (51%)
Frame = +3
Query: 12 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXX 191
+SIH + KT+ A+ +L+++ F ATWCGPC+ + P +A +
Sbjct: 273 ISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRVVFLKVDID 332
Query: 192 XXXXXXASEYNINSMPTFVLVR 257
AS +NI+S+PTF +R
Sbjct: 333 KANDVAAS-WNISSVPTFCFIR 353
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 54.0 bits (124), Expect = 5e-08
Identities = 25/76 (32%), Positives = 36/76 (47%)
Frame = +3
Query: 30 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXX 209
D D + AGDK+VV+D WCGPCK+I PK E++ +
Sbjct: 84 DKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMVFLKLDCNQDNKPL 143
Query: 210 ASEYNINSMPTFVLVR 257
A E I +PTF +++
Sbjct: 144 AKELGIRVVPTFKILK 159
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 52.8 bits (121), Expect = 1e-07
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +3
Query: 69 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 248
DK V++D+ ATWCGPC+ + P L+E++ + A++Y I ++PTF+
Sbjct: 81 DKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKIDTEKYPSIANKYKIEALPTFI 140
Query: 249 LVR 257
L +
Sbjct: 141 LFK 143
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 50.8 bits (116), Expect = 5e-07
Identities = 24/79 (30%), Positives = 44/79 (55%)
Frame = +3
Query: 21 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXX 200
++ DS+ +T++ E+ D V+++F A WCGPC+MI P +D++A +
Sbjct: 90 NLSDSE-WQTKVLES-DVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTDES 147
Query: 201 XXXASEYNINSMPTFVLVR 257
A+ Y I S+PT ++ +
Sbjct: 148 PNTANRYGIRSVPTVIIFK 166
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 50.8 bits (116), Expect = 5e-07
Identities = 24/76 (31%), Positives = 35/76 (46%)
Frame = +3
Query: 30 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXX 209
D D + AG+KLVV+D WCGPCK+I PK ++ +
Sbjct: 74 DKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKALSEKYDDVVFLKLDCNPDNRPL 133
Query: 210 ASEYNINSMPTFVLVR 257
A E I +PTF +++
Sbjct: 134 AKELGIRVVPTFKILK 149
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 50.4 bits (115), Expect = 7e-07
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = +3
Query: 45 KTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYN 224
K + A KL+VIDF ATWC PC+ I P ++ A+ A E+
Sbjct: 19 KLKAANESKKLIVIDFTATWCPPCRFIAPVFADL-AKKHLDVVFFKVDVDELNTVAEEFK 77
Query: 225 INSMPTFVLVR 257
+ +MPTF+ ++
Sbjct: 78 VQAMPTFIFMK 88
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 50.0 bits (114), Expect = 9e-07
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +3
Query: 6 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 155
P M I I ++ L +AGD+LV++DF TWCG C+ + PKL + A E
Sbjct: 93 PNM-IDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKE 141
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 49.6 bits (113), Expect = 1e-06
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +3
Query: 45 KTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYN 224
K + A KL+VIDF A+WC PC+ I P E+A + A E+
Sbjct: 19 KVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKF-TNVVFFKIDVDELQAVAQEFK 77
Query: 225 INSMPTFVLVR 257
+ +MPTFV ++
Sbjct: 78 VEAMPTFVFMK 88
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/97 (25%), Positives = 41/97 (42%)
Frame = +3
Query: 33 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA 212
+D L D+ V +DF A WCGPCKMI P ++E+A +
Sbjct: 80 NDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATP 139
Query: 213 SEYNINSMPTFVLVRMARNWTNSLALTSTNSKQLSLN 323
+Y + S+PT ++ + S ++ S+N
Sbjct: 140 GQYGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSIN 176
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 48.4 bits (110), Expect = 3e-06
Identities = 26/80 (32%), Positives = 40/80 (50%)
Frame = +3
Query: 18 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXX 197
I K+S D K A+ K+VV +F ATWCGPCK++ P E+ +E
Sbjct: 28 ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIEL-SEKHSSLMFLLVDVDE 86
Query: 198 XXXXASEYNINSMPTFVLVR 257
+S ++I + PTF ++
Sbjct: 87 LSDFSSSWDIKATPTFFFLK 106
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 48.0 bits (109), Expect = 4e-06
Identities = 23/82 (28%), Positives = 43/82 (52%)
Frame = +3
Query: 12 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXX 191
++ H ++ + + + A LVV+DF A+WCGPC+ I P ++A ++
Sbjct: 9 IACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKL-PNVLFLKVDT 67
Query: 192 XXXXXXASEYNINSMPTFVLVR 257
AS++ I +MPTF+ ++
Sbjct: 68 DELKSVASDWAIQAMPTFMFLK 89
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 47.2 bits (107), Expect = 6e-06
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 78 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVL 251
VV+DF A WCGPCKMI P ++++A +Y + S+PT ++
Sbjct: 101 VVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMI 158
>At2g33270.1 68415.m04078 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 273
Score = 47.2 bits (107), Expect = 6e-06
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = +3
Query: 3 KPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 149
KP M + DL L AGDKLVV+DF + CG CK + PK+ +IA
Sbjct: 92 KPNMK-SVTSPQDLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKIA 139
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 47.2 bits (107), Expect = 6e-06
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +3
Query: 60 EAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMP 239
+ +KL+VIDF A WCGPCK + P++ EIA++ A Y ++P
Sbjct: 40 KGSNKLLVIDFTAVWCGPCKAMEPRVREIASK-YSEAVFARVDVDRLMDVAGTYRAITLP 98
Query: 240 TFVLVR 257
FV V+
Sbjct: 99 AFVFVK 104
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 46.0 bits (104), Expect = 1e-05
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 78 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVLVR 257
V+++F+ATWCGPCK+I P ++ ++ E +E+ + +P F+L +
Sbjct: 90 VLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDANPKLIAEFKVYGLPHFILFK 149
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 45.2 bits (102), Expect = 3e-05
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +3
Query: 6 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 155
P M + I +++ + L+ AG++LV+++F TWC C+ + PKL + A E
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVE 151
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 45.2 bits (102), Expect = 3e-05
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +3
Query: 6 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 155
P M + I +++ + L+ AG++LV+++F TWC C+ + PKL + A E
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVE 151
>At1g08570.1 68414.m00950 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to ESTs gb|T46281,
gb|R83933, gb|N65879, emb|F14466, gb|N96726,
gb|AA042340, and emb|Z18150
Length = 275
Score = 45.2 bits (102), Expect = 3e-05
Identities = 27/96 (28%), Positives = 42/96 (43%)
Frame = +3
Query: 24 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXX 203
I + +L L AGDKLVV+DF + CG CK + PK+ + AEM
Sbjct: 102 ISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQF-AEMNPDVQFLQVNYEEHK 160
Query: 204 XXASEYNINSMPTFVLVRMARNWTNSLALTSTNSKQ 311
++ +P F R ++ S + T+ K+
Sbjct: 161 SMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNATIKK 196
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 44.4 bits (100), Expect = 4e-05
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +3
Query: 78 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVLVR 257
V+++F +WCGPC+M+ +DEIA + A EY I ++P +L +
Sbjct: 87 VLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFK 146
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 18 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 149
+ I+ ++ L L AGD+LVV+DF + CG CK + PK+ ++A
Sbjct: 88 LEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQLA 131
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 40.7 bits (91), Expect = 5e-04
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 GDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMP 239
GD+ V ++DF ATWCGPC ++ +L+ +A E A + + +P
Sbjct: 91 GDRKVPLIVDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDDEYEFARDMQVRGLP 150
Query: 240 TFVLV 254
T +
Sbjct: 151 TLFFI 155
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 33 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 149
SD L + +G K V+++F A WCG C+ + P LDE+A
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVA 418
Score = 34.3 bits (75), Expect = 0.047
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +3
Query: 78 VVIDFMATWCGPCKMIGPKLDEIAAEM 158
+V++F A WCG CK + P+ ++ A+ +
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASAL 76
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 33 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 149
SD L + +G K V+++F A WCG C+ + P LDE+A
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVA 418
Score = 34.3 bits (75), Expect = 0.047
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +3
Query: 78 VVIDFMATWCGPCKMIGPKLDEIAAEM 158
+V++F A WCG CK + P+ ++ A+ +
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASAL 76
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 7/56 (12%)
Frame = +3
Query: 3 KPKMSIHIKDSDDLKTRLAEAGD-------KLVVIDFMATWCGPCKMIGPKLDEIA 149
K I ++++ +K +AE+ D K V+I+F A WCG C+ + P LDE+A
Sbjct: 361 KKSQPIPAENNEPVKVVVAESLDDIVFKSGKNVLIEFYAPWCGHCQKLAPILDEVA 416
Score = 35.9 bits (79), Expect = 0.015
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = +3
Query: 78 VVIDFMATWCGPCKMIGPKLDEIAAEM-----XXXXXXXXXXXXXXXXXASEYNINSMPT 242
+V++F A WCG C+ + P+ ++ A+E+ A+EY I PT
Sbjct: 49 IVVEFYAPWCGHCQKLAPEYEKAASELSSHNPPLALAKIDASEEANKEFANEYKIQGFPT 108
Query: 243 FVLVR 257
++R
Sbjct: 109 LKILR 113
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +3
Query: 75 LVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPT 242
+V+++F A WCG CK + P +++A + A +Y I PT
Sbjct: 50 VVLVEFFAPWCGHCKALTPTWEKVANILKGVATVAAIDADAHQSAAQDYGIKGFPT 105
Score = 34.3 bits (75), Expect = 0.047
Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = +3
Query: 3 KPKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXX 176
+P S+ + S DDL ++L +++F A WCG CK + P+ A +
Sbjct: 160 EPSASVELNASNFDDLVIE----SNELWIVEFFAPWCGHCKKLAPEWKRAAKNLQGKVKL 215
Query: 177 XXXXXXXXXXXASEYNINSMPTFVL 251
S + + PT ++
Sbjct: 216 GHVNCDVEQSIMSRFKVQGFPTILV 240
>At5g06690.1 68418.m00756 thioredoxin family protein low similiarity
to SP|P34723 Thioredoxin {Penicillium chrysogenum};
contains Pfam profile: PF00085 Thioredoxin
Length = 210
Score = 35.9 bits (79), Expect = 0.015
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = +3
Query: 78 VVIDFMATWCGPCKMIGPKLDEIAAE 155
++I++MA+WC C + PKL+++AAE
Sbjct: 121 IIIEWMASWCRKCIYLKPKLEKLAAE 146
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 35.9 bits (79), Expect = 0.015
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +3
Query: 78 VVIDFMATWCGPCKMIGPKLD---EIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 248
+ +DF A WCG CK + P+LD I A++ A + I++ PT +
Sbjct: 52 IFVDFYAPWCGHCKRLNPELDAAAPILAKLKQPIVIAKLNADKYSRLARKIEIDAFPTLM 111
Query: 249 L 251
L
Sbjct: 112 L 112
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 35.9 bits (79), Expect = 0.015
Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Frame = +3
Query: 3 KPKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXX 176
+P S+ + S D+L T E L +++F A WCG CK + P+ + A +
Sbjct: 161 EPSASVELNSSNFDELVTESKE----LWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKL 216
Query: 177 XXXXXXXXXXXASEYNINSMPTFVL 251
S + + PT ++
Sbjct: 217 GHVNCDAEQSIKSRFKVQGFPTILV 241
Score = 35.1 bits (77), Expect = 0.027
Identities = 12/56 (21%), Positives = 26/56 (46%)
Frame = +3
Query: 75 LVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPT 242
+V+++F A WCG C+ + P +++A+ + + +Y + PT
Sbjct: 48 VVLVEFFAPWCGHCQSLTPTWEKVASTLKGIATVAAIDADAHKSVSQDYGVRGFPT 103
>At2g40790.1 68415.m05032 thioredoxin family protein contains Pfam
profile: PF00085 thioredoxin
Length = 154
Score = 35.1 bits (77), Expect = 0.027
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +3
Query: 57 AEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSM 236
A + K++V++F A+WC P K I P E+A+ + E+N+++
Sbjct: 58 ANSHGKILVVNFKASWCLPSKTILPIYQELAS-TYTSMIFVTIDVEELAEFSHEWNVDAT 116
Query: 237 PTFVLVRMAR 266
PT V ++ R
Sbjct: 117 PTVVFLKDGR 126
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 34.7 bits (76), Expect = 0.035
Identities = 15/61 (24%), Positives = 24/61 (39%)
Frame = +3
Query: 69 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFV 248
+ +++F A WCG C+ + P+ A E+ A +Y I PT
Sbjct: 116 NSFAMVEFYAPWCGACQALTPEYAAAATELKGLAALAKIDATEEGDLAQKYEIQGFPTVF 175
Query: 249 L 251
L
Sbjct: 176 L 176
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 34.7 bits (76), Expect = 0.035
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 69 DKLVVIDFMATWCGPCKMIGPKLDEIAA 152
DK +++F A WCG CK + P+ +++ A
Sbjct: 40 DKGALVEFYAPWCGHCKKLAPEYEKLGA 67
Score = 33.9 bits (74), Expect = 0.062
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 69 DKLVVIDFMATWCGPCKMIGPKLDEIA 149
+K V+++F A WCG CK + P +++A
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVA 185
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 34.7 bits (76), Expect = 0.035
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 69 DKLVVIDFMATWCGPCKMIGPKLDEIAA 152
DK +++F A WCG CK + P+ +++ A
Sbjct: 40 DKGALVEFYAPWCGHCKKLAPEYEKLGA 67
Score = 33.9 bits (74), Expect = 0.062
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 69 DKLVVIDFMATWCGPCKMIGPKLDEIA 149
+K V+++F A WCG CK + P +++A
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVA 185
>At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to
thioredoxin 2 from Saccharomyces cerevisiae GI:173050,
3'-end of protein contains similarity to thioredoxins;
contains Pfam profile: PF00085 Thioredoxin; identical to
cDNA thioredoxin o (TRXO2) GI:15081458
Length = 159
Score = 34.7 bits (76), Expect = 0.035
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +3
Query: 24 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGPKLDEIA 149
+K + + L++A D + V F A WCGPC++I P + E++
Sbjct: 54 LKSEAEFNSALSKARDGSLPSVFYFTAAWCGPCRLISPVILELS 97
>At5g04260.1 68418.m00417 thioredoxin family protein low similarity
to SP|P29429 Thioredoxin. [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile: PF00085
Thioredoxin
Length = 192
Score = 34.3 bits (75), Expect = 0.047
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 78 VVIDFMATWCGPCKMIGPKLDEIAAE 155
VVI +MA WC C + PKL+++AAE
Sbjct: 101 VVIVWMAAWCRKCIYLKPKLEKLAAE 126
>At3g03860.1 68416.m00398 expressed protein
Length = 300
Score = 34.3 bits (75), Expect = 0.047
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +3
Query: 30 DSDDLKTRLA-EAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXX 206
D D L +A + G+ + + F A+WC + + PK D +++
Sbjct: 60 DGDSLDRLMASQHGNAYMSVLFYASWCPFSRAVRPKFDMLSSMFPQIQHLAVEHSQALPS 119
Query: 207 XASEYNINSMPTFVLVRMARN 269
S Y I+S+P+ ++V N
Sbjct: 120 VFSRYGIHSLPSILMVNQTLN 140
>At2g35010.1 68415.m04295 thioredoxin family protein similar to
SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa};
contains Pfam profile: PF00085 Thioredoxin
Length = 194
Score = 34.3 bits (75), Expect = 0.047
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 24 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGPKLDEIAAE 155
+K ++ +++A D + V F A WCGPC+ I P + E++ +
Sbjct: 89 VKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPCRFISPVIVELSKQ 134
>At1g60420.1 68414.m06802 DC1 domain-containing protein contains
Pfam domain PF03107: DC1 domain
Length = 578
Score = 34.3 bits (75), Expect = 0.047
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 21 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEI 146
++ D K +++ K +++ F A WC PC+ PKL E+
Sbjct: 347 YVLGKDGAKVLVSDLVGKTILMYFSAHWCPPCRAFTPKLVEV 388
Score = 32.7 bits (71), Expect = 0.14
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 72 KLVVIDFMATWCGPCKMIGPKLDEIAAEM 158
K + + F A WCGPC+ P+L E+ E+
Sbjct: 44 KKIGLYFSAAWCGPCQRFTPQLVEVYNEL 72
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +3
Query: 69 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTF 245
++ V+++F A WCG C+ + P+ A E+ A EY + PT
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKEDGVVLAKIDATEENELAQEYRVQGFPTL 179
Query: 246 V 248
+
Sbjct: 180 L 180
Score = 27.5 bits (58), Expect = 5.4
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 72 KLVVIDFMATWCGPCKMIGPKLDEIAAEM 158
K V+++ A WCG C+ + P +++A +
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHL 488
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +3
Query: 69 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTF 245
++ V+++F A WCG C+ + P+ A E+ A EY + PT
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKEDGVVLAKIDATEENELAQEYRVQGFPTL 179
Query: 246 V 248
+
Sbjct: 180 L 180
Score = 27.5 bits (58), Expect = 5.4
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 72 KLVVIDFMATWCGPCKMIGPKLDEIAAEM 158
K V+++ A WCG C+ + P +++A +
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHL 488
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 32.3 bits (70), Expect = 0.19
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +3
Query: 78 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVLVR 257
V++ F A WCGPC+ + P L+++ +E ++I+ +PT ++ +
Sbjct: 230 VMVMFTARWCGPCRDMIPILNKMDSEYKNEFKFYTVNFDTEIRFTERFDISYLPTTLVFK 289
>At1g76080.1 68414.m08835 thioredoxin family protein low similarity
to thioredoxin (TRX) [Fasciola hepatica] GI:6687568;
contains Pfam profile PF00085: Thioredoxin
Length = 302
Score = 31.9 bits (69), Expect = 0.25
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Frame = +3
Query: 66 GDKLVVIDFMATWCGPCKMIGP---KLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSM 236
G KL+V+D CGPC + P KL +E + N+ +
Sbjct: 206 GGKLIVLDVGLKHCGPCVKVYPTVLKLSRSMSETVVFARMNGDENDSCMEFLKDMNVIEV 265
Query: 237 PTFVLVR 257
PTF+ +R
Sbjct: 266 PTFLFIR 272
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 29.9 bits (64), Expect = 1.0
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +3
Query: 96 ATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVLVRMAR 266
A WC PCK I P ++A+ ++E+N+ + PT V ++ R
Sbjct: 17 APWCVPCKKIEPVFRDLASR-YPSMIFVTVDVEELAEFSNEWNVEATPTVVFLKDGR 72
>At1g43100.1 68414.m04965 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67)
(Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea
mays}; contains Pfam profile PF00295: Glycosyl
hydrolases family 28 (polygalacturonases)
Length = 444
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +1
Query: 346 CTQPPMETKMELXKXKHVYVFNK*IKNVFNVCNEFEDINFLCLQPLECK 492
C PP E E HV + + +KN++ N +N C + CK
Sbjct: 317 CPHPPCEH--EKKGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCK 363
>At1g43090.1 68414.m04964 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67)
(Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea
mays}; contains Pfam profile PF00295: Glycosyl
hydrolases family 28 (polygalacturonases)
Length = 444
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +1
Query: 346 CTQPPMETKMELXKXKHVYVFNK*IKNVFNVCNEFEDINFLCLQPLECK 492
C PP E E HV + + +KN++ N +N C + CK
Sbjct: 317 CPHPPCEH--EKKGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCK 363
>At1g43080.1 68414.m04963 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67)
(Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea
mays}; contains Pfam profile PF00295: Glycosyl
hydrolases family 28 (polygalacturonases)
Length = 404
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +1
Query: 346 CTQPPMETKMELXKXKHVYVFNK*IKNVFNVCNEFEDINFLCLQPLECK 492
C PP E E HV + + +KN++ N +N C + CK
Sbjct: 317 CPHPPCEH--EKKGESHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCK 363
>At1g07700.3 68414.m00829 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 217
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 27 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMI 125
K D+L + L ++ + LVV+DF T CG CK I
Sbjct: 104 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYI 138
>At1g07700.2 68414.m00827 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 171
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 27 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMI 125
K D+L + L ++ + LVV+DF T CG CK I
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYI 125
>At1g07700.1 68414.m00828 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 204
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 27 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMI 125
K D+L + L ++ + LVV+DF T CG CK I
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYI 125
>At4g31240.2 68417.m04435 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 4.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 72 KLVVIDFMATWCGPCKMIGPKL 137
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
>At4g31240.1 68417.m04434 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 4.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 72 KLVVIDFMATWCGPCKMIGPKL 137
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
>At5g61340.1 68418.m07697 expressed protein
Length = 326
Score = 27.5 bits (58), Expect = 5.4
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -3
Query: 464 KLISSN-SLQTLKTFFIHLLKTYTC 393
KL+S+N S + F++ LLKTY C
Sbjct: 108 KLLSNNHSADSSSVFYLRLLKTYVC 132
>At5g51290.1 68418.m06358 ceramide kinase-related contains weak
similarity to ceramide kinases (GI:21624342) [Mus
musculus]
Length = 608
Score = 27.5 bits (58), Expect = 5.4
Identities = 15/25 (60%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -3
Query: 215 AGDVLALI-NVHLHNYDGI*HFGGD 144
A DV+A I N LH YDGI GGD
Sbjct: 207 AFDVMASIQNKELHTYDGIIAVGGD 231
>At4g13760.1 68417.m02135 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67)
(Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea
mays}; contains PF00295: Glycosyl hydrolases family 28
(polygalacturonases)
Length = 375
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = +1
Query: 346 CTQPPMETKMELXKXKHVYVFNK*IKNVFNVCNEFEDINFLCLQPLECK 492
C PP E + + HV + N +KN++ +N C + CK
Sbjct: 288 CPHPPCEHEQK--GESHVQIQNLKLKNIYGTSKNKVAVNLQCSKRFPCK 334
>At4g02330.1 68417.m00317 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 573
Score = 27.5 bits (58), Expect = 5.4
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -2
Query: 354 LRTTLVSIYLCLRIVVLSLSTLAPENSSS 268
L+ LV+++L L+ + ++ TL P NSSS
Sbjct: 4 LKLFLVTLFLSLQTLFIASQTLLPSNSSS 32
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 36 DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 149
DD+K+ + A VI++ A+WCG C I P +++
Sbjct: 37 DDIKSSKSPA-----VINYGASWCGVCSQILPAFRKLS 69
>At2g15460.1 68415.m01768 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67)
(Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea
mays}; contains Pfam profile PF00295: Glycosyl
hydrolases family 28 (polygalacturonases)
Length = 402
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +1
Query: 346 CTQPPMETKMELXKXKHVYVFNK*IKNVFNVCNEFEDINFLCLQPLECK 492
C PP E E HV + N +KN++ +N C + CK
Sbjct: 317 CPHPPCEH--ERKGESHVQIQNLKLKNIYGTSKNKVAVNLQCSKIFPCK 363
>At2g15450.1 68415.m01767 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
SP|P35339 Exopolygalacturonase precursor (EC 3.2.1.67)
(Pectinase) (Galacturan 1,4-alpha-galacturonidase) {Zea
mays}; contains Pfam profile PF00295: Glycosyl
hydrolases family 28 (polygalacturonases)
Length = 404
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +1
Query: 346 CTQPPMETKMELXKXKHVYVFNK*IKNVFNVCNEFEDINFLCLQPLECK 492
C PP E E HV + N +KN++ +N C + CK
Sbjct: 317 CPHPPCEH--ERKGESHVQIQNLKLKNIYGTSKNKVAVNLQCSKIFPCK 363
>At4g12050.1 68417.m01917 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 339
Score = 26.6 bits (56), Expect = 9.4
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
Frame = +3
Query: 3 KPKMSIHI-KDSDD-LKTRLAEAGDKLVVIDFMATWC-----GPCKMIG 128
KPK I I +DS + L+T + E GD ++D MAT+ G C M G
Sbjct: 130 KPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVMSG 178
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 26.6 bits (56), Expect = 9.4
Identities = 8/35 (22%), Positives = 21/35 (60%)
Frame = +3
Query: 51 RLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 155
+L +++++ + + CGPC+ + P L+++ E
Sbjct: 436 KLYHESPRVILVLYTSPTCGPCRTLKPILNKVVDE 470
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,758,403
Number of Sequences: 28952
Number of extensions: 162147
Number of successful extensions: 499
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 888318720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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