Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0904
(534 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 137 5e-33
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 1e-32
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 133 1e-31
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 105 2e-23
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 71 5e-13
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 44 8e-05
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 3e-04
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.59
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_6723| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_52667| Best HMM Match : MRP-L47 (HMM E-Value=0.0013) 29 1.8
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 1.8
SB_2538| Best HMM Match : YTV (HMM E-Value=0.0015) 29 2.4
SB_14182| Best HMM Match : Cecropin (HMM E-Value=3.6) 29 3.2
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 28 4.2
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 28 4.2
SB_45192| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_50518| Best HMM Match : 7tm_1 (HMM E-Value=7.8e-32) 27 7.3
SB_6045| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 137 bits (332), Expect = 5e-33
Identities = 63/67 (94%), Positives = 65/67 (97%)
Frame = +3
Query: 54 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 233
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 234 MNPNNTI 254
MNP NT+
Sbjct: 61 MNPENTV 67
Score = 118 bits (285), Expect = 2e-27
Identities = 54/82 (65%), Positives = 64/82 (78%)
Frame = +2
Query: 239 PQQHNIDAKRLIGRKFEDATVQADMKHWPFEVXSDGGKPKIKVAYKGEDKTFFPEEVSSM 418
P+ DAKRLIGRKF+D V DM HWPF V +G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 419 VLTKMKETAEAYLGKTVQNAVI 484
VLTKMKETAEAYLG V +AV+
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVV 144
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 136 bits (329), Expect = 1e-32
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 233
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 234 MNPNNTI 254
MNP NTI
Sbjct: 61 MNPTNTI 67
Score = 93.9 bits (223), Expect = 7e-20
Identities = 55/107 (51%), Positives = 64/107 (59%), Gaps = 25/107 (23%)
Frame = +2
Query: 239 PQQHNIDAKRLIGRKFEDATVQADMKHWPFEVXSDGGKPKIKVAYKGEDKTFFPEEV--- 409
P DAKRLIGR+F+D V+ DMKHW FEV ++ G+PK+KV YKGE KTFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 410 ----------------------SSMVLTKMKETAEAYLGKTVQNAVI 484
SSMVL KMKETAEAYLG V +AV+
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVV 169
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +2
Query: 404 EVSSMVLTKMKETAEAYLGKTVQNAVI 484
++SSMVL KMKETAEAYLG V +AV+
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVV 237
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 133 bits (321), Expect = 1e-31
Identities = 60/67 (89%), Positives = 64/67 (95%)
Frame = +3
Query: 54 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 233
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 234 MNPNNTI 254
+NP NTI
Sbjct: 61 LNPENTI 67
Score = 119 bits (287), Expect = 1e-27
Identities = 56/82 (68%), Positives = 67/82 (81%)
Frame = +2
Query: 239 PQQHNIDAKRLIGRKFEDATVQADMKHWPFEVXSDGGKPKIKVAYKGEDKTFFPEEVSSM 418
P+ DAKRLIGR+++DATVQ+DMK WPF++ SD KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 419 VLTKMKETAEAYLGKTVQNAVI 484
VL KMKETAEAYLG+ V +AVI
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVI 144
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 105 bits (252), Expect = 2e-23
Identities = 48/62 (77%), Positives = 55/62 (88%), Gaps = 1/62 (1%)
Frame = +3
Query: 72 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 248
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 249 TI 254
T+
Sbjct: 764 TV 765
Score = 97.9 bits (233), Expect = 5e-21
Identities = 47/82 (57%), Positives = 60/82 (73%)
Frame = +2
Query: 239 PQQHNIDAKRLIGRKFEDATVQADMKHWPFEVXSDGGKPKIKVAYKGEDKTFFPEEVSSM 418
P+ DAKRLIGR ++D +VQ D+K +PF+V KP ++V K E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 419 VLTKMKETAEAYLGKTVQNAVI 484
VLTKMKETAEAYLGK V +AV+
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVV 842
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 71.3 bits (167), Expect = 5e-13
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Frame = +3
Query: 60 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 233
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 234 MNPNNTI 254
+NP NTI
Sbjct: 90 INPKNTI 96
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +2
Query: 239 PQQHNIDAKRLIGRKFEDATVQADMKHWPFEVXSD-GGKPKIKVAYKGEDKTFFPEEVSS 415
P+ DAKR IG+ F + K + F V +D G V KG PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 416 MVLTKMKETAEAYLGKTVQNAVI 484
V+ K++ AE L TV AV+
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVM 174
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 59.7 bits (138), Expect = 1e-09
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 263 KRLIGRKFEDATVQADMKHWPFEVXS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKE 439
KR IGRKF D VQ ++ H P++V I+V Y G+ + F PE+V +M+ T++K
Sbjct: 127 KRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKT 186
Query: 440 TAEAYLGKTVQNAVI 484
TAE L V + VI
Sbjct: 187 TAEIALKTKVTDCVI 201
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +3
Query: 72 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 227
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 44.0 bits (99), Expect = 8e-05
Identities = 20/42 (47%), Positives = 31/42 (73%)
Frame = +2
Query: 359 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVI 484
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVI
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVI 43
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.9 bits (94), Expect = 3e-04
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +3
Query: 123 GKVEIIANDQGNRTTPSYVAFTDTERLI--GDAAKNQVAMNPNN-TISMPNVSSDVSSKM 293
G IIAND G+R TP+ VAF+DTE+LI +V N N +S V + + KM
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLIDKDGLPYYEVESNERNIQVSPKEVINMIYKKM 142
Query: 294 L 296
L
Sbjct: 143 L 143
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.59
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +3
Query: 132 EIIANDQGNRTTPSYVAFT-DTERL 203
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -1
Query: 447 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLXTSKGQCFMSACTVASSNLRPMR 268
S F+F ST + +S +KV+ SPL + + P+ G S C V + + P
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNVQNLSRCPKI 1167
Query: 267 RLASIL 250
A++L
Sbjct: 1168 SNATVL 1173
>SB_6723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 629
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -3
Query: 511 SLKVTREPVNXCILHS---FAKISFGSFLHFRKHHGTDFL 401
S+K+ ++ VN C++H I+FG+ H RK GT L
Sbjct: 144 SVKLNKQVVNGCLVHKPKGRRHITFGNTAHLRKIRGTSRL 183
>SB_52667| Best HMM Match : MRP-L47 (HMM E-Value=0.0013)
Length = 119
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +2
Query: 263 KRLIGRKFEDATVQADMKHWPFEVXSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKET 442
K ++G + E A + + WPF+V + K + K P + +++ +TKM+E
Sbjct: 42 KLVLGER-ERAIQELSQQQWPFDVQDPALESTSKDLKETPIKETSPVQAATLNMTKMEEN 100
Query: 443 AEAYLGKT 466
+ G T
Sbjct: 101 QQELSGNT 108
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 240 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 142
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_2538| Best HMM Match : YTV (HMM E-Value=0.0015)
Length = 779
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/72 (25%), Positives = 37/72 (51%)
Frame = +3
Query: 66 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 245
P G+DL G+FQ GK+++ + + +++A + +GDAAK ++ +
Sbjct: 547 PTGGLDLS------GMFQ-GKIQVASTAESEAGRKAFLAECERNPNLGDAAKMKLESCLS 599
Query: 246 NTISMPNVSSDV 281
+ +S N+ D+
Sbjct: 600 DLVSTANIFKDL 611
>SB_14182| Best HMM Match : Cecropin (HMM E-Value=3.6)
Length = 65
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -3
Query: 532 LWLVLEKSLKVTREPVNXCILHSFAKISFGSFLHFRKHHGTDFLG 398
LW V+E+S+K T + ++ I+ + A+ S H KH T LG
Sbjct: 15 LWPVIERSIKRTHDGIHRPIIAALAEKSREVRGHENKHDQTGGLG 59
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 28.3 bits (60), Expect = 4.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 261 ASILCCWGSSPPGSWRH 211
A ++CC G SP WRH
Sbjct: 394 ARVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 28.3 bits (60), Expect = 4.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 261 ASILCCWGSSPPGSWRH 211
A ++CC G SP WRH
Sbjct: 169 ARVVCCQGDSPSPRWRH 185
>SB_45192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 445 RSLSWQNCAECSXSRVPA*LSMTSPRQAT 531
R L W+ EC SR P L M+ P+ T
Sbjct: 21 RFLLWEGLEECLDSRPPMRLDMSGPKPTT 49
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 353 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVI 484
P +K Y+ D TF PEE+ M+L + E + +++ V+
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVL 110
>SB_50518| Best HMM Match : 7tm_1 (HMM E-Value=7.8e-32)
Length = 375
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 7/44 (15%)
Frame = +2
Query: 170 VLCCVHRHRASHRRCRQEPGGDEPQQ-------HNIDAKRLIGR 280
+LCC R + RRCR E HN+ AK L+ R
Sbjct: 308 ILCCGKRSKEGKRRCRYLTTSSESSDRQTNMSGHNMSAKELLSR 351
>SB_6045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 27.1 bits (57), Expect = 9.6
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -1
Query: 408 TSSG--KKVLSSPLYATLILGLPPSLXTSKGQCFMSACTVASSNLRPMR-RLASILCCWG 238
TS G + +S+P A LGL PS +S Q +S+ L+P++ S+ +G
Sbjct: 14 TSRGYTRSFVSNPYSALAGLGLNPSALSSSDQSALSSLYSGLLGLKPLQSNKMSLAQMYG 73
Query: 237 SSP 229
SP
Sbjct: 74 GSP 76
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,054,316
Number of Sequences: 59808
Number of extensions: 403295
Number of successful extensions: 1137
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1203486867
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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