Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0904
(534 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 132 2e-31
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 132 2e-31
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 116 1e-26
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 116 1e-26
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 115 2e-26
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 105 2e-23
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 105 2e-23
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 104 3e-23
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 67 9e-12
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 67 9e-12
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 62 2e-10
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 62 2e-10
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 55 3e-08
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 48 3e-06
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 37 0.010
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z75541-6|CAA99857.2| 644|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF440800-1|AAL28139.1| 644|Caenorhabditis elegans transcription... 29 2.8
AC025727-3|AAG23386.1| 228|Caenorhabditis elegans Hypothetical ... 27 6.4
Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical p... 27 8.5
Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical pr... 27 8.5
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 27 8.5
U41007-6|AAA82269.2| 348|Caenorhabditis elegans Hypothetical pr... 27 8.5
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 27 8.5
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 132 bits (318), Expect = 2e-31
Identities = 61/67 (91%), Positives = 64/67 (95%)
Frame = +3
Query: 54 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 233
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 234 MNPNNTI 254
MNP+NT+
Sbjct: 61 MNPHNTV 67
Score = 120 bits (290), Expect = 5e-28
Identities = 56/83 (67%), Positives = 68/83 (81%), Gaps = 1/83 (1%)
Frame = +2
Query: 239 PQQHNIDAKRLIGRKFEDATVQADMKHWPFEVXS-DGGKPKIKVAYKGEDKTFFPEEVSS 415
P DAKRLIGRKF+D VQ+DMKHWPF+V S +G KPK++V YKGE+K F PEE+SS
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISS 122
Query: 416 MVLTKMKETAEAYLGKTVQNAVI 484
MVL KMKETAEA+LG TV++AV+
Sbjct: 123 MVLLKMKETAEAFLGTTVKDAVV 145
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 132 bits (318), Expect = 2e-31
Identities = 61/67 (91%), Positives = 64/67 (95%)
Frame = +3
Query: 54 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 233
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 234 MNPNNTI 254
MNP+NT+
Sbjct: 61 MNPHNTV 67
Score = 116 bits (278), Expect = 1e-26
Identities = 54/83 (65%), Positives = 67/83 (80%), Gaps = 1/83 (1%)
Frame = +2
Query: 239 PQQHNIDAKRLIGRKFEDATVQADMKHWPFEVXS-DGGKPKIKVAYKGEDKTFFPEEVSS 415
P DAKRLIGRKF+D VQ+DMKHWPF+V S +G KPK++V YKGE+K F PEE+SS
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISS 122
Query: 416 MVLTKMKETAEAYLGKTVQNAVI 484
MVL KMK+TAEA+L TV++AV+
Sbjct: 123 MVLLKMKKTAEAFLEPTVKDAVV 145
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 116 bits (278), Expect = 1e-26
Identities = 49/67 (73%), Positives = 60/67 (89%)
Frame = +3
Query: 54 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 233
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 234 MNPNNTI 254
NP NT+
Sbjct: 61 RNPENTV 67
Score = 109 bits (263), Expect = 9e-25
Identities = 51/82 (62%), Positives = 63/82 (76%)
Frame = +2
Query: 239 PQQHNIDAKRLIGRKFEDATVQADMKHWPFEVXSDGGKPKIKVAYKGEDKTFFPEEVSSM 418
P+ DAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S+M
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAM 122
Query: 419 VLTKMKETAEAYLGKTVQNAVI 484
VL KMKETAE YLG TV++AVI
Sbjct: 123 VLQKMKETAETYLGHTVKDAVI 144
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 116 bits (278), Expect = 1e-26
Identities = 49/67 (73%), Positives = 60/67 (89%)
Frame = +3
Query: 54 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 233
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 234 MNPNNTI 254
NP NT+
Sbjct: 61 RNPENTV 67
Score = 109 bits (263), Expect = 9e-25
Identities = 51/82 (62%), Positives = 63/82 (76%)
Frame = +2
Query: 239 PQQHNIDAKRLIGRKFEDATVQADMKHWPFEVXSDGGKPKIKVAYKGEDKTFFPEEVSSM 418
P+ DAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S+M
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAM 122
Query: 419 VLTKMKETAEAYLGKTVQNAVI 484
VL KMKETAE YLG TV++AVI
Sbjct: 123 VLQKMKETAETYLGHTVKDAVI 144
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 115 bits (277), Expect = 2e-26
Identities = 49/67 (73%), Positives = 60/67 (89%)
Frame = +3
Query: 54 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 233
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 234 MNPNNTI 254
NP NT+
Sbjct: 61 RNPENTV 67
Score = 103 bits (247), Expect = 8e-23
Identities = 48/82 (58%), Positives = 62/82 (75%)
Frame = +2
Query: 239 PQQHNIDAKRLIGRKFEDATVQADMKHWPFEVXSDGGKPKIKVAYKGEDKTFFPEEVSSM 418
P+ DAKRLIGR+F++ TVQ+D+KHWPF V GKP ++V KGE + F EE+S+M
Sbjct: 63 PENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEISAM 122
Query: 419 VLTKMKETAEAYLGKTVQNAVI 484
VL KMKETAEA LG +V++AVI
Sbjct: 123 VLQKMKETAEAVLGHSVRDAVI 144
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 105 bits (253), Expect = 2e-23
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = +2
Query: 239 PQQHNIDAKRLIGRKFEDATVQADMKHWPFEVXSDGGKPKIKVAYKGEDKTFFPEEVSSM 418
P+ DAKRLIGR + D TVQAD+KHWPF+V KP ++V ++K F PEEVS+M
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAM 153
Query: 419 VLTKMKETAEAYLGKTVQNAVI 484
VL KMKE AE+YLGK V+NAV+
Sbjct: 154 VLVKMKEIAESYLGKEVKNAVV 175
Score = 102 bits (244), Expect = 2e-22
Identities = 47/63 (74%), Positives = 56/63 (88%), Gaps = 2/63 (3%)
Frame = +3
Query: 72 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNPN 245
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 246 NTI 254
NTI
Sbjct: 96 NTI 98
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 105 bits (253), Expect = 2e-23
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = +2
Query: 239 PQQHNIDAKRLIGRKFEDATVQADMKHWPFEVXSDGGKPKIKVAYKGEDKTFFPEEVSSM 418
P+ DAKRLIGR + D TVQAD+KHWPF+V KP ++V ++K F PEEVS+M
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAM 153
Query: 419 VLTKMKETAEAYLGKTVQNAVI 484
VL KMKE AE+YLGK V+NAV+
Sbjct: 154 VLVKMKEIAESYLGKEVKNAVV 175
Score = 102 bits (244), Expect = 2e-22
Identities = 47/63 (74%), Positives = 56/63 (88%), Gaps = 2/63 (3%)
Frame = +3
Query: 72 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNPN 245
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 246 NTI 254
NTI
Sbjct: 96 NTI 98
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 104 bits (250), Expect = 3e-23
Identities = 49/63 (77%), Positives = 56/63 (88%), Gaps = 2/63 (3%)
Frame = +3
Query: 72 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNPN 245
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92
Query: 246 NTI 254
NTI
Sbjct: 93 NTI 95
Score = 99 bits (238), Expect = 1e-21
Identities = 45/82 (54%), Positives = 58/82 (70%)
Frame = +2
Query: 239 PQQHNIDAKRLIGRKFEDATVQADMKHWPFEVXSDGGKPKIKVAYKGEDKTFFPEEVSSM 418
P+ DAKRLIGR + + TVQ D+KHWPF++ KP ++V E K F PEEVS+M
Sbjct: 91 PENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAM 150
Query: 419 VLTKMKETAEAYLGKTVQNAVI 484
VLTKMK+ AE+YLG V+NAV+
Sbjct: 151 VLTKMKQIAESYLGHEVKNAVV 172
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 66.9 bits (156), Expect = 9e-12
Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = +3
Query: 60 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 236
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 237 NPNNTI 254
N NT+
Sbjct: 90 NSANTL 95
Score = 63.3 bits (147), Expect = 1e-10
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +2
Query: 263 KRLIGRKFEDATVQADMKHWPFE-VXSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKE 439
KRLIGR++ED VQ D+K P++ V + G ++ + K + P +V + VL KMKE
Sbjct: 99 KRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA----QGKEYPPSQVGAFVLMKMKE 154
Query: 440 TAEAYLGKTVQNAVI 484
TAE+YLG TV N V+
Sbjct: 155 TAESYLGTTVNNPVV 169
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 66.9 bits (156), Expect = 9e-12
Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = +3
Query: 60 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 236
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 237 NPNNTI 254
N NT+
Sbjct: 90 NSANTL 95
Score = 66.5 bits (155), Expect = 1e-11
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +2
Query: 263 KRLIGRKFEDATVQADMKHWPFE-VXSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKE 439
KRLIGR++ED VQ D+K P++ V + G ++ + K + P +V + VL KMKE
Sbjct: 99 KRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA----QGKVYSPSQVGAFVLMKMKE 154
Query: 440 TAEAYLGKTVQNAVI 484
TAE+YLG TV NAV+
Sbjct: 155 TAESYLGTTVNNAVV 169
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 62.1 bits (144), Expect = 2e-10
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +3
Query: 69 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 245
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ + N
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 246 NTISMPNV 269
+ + +
Sbjct: 62 SLFDVKRI 69
Score = 59.7 bits (138), Expect = 1e-09
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +2
Query: 257 DAKRLIGRKFEDATVQADMKHWPFEV-XSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKM 433
D KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++L +
Sbjct: 65 DVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLILRCL 124
Query: 434 KETAEAYLGKTVQNAVI 484
K AE LG V++AVI
Sbjct: 125 KYNAERKLGLEVKSAVI 141
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 62.1 bits (144), Expect = 2e-10
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +3
Query: 69 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 245
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ + N
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 246 NTISMPNV 269
+ + +
Sbjct: 62 SLFDVKRI 69
Score = 59.7 bits (138), Expect = 1e-09
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +2
Query: 257 DAKRLIGRKFEDATVQADMKHWPFEV-XSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKM 433
D KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++L +
Sbjct: 65 DVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLILRCL 124
Query: 434 KETAEAYLGKTVQNAVI 484
K AE LG V++AVI
Sbjct: 125 KYNAERKLGLEVKSAVI 141
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 55.2 bits (127), Expect = 3e-08
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Frame = +2
Query: 236 EPQQHN-----IDAKRLIGRKFE--DATVQADMKHWPFEVXSDG-GKPKIKVAYKGEDKT 391
E Q+HN DAKR IGR FE + +D K +PF++ D GK ++ K
Sbjct: 89 EQQEHNPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKN 148
Query: 392 FFPEEVSSMVLTKMKETAEAYLGKTVQNAVI 484
+PEE+ S+++ +K A +LG T+ VI
Sbjct: 149 VYPEEIGSLIIGYLKSAAAKHLGVTLGQVVI 179
Score = 50.8 bits (116), Expect = 6e-07
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Frame = +3
Query: 45 KYKMAKAPA--VGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTER-LIG 209
KY + P GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 210 DAAKNQVAMNPNNTI 254
A Q NP TI
Sbjct: 85 TRATEQQEHNPKRTI 99
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 48.4 bits (110), Expect = 3e-06
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +3
Query: 72 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 251
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V N NT
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNIKNT 63
Query: 252 I 254
+
Sbjct: 64 V 64
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +2
Query: 254 IDAKRLIGRKFEDATVQADMKHWPFEVXS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 430
I+ K LIGRKF D Q + P +V ++V+Y GE TF PE+V + +LTK
Sbjct: 65 INFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAALLTK 124
Query: 431 MKETAEAYLG--KTVQNAVI 484
++ E+ L K V + V+
Sbjct: 125 LRTIVESQLSDVKKVSDCVL 144
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 69 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAA 218
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAA 76
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 30.7 bits (66), Expect = 0.69
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 269 LIGRKFEDATVQADMKHWPFEVXS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETA 445
+I RK D K +PF D + + YK E+K + E + +M+L K+
Sbjct: 80 MIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETLLAMILWNAKKVT 137
Query: 446 EAYLGKTVQNAVI 484
EAY +TV++ VI
Sbjct: 138 EAYADQTVKDVVI 150
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 30.7 bits (66), Expect = 0.69
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 269 LIGRKFEDATVQADMKHWPFEVXS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETA 445
+I RK D K +PF D + + YK E+K + E + +M+L K+
Sbjct: 96 MIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETLLAMILWNAKKVT 153
Query: 446 EAYLGKTVQNAVI 484
EAY +TV++ VI
Sbjct: 154 EAYADQTVKDVVI 166
>Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical
protein T08G11.2 protein.
Length = 282
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 161 DHSVLCCVHRHRASHRRCRQEPGGDEPQQHNI 256
D V+CCVH R S+ + Q+ D+ Q N+
Sbjct: 23 DGEVVCCVHGRRCSYGKGNQDGKRDDNQYVNL 54
>Z75541-6|CAA99857.2| 644|Caenorhabditis elegans Hypothetical
protein F52B5.5a protein.
Length = 644
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -3
Query: 520 LEKSLKVTREPVNXCILHSFAK--ISFGSFLHFRK-HHGTDFLGEKGFVFTLICY 365
+E +++ R V C H+ + F SF + R H + EKG FTLI Y
Sbjct: 293 VEYAIRNPRSDVMKCRSHTEREQHFPFDSFFYIRNSEHEFSYSAEKGSTFTLIMY 347
>AF440800-1|AAL28139.1| 644|Caenorhabditis elegans transcription
factor CEP-1 protein.
Length = 644
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -3
Query: 520 LEKSLKVTREPVNXCILHSFAK--ISFGSFLHFRK-HHGTDFLGEKGFVFTLICY 365
+E +++ R V C H+ + F SF + R H + EKG FTLI Y
Sbjct: 293 VEYAIRNPRSDVMKCRSHTEREQHFPFDSFFYIRNSEHEFSYSAEKGSTFTLIMY 347
>AC025727-3|AAG23386.1| 228|Caenorhabditis elegans Hypothetical
protein Y73E7A.5 protein.
Length = 228
Score = 27.5 bits (58), Expect = 6.4
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Frame = -3
Query: 475 ILHSFAKISFGSFLH---FRKHHGTDFLGEKGFVFT-----LICYLDLRFASITXNLERP 320
I+ ++S+ S L FRK H FLGE ++ T ++ +L++ +T +L R
Sbjct: 11 IIGDIFRLSYQSALSHPLFRKCHFLKFLGEGSYITTEDMKFILKNFNLKYGFLTRSLRRT 70
Query: 319 VLHVGLHSSIFELTSDETFGIDI 251
+ + L +I L +++ G+ +
Sbjct: 71 KIDIKLLVNIPRLDFEKSPGLTL 93
>Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical
protein K07F5.14 protein.
Length = 422
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 215 RQEPGGDEPQQHNIDAKRLIGRKFEDATVQAD 310
++ GD+P +IGRK++D V+ D
Sbjct: 278 KERKDGDDPSTGGFSFLSMIGRKYDDEAVEDD 309
>Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical
protein T09B9.5 protein.
Length = 363
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 160 LLPWSLAMISTFPCWKTPTQEY-VVPRSIPTAGAFA 56
+LP A TFPC + EY +VP +P+A A
Sbjct: 287 VLPMRDAATRTFPCMLSALPEYSLVPPQVPSASTSA 322
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 206 RRCRQEPGGDEPQQHNIDAK 265
R + P GDEP+QH I+ K
Sbjct: 4602 REVYESPEGDEPEQHYIETK 4621
>U41007-6|AAA82269.2| 348|Caenorhabditis elegans Hypothetical
protein C33H5.10 protein.
Length = 348
Score = 27.1 bits (57), Expect = 8.5
Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Frame = +2
Query: 41 LKIQNGKST--RSRNRSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRC 214
L IQ S R R +S H L P GG + G + S H H +
Sbjct: 241 LYIQKASSMDRRERTKSKQHPLSIMDAPKDRGGRTEEMVGVKQESFRQQQHTFDRQHSQN 300
Query: 215 RQEPGGDEPQQH 250
RQ+ D P+ H
Sbjct: 301 RQKSTFDRPKTH 312
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 206 RRCRQEPGGDEPQQHNIDAK 265
R + P GDEP+QH I+ K
Sbjct: 4602 REVYESPEGDEPEQHYIETK 4621
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,945,632
Number of Sequences: 27780
Number of extensions: 280988
Number of successful extensions: 860
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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