Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0902
         (510 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9FWW2 Cluster: T28K15.14 protein; n=1; Arabidopsis tha...    33   2.8  
UniRef50_Q094Q1 Cluster: Putative uncharacterized protein; n=1; ...    32   6.6  

>UniRef50_Q9FWW2 Cluster: T28K15.14 protein; n=1; Arabidopsis
           thaliana|Rep: T28K15.14 protein - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 483

 Score = 33.5 bits (73), Expect = 2.8
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +1

Query: 397 PTSQTTDCRNQNSTRFQLRRSTSPRR*QSGMRLSL 501
           P S T+ C  +N++R + RRS+SPR  Q   R  L
Sbjct: 252 PASDTSCCTTENNSRIESRRSSSPRALQPSCRTRL 286


>UniRef50_Q094Q1 Cluster: Putative uncharacterized protein; n=1;
           Stigmatella aurantiaca DW4/3-1|Rep: Putative
           uncharacterized protein - Stigmatella aurantiaca DW4/3-1
          Length = 457

 Score = 32.3 bits (70), Expect = 6.6
 Identities = 14/59 (23%), Positives = 26/59 (44%)
 Frame = +1

Query: 64  DKELIMENSGGNMCRCCASEGVYKDLNTTYHWMGEEEVYGDMLKDCFNVQLSVPESSDG 240
           + + ++  +GG  C   A  G Y   N    W+  +     +   C ++Q   PE++DG
Sbjct: 220 ENQQVVSLTGGGYCGWVAPVGSYNPFNQAGAWLQLQYRSSTLPSSCLDIQAIQPEATDG 278


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,343,759
Number of Sequences: 1657284
Number of extensions: 8410385
Number of successful extensions: 24020
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24014
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)