Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0902
         (510 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    25   0.30 
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   1.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.6  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   2.8  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   2.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   4.8  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    21   4.8  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   6.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   6.4  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 25.4 bits (53), Expect = 0.30
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 157 NGKWYSSPYTHLQRHNIDTYYRHCSP 80
           +G+W  SP  H +++   TYY    P
Sbjct: 73  HGQWNYSPDNHFEQYPNPTYYNLADP 98


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 509 GFLRLNLIPDCHRLGDVLRLNWN 441
           G +  N+ P    +GD+L +NWN
Sbjct: 437 GMMNWNM-PSTSVVGDMLNMNWN 458


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 255 CITQLRNAINFKKQVLLTEEQFK 323
           C++QL+NA++  K +L  +   K
Sbjct: 469 CVSQLKNALSIDKGILREKPDVK 491


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -1

Query: 168 FAHPMVSGIQVLIHTFRGTTSTHITATVLHYEFFIYHTIQNR 43
           F + +    Q +     G  +T IT  +  YE  +  TIQ+R
Sbjct: 282 FDNDIKMAAQAIAFFSAGNDTTSITLALTCYELSLNKTIQDR 323


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -2

Query: 278 GVTELGYATSHMPPSELSGTLNCTLKQSFNMSPYTSSS 165
           G T   ++T   P + +S T+NC    S    PY  S+
Sbjct: 301 GPTYSTWSTVQTPTTVMSPTINCWSLTSSPPPPYQISA 338


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 191 NMSPYTSSSPIQW 153
           N+SP T+SSP  W
Sbjct: 298 NLSPKTNSSPDLW 310


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 194 FNMSPYTSSSPIQW 153
           F MS Y  S+PI W
Sbjct: 253 FYMSAYLISNPIMW 266


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 493 ISSPTVTVSATCSVLIGT 440
           ++S   TV A C+V+IGT
Sbjct: 75  LASGDYTVPAGCTVVIGT 92


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 373 LLTMTVQMPTSQTTDCRNQNSTRFQLRRSTSP 468
           +++ T   PT+ TT  R   +T+F  + ST P
Sbjct: 155 VISSTPLPPTTSTTT-RTTLTTKFTTKPSTKP 185


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 401 VGICTVIVSKSFHFN 357
           +G+   I SKSFH N
Sbjct: 45  IGVVVSIYSKSFHRN 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,500
Number of Sequences: 336
Number of extensions: 2305
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)